دورية أكاديمية
أعرض في EDS

Lack of local genetic representation in one of the regions with the highest bird species richness, the Peruvian Amazonia.

التفاصيل البيبلوغرافية
العنوان: Lack of local genetic representation in one of the regions with the highest bird species richness, the Peruvian Amazonia.
المؤلفون: Arana A; Museo de Historia Natural, Universidad Nacional Mayor de San Marcos, Lima, Peru.; Facultad de Ciencias Biológicas, Universidad Nacional Mayor de San Marcos, Lima, Peru., Arana C; Museo de Historia Natural, Universidad Nacional Mayor de San Marcos, Lima, Peru.; Facultad de Ciencias Biológicas, Universidad Nacional Mayor de San Marcos, Lima, Peru., Watsa M; San Diego Zoo Wildlife Alliance, Conservation Science and Wildlife Health, Escondido, California, United States of America., Tobler MW; San Diego Zoo Wildlife Alliance, Conservation Science and Wildlife Health, Escondido, California, United States of America., Pacheco V; Museo de Historia Natural, Universidad Nacional Mayor de San Marcos, Lima, Peru.; Facultad de Ciencias Biológicas, Universidad Nacional Mayor de San Marcos, Lima, Peru., Esteves J; Museo de Historia Natural, Universidad Nacional Mayor de San Marcos, Lima, Peru.; Facultad de Ciencias Biológicas, Universidad Nacional Mayor de San Marcos, Lima, Peru., Mena JL; San Diego Zoo Wildlife Alliance Peru, Cusco, Peru., Salinas L; Museo de Historia Natural, Universidad Nacional Mayor de San Marcos, Lima, Peru.; Facultad de Ciencias Biológicas, Universidad Nacional Mayor de San Marcos, Lima, Peru., Ramirez JL; Facultad de Ciencias Biológicas, Universidad Nacional Mayor de San Marcos, Lima, Peru.
المصدر: PloS one [PLoS One] 2024 Jan 02; Vol. 19 (1), pp. e0296305. Date of Electronic Publication: 2024 Jan 02 (Print Publication: 2024).
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE
أسماء مطبوعة: Original Publication: San Francisco, CA : Public Library of Science
مواضيع طبية MeSH: Biodiversity* , Birds*/genetics, Animals ; Peru ; Brazil
مستخلص: Peru ranks among the three countries with the highest bird species diversity globally and a majority of those species are found in the Peruvian Amazon. However, birds in this area are currently facing serious anthropogenic threats. Genetic and genomic methods are becoming important tools for avian biodiversity monitoring and conservation planning. Comprehensive molecular libraries that are publicly available are key to the effective deployment of these tools. We analyze the information gaps for four molecular markers in the most important genetic sequence databases, Barcode of Life Data Systems (BOLD) and NCBI GenBank, for bird species of the Peruvian Amazonia. We found that 64% of Peruvian Amazonian bird species have gene sequences for COI, 59.5% have CYTB sequences, 16.4% have 12S sequences, and only 0.6% have 18S sequences. However, these numbers decrease drastically to 4.3% for COI sequences when we only consider specimens sampled in Peru. Our data also showed that 43.8% of Peruvian Amazonian endemic species (n = 32) are missing sequences of any screened marker uploaded to GenBank or BOLD. Our results will encourage and guide efforts of the scientific community to complete reference libraries for Peruvian avian species that will be useful for future DNA-based monitoring projects that include birds.
Competing Interests: The authors have declared that no competing interests exist.
(Copyright: © 2024 Arana et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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تواريخ الأحداث: Date Created: 20240102 Date Completed: 20240104 Latest Revision: 20240105
رمز التحديث: 20240105
مُعرف محوري في PubMed: PMC10760656
DOI: 10.1371/journal.pone.0296305
PMID: 38165899
قاعدة البيانات: MEDLINE
الوصف
تدمد:1932-6203
DOI:10.1371/journal.pone.0296305