دورية أكاديمية
أعرض في EDS

Transcriptome Analysis of Compensatory Growth and Meat Quality Alteration after Varied Restricted Feeding Conditions in Beef Cattle.

التفاصيل البيبلوغرافية
العنوان: Transcriptome Analysis of Compensatory Growth and Meat Quality Alteration after Varied Restricted Feeding Conditions in Beef Cattle.
المؤلفون: Deng T; Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China.; Shaanxi Key Laboratory of Molecular Biology for Agriculture, College of Animal Science and Technology, Northwest A&F University, Yangling 712100, China., Liang M; Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China., Du L; Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China., Li K; Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China., Li J; Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China., Qian L; Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China., Xue Q; Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China., Qiu S; Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China., Xu L; Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China., Zhang L; Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China., Gao X; Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China., Li J; Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China., Lan X; Shaanxi Key Laboratory of Molecular Biology for Agriculture, College of Animal Science and Technology, Northwest A&F University, Yangling 712100, China., Gao H; Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China.
المصدر: International journal of molecular sciences [Int J Mol Sci] 2024 Feb 26; Vol. 25 (5). Date of Electronic Publication: 2024 Feb 26.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067 (Electronic) Linking ISSN: 14220067 NLM ISO Abbreviation: Int J Mol Sci Subsets: MEDLINE
أسماء مطبوعة: Original Publication: Basel, Switzerland : MDPI, [2000-
مواضيع طبية MeSH: Food Deprivation*/physiology , Gene Expression Profiling*, Cattle ; Animals ; Meat ; Cooking ; Body Composition/physiology ; Muscle, Skeletal/physiology ; Transcriptome
مستخلص: Compensatory growth (CG) is a physiological response that accelerates growth following a period of nutrient limitation, with the potential to improve growth efficiency and meat quality in cattle. However, the underlying molecular mechanisms remain poorly understood. In this study, 60 Huaxi cattle were divided into one ad libitum feeding (ALF) group and two restricted feeding groups (75% restricted, RF75; 50% restricted, RF50) undergoing a short-term restriction period followed by evaluation of CG. Detailed comparisons of growth performance during the experimental period, as well as carcass and meat quality traits, were conducted, complemented by a comprehensive transcriptome analysis of the longissimus dorsi muscle using differential expression analysis, gene set enrichment analysis (GSEA), gene set variation analysis (GSVA), and weighted correlation network analysis (WGCNA). The results showed that irrespective of the restriction degree, the restricted animals exhibited CG, achieving final body weights comparable to the ALF group. Compensating animals showed differences in meat quality traits, such as pH, cooking loss, and fat content, compared to the ALF group. Transcriptomic analysis revealed 57 genes and 31 pathways differentially regulated during CG, covering immune response, acid-lipid metabolism, and protein synthesis. Notably, complement-coagulation-fibrinolytic system synergy was identified as potentially responsible for meat quality optimization in RF75. This study provides novel and valuable genetic insights into the regulatory mechanisms of CG in beef cattle.
References: J Anim Sci. 1991 Aug;69(8):3251-64. (PMID: 1894561)
Nat Biotechnol. 2019 Aug;37(8):907-915. (PMID: 31375807)
Front Immunol. 2018 May 16;9:1055. (PMID: 29868016)
J Steroid Biochem Mol Biol. 2011 May;125(1-2):66-82. (PMID: 21193039)
Nutr Metab Cardiovasc Dis. 2012 Dec;22(12):1067-74. (PMID: 21704502)
PLoS One. 2016 Feb 12;11(2):e0149373. (PMID: 26871690)
J Anim Sci. 1990 Sep;68(9):2707-15. (PMID: 2211400)
Semin Thromb Hemost. 2017 Mar;43(2):135-142. (PMID: 28052305)
Domest Anim Endocrinol. 2000 Aug;19(2):121-32. (PMID: 11025191)
J Endocrinol. 2012 Jan;212(1):27-40. (PMID: 22045753)
Nature. 2011 Jul 20;475(7356):324-32. (PMID: 21776078)
Bioinformatics. 2014 Apr 1;30(7):923-30. (PMID: 24227677)
Meat Sci. 2022 Feb;184:108690. (PMID: 34656007)
Innovation (Camb). 2021 Jul 01;2(3):100141. (PMID: 34557778)
J Anim Sci. 1986 Dec;63(6):1968-82. (PMID: 3818470)
Brief Bioinform. 2016 May;17(3):393-407. (PMID: 26342128)
J Anim Sci. 2020 Jan 1;98(1):. (PMID: 31790553)
Meat Sci. 2017 Mar;125:128-136. (PMID: 27951464)
Meat Sci. 2009 Jan;81(1):163-70. (PMID: 22063977)
Nucleic Acids Res. 2015 Jan;43(Database issue):D447-52. (PMID: 25352553)
Pharmacol Ther. 2023 Jun;246:108428. (PMID: 37116587)
Meat Sci. 2005 Jul;70(3):543-54. (PMID: 22063752)
J Agric Food Chem. 2021 Oct 13;69(40):11867-11877. (PMID: 34586790)
Meat Sci. 2006 Dec;74(4):628-43. (PMID: 22063216)
Front Genet. 2016 Jul 25;7:127. (PMID: 27504120)
Adv Exp Med Biol. 2008;632:35-46. (PMID: 19025112)
BMC Genomics. 2016 Mar 17;17:244. (PMID: 26984536)
Bioinformatics. 2014 Aug 1;30(15):2114-20. (PMID: 24695404)
Genome Biol. 2014;15(12):550. (PMID: 25516281)
J Lipid Res. 2017 Aug;58(8):1493-1499. (PMID: 28258087)
J Anim Sci. 1991 Feb;69(2):811-8. (PMID: 2016207)
PLoS One. 2010 Nov 15;5(11):e13984. (PMID: 21085593)
Int J Biol Macromol. 2019 Sep 1;136:404-409. (PMID: 31202843)
Nucleic Acids Res. 2015 Apr 20;43(7):e47. (PMID: 25605792)
Am J Physiol Endocrinol Metab. 2008 Mar;294(3):E521-9. (PMID: 18160458)
Biomol Concepts. 2014 Mar;5(1):45-54. (PMID: 25372741)
Br J Haematol. 2018 Mar;180(6):782-798. (PMID: 29265338)
MedComm (2020). 2022 Aug 02;3(3):e161. (PMID: 35928554)
J Anim Sci. 1998 Jan;76(1):249-59. (PMID: 9464906)
Genome Res. 2003 Nov;13(11):2498-504. (PMID: 14597658)
Nat Genet. 2003 Jul;34(3):267-73. (PMID: 12808457)
Semin Cell Dev Biol. 2019 Jan;85:164-172. (PMID: 29107169)
Meat Sci. 2008 May;79(1):86-97. (PMID: 22062601)
Eur J Endocrinol. 2020 Apr;182(4):447-457. (PMID: 32069218)
Nucleic Acids Res. 2022 Jan 7;50(D1):D956-D961. (PMID: 34850103)
Meat Sci. 2015 Dec;110:109-17. (PMID: 26204231)
Proc Natl Acad Sci U S A. 2005 Oct 25;102(43):15545-50. (PMID: 16199517)
Nature. 2009 Nov 5;462(7269):108-12. (PMID: 19847166)
F1000Res. 2016 Jul 15;5:1717. (PMID: 27830058)
J Anim Sci. 2015 Jul;93(7):3578-89. (PMID: 26440026)
Bioinformatics. 2007 Apr 15;23(8):980-7. (PMID: 17303618)
Int J Mol Sci. 2021 Mar 26;22(7):. (PMID: 33810275)
Immunol Rev. 2023 Jan;313(1):15-24. (PMID: 36316810)
Nucleic Acids Res. 2009 Jan;37(1):1-13. (PMID: 19033363)
FASEB J. 2013 Feb;27(2):822-31. (PMID: 23118029)
Int J Mol Sci. 2022 Dec 14;23(24):. (PMID: 36555521)
J Thromb Haemost. 2023 Dec;21(12):3304-3316. (PMID: 38000850)
Arch Surg. 2001 Mar;136(3):297-304. (PMID: 11231849)
Funct Integr Genomics. 2010 Mar;10(1):39-51. (PMID: 19777276)
BMC Bioinformatics. 2008 Dec 29;9:559. (PMID: 19114008)
J Neurochem. 2007 Oct;103(2):831-9. (PMID: 17897357)
Domest Anim Endocrinol. 2021 Jan;74:106526. (PMID: 32810656)
J Biol Chem. 1998 Aug 14;273(33):20903-9. (PMID: 9694837)
Brief Bioinform. 2023 Jan 19;24(1):. (PMID: 36617463)
Annu Rev Food Sci Technol. 2014;5:133-53. (PMID: 24437687)
Sci Rep. 2019 Apr 15;9(1):6093. (PMID: 30988346)
BMC Evol Biol. 2019 Jan 17;19(1):27. (PMID: 30654737)
Semin Immunol. 2013 Feb;25(1):47-53. (PMID: 23684628)
J Biol Chem. 1969 Jun 25;244(12):3230-7. (PMID: 4978316)
J Allergy Clin Immunol. 2005 Jun;115(6):1119-28; quiz 1129. (PMID: 15940121)
Diabetes. 2008 Aug;57(8):2092-8. (PMID: 18559657)
J Autoimmun. 2023 May;137:102979. (PMID: 36535812)
Neurobiol Dis. 2014 Dec;72 Pt A:3-12. (PMID: 25173806)
Front Genet. 2018 Oct 18;9:463. (PMID: 30405687)
معلومات مُعتمدة: 32172693 National Natural Science Foundations of China; CARS-37 the Program of National Beef Cattle and Yak Industrial Technology System; 2020GG0210 the Science and Technology Project of Inner Mongolia Autonomous Region
فهرسة مساهمة: Keywords: cattle; compensatory growth; meat quality; transcriptome
تواريخ الأحداث: Date Created: 20240313 Date Completed: 20240314 Latest Revision: 20240315
رمز التحديث: 20240315
مُعرف محوري في PubMed: PMC10931649
DOI: 10.3390/ijms25052704
PMID: 38473950
قاعدة البيانات: MEDLINE
الوصف
تدمد:1422-0067
DOI:10.3390/ijms25052704