دورية أكاديمية

Assembly of the Tn7 targeting complex by a regulated stepwise process.

التفاصيل البيبلوغرافية
العنوان: Assembly of the Tn7 targeting complex by a regulated stepwise process.
المؤلفون: Shen Y; Department of Biochemistry, McGill University, Montreal, QC H3G 0B1, Canada; Centre de recherche en biologie structurale (CRBS), McGill University, Montreal, QC H3G 0B1, Canada., Krishnan SS; Department of Biochemistry, McGill University, Montreal, QC H3G 0B1, Canada; Centre de recherche en biologie structurale (CRBS), McGill University, Montreal, QC H3G 0B1, Canada., Petassi MT; Department of Microbiology, Cornell University, Ithaca, NY 14853, USA., Hancock MA; Centre de recherche en biologie structurale (CRBS), McGill University, Montreal, QC H3G 0B1, Canada; Department of Pharmacology and Therapeutics, McGill University, Montreal, QC H3G 1Y6, Canada., Peters JE; Department of Microbiology, Cornell University, Ithaca, NY 14853, USA., Guarné A; Department of Biochemistry, McGill University, Montreal, QC H3G 0B1, Canada; Centre de recherche en biologie structurale (CRBS), McGill University, Montreal, QC H3G 0B1, Canada. Electronic address: alba.guarne@mcgill.ca.
المصدر: Molecular cell [Mol Cell] 2024 Jun 20; Vol. 84 (12), pp. 2368-2381.e6. Date of Electronic Publication: 2024 Jun 03.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Cell Press Country of Publication: United States NLM ID: 9802571 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-4164 (Electronic) Linking ISSN: 10972765 NLM ISO Abbreviation: Mol Cell Subsets: MEDLINE
أسماء مطبوعة: Publication: Cambridge Ma : Cell Press
Original Publication: Cambridge, Mass. : Cell Press, c1997-
مواضيع طبية MeSH: Cryoelectron Microscopy* , DNA Transposable Elements*/genetics , Adenosine Triphosphate*/metabolism , Transposases*/metabolism , Transposases*/genetics , Transposases*/chemistry , Adenosine Diphosphate*/metabolism, Protein Binding ; Bacterial Proteins/metabolism ; Bacterial Proteins/genetics ; Bacterial Proteins/chemistry ; Models, Molecular ; Protein Multimerization ; Binding Sites
مستخلص: The Tn7 family of transposons is notable for its highly regulated integration mechanisms, including programmable RNA-guided transposition. The targeting pathways rely on dedicated target selection proteins from the TniQ family and the AAA+ adaptor TnsC to recruit and activate the transposase at specific target sites. Here, we report the cryoelectron microscopy (cryo-EM) structures of TnsC bound to the TniQ domain of TnsD from prototypical Tn7 and unveil key regulatory steps stemming from unique behaviors of ATP- versus ADP-bound TnsC. We show that TnsD recruits ADP-bound dimers of TnsC and acts as an exchange factor to release one protomer with exchange to ATP. This loading process explains how TnsC assembles a heptameric ring unidirectionally from the target site. This unique loading process results in functionally distinct TnsC protomers within the ring, providing a checkpoint for target immunity and explaining how insertions at programmed sites precisely occur in a specific orientation across Tn7 elements.
Competing Interests: Declaration of interests Cornell University has filed patent applications with J.E.P. and M.T.P. as inventors involving CRISPR-Cas systems associated with transposons that are not related to this work.
(Copyright © 2024 Elsevier Inc. All rights reserved.)
References: J Mol Biol. 2001 Apr 13;307(5):1161-70. (PMID: 11292332)
Nat Methods. 2019 Nov;16(11):1153-1160. (PMID: 31591578)
Cell. 2015 Aug 13;162(4):860-71. (PMID: 26276634)
Genome Biol. 2018 Nov 19;19(1):199. (PMID: 30454069)
EMBO J. 2003 Nov 3;22(21):5904-17. (PMID: 14592987)
Microbiology (Reading). 2001 Dec;147(Pt 12):3241-7. (PMID: 11739756)
Mol Microbiol. 2019 Dec;112(6):1635-1644. (PMID: 31502713)
Mol Cell. 2023 Jun 15;83(12):2122-2136.e10. (PMID: 37267947)
Protein Sci. 2018 Jan;27(1):14-25. (PMID: 28710774)
Genes Dev. 2001 Mar 15;15(6):737-47. (PMID: 11274058)
Science. 2021 Aug 13;373(6556):768-774. (PMID: 34385391)
J Comput Chem. 2004 Oct;25(13):1605-12. (PMID: 15264254)
Microbiol Spectr. 2014 Oct;2(5):. (PMID: 26104363)
Nat Methods. 2017 Mar;14(3):290-296. (PMID: 28165473)
Science. 2019 Jul 05;365(6448):48-53. (PMID: 31171706)
Methods Mol Biol. 2014;1137:17-27. (PMID: 24573471)
IUCrJ. 2020 Feb 11;7(Pt 2):253-267. (PMID: 32148853)
Proc Natl Acad Sci U S A. 2017 Aug 29;114(35):E7358-E7366. (PMID: 28811374)
Nucleic Acids Res. 2007 Jul;35(Web Server issue):W375-83. (PMID: 17452350)
Cell. 2020 Dec 23;183(7):1757-1771.e18. (PMID: 33271061)
Nat Rev Mol Cell Biol. 2001 Nov;2(11):806-14. (PMID: 11715047)
Nature. 2022 Sep;609(7926):384-393. (PMID: 36002573)
Nature. 2023 Jan;613(7945):775-782. (PMID: 36442503)
Mob DNA. 2010 Jul 23;1(1):18. (PMID: 20653944)
J Mol Biol. 1989 May 5;207(1):35-52. (PMID: 2544738)
Genetics. 1997 Mar;145(3):573-85. (PMID: 9055068)
Nat Struct Mol Biol. 2022 Feb;29(2):143-151. (PMID: 35173349)
Trends Biochem Sci. 1998 Dec;23(12):486-90. (PMID: 9868372)
Cell. 2021 Apr 29;184(9):2441-2453.e18. (PMID: 33770501)
Nature. 2020 Jan;577(7789):271-274. (PMID: 31853065)
J Bacteriol. 1988 Jan;170(1):352-8. (PMID: 2826397)
EMBO J. 1997 Nov 17;16(22):6823-34. (PMID: 9362496)
Nat Commun. 2020 Oct 15;11(1):5208. (PMID: 33060581)
Mob DNA. 2021 Jun 8;12(1):13. (PMID: 34103093)
Acta Crystallogr D Struct Biol. 2018 Jun 1;74(Pt 6):545-559. (PMID: 29872005)
Cell. 2023 Sep 14;186(19):4204-4215.e19. (PMID: 37557170)
J Biol Chem. 2013 Aug 16;288(33):23687-95. (PMID: 23803605)
Proc Natl Acad Sci U S A. 1989 Jun;86(11):3958-62. (PMID: 2542960)
J Bacteriol. 2007 Mar;189(5):2170-3. (PMID: 17194796)
Antioxid Redox Signal. 2010 Oct;13(8):1157-67. (PMID: 20486758)
Acta Crystallogr D Biol Crystallogr. 2010 Apr;66(Pt 4):486-501. (PMID: 20383002)
Cell. 1993 Mar 26;72(6):931-43. (PMID: 8384534)
Mol Cell. 2022 Feb 03;82(3):616-628.e5. (PMID: 35051352)
Cell. 2022 Dec 22;185(26):4999-5010.e17. (PMID: 36435179)
J Struct Biol. 2005 Oct;152(1):36-51. (PMID: 16182563)
Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 1):2126-32. (PMID: 15572765)
J Mol Biol. 2001 Jan 19;305(3):633-42. (PMID: 11152618)
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):213-21. (PMID: 20124702)
Nucleic Acids Res. 2023 Jan 25;51(2):765-782. (PMID: 36537206)
Elife. 2018 Nov 09;7:. (PMID: 30412051)
EMBO J. 2001 Feb 15;20(4):924-32. (PMID: 11179236)
Res Microbiol. 2004 Jun;155(5):387-98. (PMID: 15207871)
Proc Natl Acad Sci U S A. 2014 Jul 15;111(28):E2858-65. (PMID: 24982178)
Plasmid. 2006 Mar;55(2):152-7. (PMID: 16139359)
Mol Microbiol. 2014 Sep;93(6):1084-92. (PMID: 25091064)
Proc Natl Acad Sci U S A. 2000 Apr 11;97(8):3936-41. (PMID: 10737770)
Nature. 2021 Nov;599(7885):497-502. (PMID: 34759315)
Proc Natl Acad Sci U S A. 2021 Dec 07;118(49):. (PMID: 34845024)
Nature. 2019 Jul;571(7764):219-225. (PMID: 31189177)
Nat Protoc. 2012 Jul 19;7(8):1511-22. (PMID: 22814390)
Mol Cell. 2022 Jul 21;82(14):2618-2632.e7. (PMID: 35654042)
معلومات مُعتمدة: R01 GM129118 United States GM NIGMS NIH HHS
فهرسة مساهمة: Keywords: AAA+ ATPase; DNA transposition; Tn7 transposon; TnsD/TniQ proteins; cryo-EM; nucleotide-exchange factor; protein-DNA interactions; target-site selection; transposition immunity
المشرفين على المادة: 0 (DNA Transposable Elements)
8L70Q75FXE (Adenosine Triphosphate)
EC 2.7.7.- (Transposases)
61D2G4IYVH (Adenosine Diphosphate)
0 (Bacterial Proteins)
تواريخ الأحداث: Date Created: 20240604 Date Completed: 20240621 Latest Revision: 20240831
رمز التحديث: 20240831
مُعرف محوري في PubMed: PMC11364213
DOI: 10.1016/j.molcel.2024.05.012
PMID: 38834067
قاعدة البيانات: MEDLINE
الوصف
تدمد:1097-4164
DOI:10.1016/j.molcel.2024.05.012