دورية أكاديمية

Z-Form Extracellular DNA in Pediatric CRS May Provide a Mechanism for Recalcitrance to Treatment.

التفاصيل البيبلوغرافية
العنوان: Z-Form Extracellular DNA in Pediatric CRS May Provide a Mechanism for Recalcitrance to Treatment.
المؤلفون: Hofer LK; Center for Microbial Pathogenesis, Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus, Ohio, U.S.A., Jurcisek JA; Center for Microbial Pathogenesis, Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus, Ohio, U.S.A., Elmaraghy C; The Ohio State University College of Medicine, Columbus, Ohio, U.S.A.; Department of Otolaryngology-Head and Neck Surgery, The Ohio State University Wexner Medical Center, Columbus, Ohio, U.S.A.; Department of Pediatric Otolaryngology, Nationwide Children's Hospital, Columbus, Ohio, U.S.A., Goodman SD; Center for Microbial Pathogenesis, Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus, Ohio, U.S.A.; The Ohio State University College of Medicine, Columbus, Ohio, U.S.A., Bakaletz LO; Center for Microbial Pathogenesis, Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus, Ohio, U.S.A.; The Ohio State University College of Medicine, Columbus, Ohio, U.S.A.
المصدر: The Laryngoscope [Laryngoscope] 2024 Apr; Vol. 134 (4), pp. 1564-1571. Date of Electronic Publication: 2023 Aug 19.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Wiley-Blackwell Country of Publication: United States NLM ID: 8607378 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1531-4995 (Electronic) Linking ISSN: 0023852X NLM ISO Abbreviation: Laryngoscope Subsets: MEDLINE
أسماء مطبوعة: Publication: <2009- >: Philadelphia, PA : Wiley-Blackwell
Original Publication: St. Louis, Mo. : [s.n., 1896-
مواضيع طبية MeSH: DNA, Z-Form* , DNA, B-Form* , Sinusitis*/surgery , Rhinitis*/surgery, Humans ; Child ; Integration Host Factors ; Biofilms ; Chronic Disease
مستخلص: Objectives: We examined sinus mucosal samples recovered from pediatric chronic rhinosinusitis (CRS) patients for the presence of Z-form extracellular DNA (eDNA) due to its recently elucidated role in pathogenesis of disease. Further, we immunolabeled these specimens for the presence of both members of the bacterial DNA-binding DNABII protein family, integration host factor (IHF) and histone-like protein (HU), due to their known role in converting common B-DNA to the rare Z-form.
Methods: Sinus mucosa samples recovered from 20 patients during functional endoscopic sinus surgery (FESS) were immunolabelled for B- and Z-DNA, as well as for both bacterial DNABII proteins.
Results: Nineteen of 20 samples (95%) included areas rich in eDNA, with the majority in the Z-form. Areas positive for B-DNA were restricted to the most distal regions of the mucosal specimen. Labeling for both DNABII proteins was observed on B- and Z-DNA, which aligned with the role of these proteins in the B-to-Z DNA conversion.
Conclusions: Abundant Z-form eDNA in culture-positive pediatric CRS samples suggested that bacterial DNABII proteins were responsible for the conversion of eukaryotic B-DNA that had been released into the luminal space by PMNs during NETosis, to the Z-form. The presence of both DNABII proteins on B-DNA and Z-DNA supported the known role of these bacterial proteins in the B-to-Z DNA conversion. Given that Z-form DNA both stabilizes the bacterial biofilm and inactivates PMN NET-mediated killing of trapped bacteria, we hypothesize that this conversion may be contributing to the chronicity and recalcitrance of CRS to treatment.
Level of Evidence: NA Laryngoscope, 134:1564-1571, 2024.
(© 2023 The American Laryngological, Rhinological and Otological Society, Inc.)
References: Orlandi RR, Kingdom TT, Smith TL, et al. International consensus statement on allergy and rhinology: rhinosinusitis 2021. Int Forum Allergy Rhinol. 2021;11(3):213-739.
DeConde AS, Soler ZM. Chronic rhinosinusitis: epidemiology and burden of disease. Am J Rhinol Allergy. 2016;30(2):134-139.
Fokkens WJ, Lund VJ, Hopkins C, et al. European position paper on rhinosinusitis and nasal polyps 2020. Rhinology. 2020;58(Suppl S29):1-464.
Dlugaszewska J, Leszczynska M, Lenkowski M, Tatarska A, Pastusiak T, Szyfter W. The pathophysiological role of bacterial biofilms in chronic sinusitis. Eur Arch Otorhinolaryngol. 2016;273(8):1989-1994.
Cryer J, Schipor I, Perloff JR, Palmer JN. Evidence of bacterial biofilms in human chronic sinusitis. ORL J Otorhinolaryngol Relat Spec. 2004;66(3):155-158.
Sanclement JA, Webster P, Thomas J, Ramadan HH. Bacterial biofilms in surgical specimens of patients with chronic rhinosinusitis. Laryngoscope. 2005;115(4):578-582.
Ferguson BJ, Stolz DB. Demonstration of biofilm in human bacterial chronic rhinosinusitis. Am J Rhinol. 2005;19(5):452-457.
Sanderson AR, Leid JG, Hunsaker D. Bacterial biofilms on the sinus mucosa of human subjects with chronic rhinosinusitis. Laryngoscope. 2006;116(7):1121-1126.
Popov G, Aleksandrov R, Petkova V, et al. Analysis of bacterial biofilm formation and MUC5AC and MUC5B expression in chronic rhinosinusitis patients. J Clin Med. 2023;12(5):1808.
Wang X, Du J, Zhao C. Bacterial biofilms are associated with inflammatory cells infiltration and the innate immunity in chronic rhinosinusitis with or without nasal polyps. Inflammation. 2014;37(3):871-879.
Maina IW, Patel NN, Cohen NA. Understanding the role of biofilms and superantigens in chronic rhinosinusitis. Curr Otorhinolaryngol Rep. 2018;6(3):253-262.
Sedaghat AR. Chronic rhinosinusitis. Am Fam Physician. 2017;96(8):500-506.
Hoggard M, Wagner Mackenzie B, Jain R, Taylor MW, Biswas K, Douglas RG. Chronic rhinosinusitis and the evolving understanding of microbial ecology in chronic inflammatory mucosal disease. Clin Microbiol Rev. 2017;30(1):321-348.
CDC. Antibiotic Resistance Threats in the United States. 2019 [Accessed February 21, 2023]. https://www.cdc.gov/drugresistance/pdf/threats-report/2019-ar-threats-report-508.pdf.
Kennedy DW. Functional endoscopic sinus surgery. Technique Arch Otolaryngol. 1985;111(10):643-649.
Musy PY, Kountakis SE. Anatomic findings in patients undergoing revision endoscopic sinus surgery. Am J Otolaryngol. 2004;25(6):418-422.
Smith LF, Brindley PC. Indications, evaluation, complications, and results of functional endoscopic sinus surgery in 200 patients. Otolaryngol Head Neck Surg. 1993;108(6):688-696.
Flemming HC, Wingender J. The biofilm matrix. Nat Rev Microbiol. 2010;8(9):623-633.
Jurcisek JA, Bakaletz LO. Biofilms formed by nontypeable Haemophilus influenzae in vivo contain both double-stranded DNA and type IV pilin protein. J Bacteriol. 2007;189(10):3868-3875.
Idicula WK, Jurcisek JA, Cass ND, et al. Identification of biofilms in post-tympanostomy tube otorrhea. Laryngoscope. 2016;126(8):1946-1951.
Devaraj A, Buzzo J, Rocco CJ, Bakaletz LO, Goodman SD. The DNABII family of proteins is comprised of the only nucleoid associated proteins required for nontypeable Haemophilus influenzae biofilm structure. Microbiology. 2018;7(3):e00563.
Novotny LA, Amer AO, Brockson ME, Goodman SD, Bakaletz LO. Structural stability of Burkholderia cenocepacia biofilms is reliant on eDNA structure and presence of a bacterial nucleic acid binding protein. PloS One. 2013;8(6):e67629.
Hall-Stoodley L, Nistico L, Sambanthamoorthy K, et al. Characterization of biofilm matrix, degradation by DNase treatment and evidence of capsule downregulation in Streptococcus pneumoniae clinical isolates. BMC Microbiol. 2008;8173:173.
Kaplan JB, LoVetri K, Cardona ST, et al. Recombinant human DNase I decreases biofilm and increases antimicrobial susceptibility in staphylococci. J Antibiot (Tokyo). 2012;65(2):73-77.
Koo H, Allan RN, Howlin RP, Stoodley P, Hall-Stoodley L. Targeting microbial biofilms: current and prospective therapeutic strategies. Nat Rev Microbiol. 2017;15(12):740-755.
Saunders SH, Tse ECM, Yates MD, et al. Extracellular DNA promotes efficient extracellular electron transfer by pyocyanin in Pseudomonas aeruginosa biofilms. Cell. 2020;182(4):919-932 e919.
Whitchurch CB, Tolker-Nielsen T, Ragas PC, Mattick JS. Extracellular DNA required for bacterial biofilm formation. Science. 2002;295(5559):1487.
Buzzo JR, Devaraj A, Gloag ES, et al. Z-form extracellular DNA is a structural component of the bacterial biofilm matrix. Cell. 2021;184(23):5740-5758 e5717.
Dumat B, Larsen AF, Wilhelmsson LM. Studying Z-DNA and B- to Z-DNA transitions using a cytosine analogue FRET-pair. Nucleic Acids Res. 2016;44(11):e101.
Ho PS, Kagawa TF, Tseng KH, Schroth GP, Zhou GW. Prediction of a crystallization pathway for Z-DNA hexanucleotides. Science. 1991;254(5034):1003-1006.
Kim SH, Lim SH, Lee AR, et al. Unveiling the pathway to Z-DNA in the protein-induced B-Z transition. Nucleic Acids Res. 2018;46(8):4129-4137.
Rich A, Nordheim A, Wang AH. The chemistry and biology of left-handed Z-DNA. Annu Rev Biochem. 1984;53791-53846:791-846.
Wang AH, Quigley GJ, Kolpak FJ, et al. Molecular structure of a left-handed double helical DNA fragment at atomic resolution. Nature. 1979;282(5740):680-686.
Ramesh N, Brahmachari SK. Structural alteration from non-B to B-form could reflect DNase I hypersensitivity. J Biomol Struct Dyn. 1989;6(5):899-906.
Jamal M, Ahmad W, Andleeb S, et al. Bacterial biofilm and associated infections. J Chin Med Assoc. 2018;81(1):7-11.
Costerton JW, Stewart PS, Greenberg EP. Bacterial biofilms: a common cause of persistent infections. Science. 1999;284(5418):1318-1322.
Dongari-Bagtzoglou A. Pathogenesis of mucosal biofilm infections: challenges and progress. Expert Rev Anti Infect Ther. 2008;6(2):201-208.
Baguley C, Brownlow A, Yeung K, Pratt E, Sacks R, Harvey R. The fate of chronic rhinosinusitis sufferers after maximal medical therapy. Int Forum Allergy Rhinol. 2014;4(7):525-532.
Dejaco D, Riedl D, Giotakis A, Bektic-Tadic L, Kahler P, Riechelmann H. Treatment outcomes in chronic rhinosinusitis refractory to maximal medical therapy: a prospective observational study under real-world conditions. Ear Nose Throat J. 2021;100(2):NP77-NP86.
Boase S, Foreman A, Cleland E, et al. The microbiome of chronic rhinosinusitis: culture, molecular diagnostics and biofilm detection. BMC Infect Dis. 2013;13:210.
Cho DY, Hunter RC, Ramakrishnan VR. The microbiome and chronic rhinosinusitis. Immunol Allergy Clin North Am. 2020;40(2):251-263.
Li H, Wang D, Sun X, Hu L, Yu H, Wang J. Relationship between bacterial biofilm and clinical features of patients with chronic rhinosinusitis. Eur Arch Otorhinolaryngol. 2012;269(1):155-163.
Glowacki R, Tomaszewski KA, Strek P, et al. The influence of bacterial biofilm on the clinical outcome of chronic rhinosinusitis: a prospective, double-blind, scanning electron microscopy study. Eur Arch Otorhinolaryngol. 2014;271(5):1015-1021.
You H, Zhuge P, Li D, Shao L, Shi H, Du H. Factors affecting bacterial biofilm expression in chronic rhinosinusitis and the influences on prognosis. Am J Otolaryngol. 2011;32(6):583-590.
معلومات مُعتمدة: R01 DC003915 United States DC NIDCD NIH HHS; R01 DC011818 United States DC NIDCD NIH HHS
فهرسة مساهمة: Keywords: Biofilm; DNABII Proteins; FESS; PMNs
المشرفين على المادة: 0 (DNA, Z-Form)
0 (DNA, B-Form)
0 (Integration Host Factors)
تواريخ الأحداث: Date Created: 20230819 Date Completed: 20240318 Latest Revision: 20240416
رمز التحديث: 20240416
مُعرف محوري في PubMed: PMC10875147
DOI: 10.1002/lary.30986
PMID: 37597166
قاعدة البيانات: MEDLINE
الوصف
تدمد:1531-4995
DOI:10.1002/lary.30986