دورية أكاديمية

Proofreading mechanisms of the innate immune receptor RIG-I: distinguishing self and viral RNA.

التفاصيل البيبلوغرافية
العنوان: Proofreading mechanisms of the innate immune receptor RIG-I: distinguishing self and viral RNA.
المؤلفون: Solotchi M; Department of Biochemistry and Molecular Biology, Robert Wood Johnson Medical School, Rutgers University, Piscataway, NJ 08854, U.S.A.; Graduate School of Biomedical Sciences, Robert Wood Johnson Medical School, Rutgers University, Piscataway, NJ, U.S.A., Patel SS; Department of Biochemistry and Molecular Biology, Robert Wood Johnson Medical School, Rutgers University, Piscataway, NJ 08854, U.S.A.
المصدر: Biochemical Society transactions [Biochem Soc Trans] 2024 Jun 26; Vol. 52 (3), pp. 1131-1148.
نوع المنشور: Journal Article; Review
اللغة: English
بيانات الدورية: Publisher: Portland Press On The Behalf Of The Biochemical Society Country of Publication: England NLM ID: 7506897 Publication Model: Print Cited Medium: Internet ISSN: 1470-8752 (Electronic) Linking ISSN: 03005127 NLM ISO Abbreviation: Biochem Soc Trans Subsets: MEDLINE
أسماء مطبوعة: Original Publication: London : Portland Press On The Behalf Of The Biochemical Society
مواضيع طبية MeSH: RNA, Viral*/metabolism , DEAD Box Protein 58*/metabolism , Immunity, Innate* , Receptors, Immunologic*/metabolism, Humans ; Animals ; RNA, Double-Stranded/metabolism ; Interferon-Induced Helicase, IFIH1/metabolism ; DEAD-box RNA Helicases/metabolism ; RNA Helicases/metabolism
مستخلص: The RIG-I-like receptors (RLRs), comprising retinoic acid-inducible gene I (RIG-I), melanoma differentiation-associated gene 5 (MDA5), and laboratory of genetics and physiology 2 (LGP2), are pattern recognition receptors belonging to the DExD/H-box RNA helicase family of proteins. RLRs detect viral RNAs in the cytoplasm and respond by initiating a robust antiviral response that up-regulates interferon and cytokine production. RIG-I and MDA5 complement each other by recognizing different RNA features, and LGP2 regulates their activation. RIG-I's multilayered RNA recognition and proofreading mechanisms ensure accurate viral RNA detection while averting harmful responses to host RNAs. RIG-I's C-terminal domain targets 5'-triphosphate double-stranded RNA (dsRNA) blunt ends, while an intrinsic gating mechanism prevents the helicase domains from non-specifically engaging with host RNAs. The ATPase and RNA translocation activity of RIG-I adds another layer of selectivity by minimizing the lifetime of RIG-I on non-specific RNAs, preventing off-target activation. The versatility of RIG-I's ATPase function also amplifies downstream signaling by enhancing the signaling domain (CARDs) exposure on 5'-triphosphate dsRNA and promoting oligomerization. In this review, we offer an in-depth understanding of the mechanisms RIG-I uses to facilitate viral RNA sensing and regulate downstream activation of the immune system.
(© 2024 The Author(s).)
References: J Virol. 1990 Dec;64(12):6196-203. (PMID: 2243392)
Curr Opin Virol. 2011 Dec;1(6):519-25. (PMID: 22328912)
Curr Opin Struct Biol. 2010 Jun;20(3):313-24. (PMID: 20456941)
EMBO Rep. 2013 Sep;14(9):780-7. (PMID: 23846310)
J Mol Biol. 2014 Mar 20;426(6):1161-77. (PMID: 24326250)
Sci Adv. 2019 Oct 02;5(10):eaax3641. (PMID: 31616790)
Mol Cell. 2021 Feb 4;81(3):599-613.e8. (PMID: 33373584)
Nature. 2007 Apr 19;446(7138):916-920. (PMID: 17392790)
Cell. 2011 Oct 14;147(2):409-22. (PMID: 22000018)
J Interferon Cytokine Res. 2019 Aug;39(8):450-458. (PMID: 31066607)
Elife. 2018 Jul 26;7:. (PMID: 30047865)
Front Immunol. 2020 May 27;11:1030. (PMID: 32536927)
Antiviral Res. 2008 Oct;80(1):1-10. (PMID: 18571739)
J Virol. 2006 Jun;80(11):5168-78. (PMID: 16698997)
J Biol Chem. 2012 Dec 14;287(51):42564-73. (PMID: 23055530)
ACS Chem Biol. 2020 Feb 21;15(2):311-317. (PMID: 31944652)
FEBS J. 2019 Apr;286(8):1543-1560. (PMID: 30715798)
Mol Cell. 2023 Jan 5;83(1):90-104.e4. (PMID: 36521492)
Mol Cell. 2022 Nov 3;82(21):4131-4144.e6. (PMID: 36272408)
Cell Rep. 2021 Dec 28;37(13):110175. (PMID: 34965427)
Ann N Y Acad Sci. 2008 Nov;1143:1-20. (PMID: 19076341)
Elife. 2018 Dec 12;7:. (PMID: 30526856)
Mol Cell. 2018 Oct 18;72(2):355-368.e4. (PMID: 30270105)
Elife. 2015 Nov 26;4:. (PMID: 26609812)
J Virol. 1995 Sep;69(9):5754-62. (PMID: 7637020)
Science. 2010 Jan 15;327(5963):291-5. (PMID: 20075244)
J Exp Med. 2008 Jul 7;205(7):1601-10. (PMID: 18591409)
Nat Rev Immunol. 2024 Apr;24(4):235-249. (PMID: 37752355)
mBio. 2021 Oct 26;12(5):e0233521. (PMID: 34544279)
Nat Methods. 2022 Jun;19(6):679-682. (PMID: 35637307)
Nucleic Acids Res. 2023 Sep 22;51(17):9356-9368. (PMID: 37486777)
Proc Natl Acad Sci U S A. 2016 Jan 19;113(3):596-601. (PMID: 26733676)
J Biol Chem. 2009 May 15;284(20):13881-13891. (PMID: 19278996)
Proc Natl Acad Sci U S A. 2007 Jan 9;104(2):582-7. (PMID: 17190814)
Elife. 2014 Jan 01;3:e01489. (PMID: 24569476)
Proc Natl Acad Sci U S A. 2010 Jan 5;107(1):314-9. (PMID: 20018665)
EMBO Rep. 2011 Oct 28;12(11):1127-34. (PMID: 21979817)
Virus Res. 2023 Oct 15;336:199211. (PMID: 37634741)
Annu Rev Immunol. 2018 Apr 26;36:667-694. (PMID: 29677479)
Cell Rep. 2019 Feb 19;26(8):2019-2027.e4. (PMID: 30784585)
Br J Cancer. 2018 Jul;119(1):4-11. (PMID: 29808015)
PLoS Pathog. 2013;9(8):e1003533. (PMID: 23950712)
Cell. 2019 May 16;177(5):1187-1200.e16. (PMID: 31006531)
J Immunol. 2020 Aug 15;205(4):883-891. (PMID: 32769143)
Curr Opin Virol. 2015 Jun;12:91-8. (PMID: 25942693)
Antiviral Res. 2013 Dec;100(3):615-35. (PMID: 24129118)
Nature. 2014 May 1;509(7498):110-4. (PMID: 24590070)
J Immunol. 2005 Sep 1;175(5):2851-8. (PMID: 16116171)
Structure. 2010 Aug 11;18(8):1032-43. (PMID: 20637642)
EBioMedicine. 2019 Mar;41:146-155. (PMID: 30852164)
Nucleic Acids Res. 2015 Jan;43(2):1216-30. (PMID: 25539915)
Front Immunol. 2020 Dec 07;11:592333. (PMID: 33365029)
Cell Rep. 2019 Dec 17;29(12):3807-3815.e3. (PMID: 31851914)
Cell. 2010 Apr 16;141(2):315-30. (PMID: 20403326)
Nucleic Acids Res. 2023 Nov 27;51(21):11893-11910. (PMID: 37831086)
Nature. 2021 Aug;596(7873):583-589. (PMID: 34265844)
Immunity. 2015 Jul 21;43(1):41-51. (PMID: 26187414)
Nucleic Acids Res. 2023 Aug 25;51(15):8102-8114. (PMID: 37326006)
J Biol Chem. 2009 Jan 9;284(2):807-17. (PMID: 19017631)
J Immunol. 2023 May 1;210(9):1247-1256. (PMID: 36939421)
EMBO J. 2022 May 16;41(10):e109782. (PMID: 35437807)
Mol Cell. 2024 Jan 4;84(1):107-119. (PMID: 38118451)
Cancers (Basel). 2020 Oct 27;12(11):. (PMID: 33121210)
Immunol Rev. 2021 Nov;304(1):154-168. (PMID: 34514601)
Cell. 2013 Jan 17;152(1-2):276-89. (PMID: 23273991)
Cytokine. 2017 Oct;98:4-14. (PMID: 27751656)
Nucleic Acids Res. 2016 Sep 19;44(16):7511-26. (PMID: 27317694)
Nature. 2014 Oct 16;514(7522):372-375. (PMID: 25119032)
Elife. 2015 Sep 15;4:. (PMID: 26371557)
Cardiovasc Res. 2012 Jan 1;93(1):190-9. (PMID: 21979142)
Nature. 2011 Sep 25;479(7373):423-7. (PMID: 21947008)
RNA. 2012 Dec;18(12):2118-27. (PMID: 23118418)
Front Immunol. 2022 May 26;13:893204. (PMID: 35693778)
J Virol. 2006 Jun;80(12):6072-83. (PMID: 16731946)
J Virol. 2014 Aug;88(15):8194-200. (PMID: 24850739)
EMBO Rep. 2018 Jun;19(6):. (PMID: 29661858)
Nucleic Acids Res. 2016 Jan 29;44(2):896-909. (PMID: 26612866)
EMBO J. 2022 Sep 1;41(17):e111608. (PMID: 35833542)
Nat Immunol. 2004 Jul;5(7):730-7. (PMID: 15208624)
Proc Natl Acad Sci U S A. 2011 Dec 27;108(52):21010-5. (PMID: 22160685)
Nat Rev Immunol. 2015 Feb;15(2):87-103. (PMID: 25614319)
Front Immunol. 2018 Jun 20;9:1379. (PMID: 29973930)
J Biol Chem. 2022 Aug;298(8):102171. (PMID: 35750211)
Nucleic Acids Res. 2024 Jan 11;52(1):355-369. (PMID: 38015453)
Science. 2009 Feb 20;323(5917):1070-4. (PMID: 19119185)
Proc Natl Acad Sci U S A. 2005 Dec 6;102(49):17717-22. (PMID: 16301520)
Nat Rev Immunol. 2014 Jan;14(1):36-49. (PMID: 24362405)
Nat Commun. 2023 Nov 11;14(1):7308. (PMID: 37951994)
Nucleic Acids Res. 2022 Jun 10;50(10):5850-5863. (PMID: 35580046)
Mol Cell. 2016 May 19;62(4):586-602. (PMID: 27203181)
Cell Mol Immunol. 2021 Mar;18(3):539-555. (PMID: 33462384)
Nature. 2018 Aug;560(7717):238-242. (PMID: 30046113)
J Interferon Cytokine Res. 2019 Nov;39(11):669-683. (PMID: 31237466)
Nucleic Acids Res. 2019 Nov 18;47(20):e130. (PMID: 31504804)
J Virol. 2006 Dec;80(24):12332-42. (PMID: 17020950)
Mol Cell. 2014 Sep 4;55(5):771-81. (PMID: 25127512)
Immunity. 2021 Oct 12;54(10):2218-2230.e5. (PMID: 34644557)
Mol Cell. 2018 Dec 20;72(6):999-1012.e6. (PMID: 30449722)
Cold Spring Harb Perspect Biol. 2009 Dec;1(6):a001651. (PMID: 20457564)
J Virol. 2011 Feb;85(3):1224-36. (PMID: 21084468)
Mol Cell. 2013 Sep 12;51(5):573-83. (PMID: 23993742)
Nature. 2006 May 4;441(7089):101-5. (PMID: 16625202)
BMC Biol. 2015 Jul 28;13:54. (PMID: 26215161)
Leukemia. 2020 Apr;34(4):1017-1026. (PMID: 31740809)
J Virol. 2005 Mar;79(5):2689-99. (PMID: 15708988)
PLoS One. 2009 Jun 01;4(6):e5760. (PMID: 19484123)
Mol Cell. 2014 Aug 21;55(4):511-23. (PMID: 25018021)
Science. 2006 Nov 10;314(5801):994-7. (PMID: 17038590)
Am J Hum Genet. 2015 Feb 5;96(2):266-74. (PMID: 25620203)
Nat Struct Mol Biol. 2010 Jul;17(7):781-7. (PMID: 20581823)
Cell. 2011 Oct 14;147(2):423-35. (PMID: 22000019)
Nat Commun. 2018 Dec 18;9(1):5366. (PMID: 30560918)
J Virol. 2015 Dec 16;90(5):2372-87. (PMID: 26676770)
J Clin Invest. 2001 Jan;107(1):7-11. (PMID: 11134171)
mBio. 2015 Mar 03;6(2):e02349. (PMID: 25736886)
Sci Adv. 2018 Feb 21;4(2):e1701854. (PMID: 29492454)
Cell. 2011 Aug 5;146(3):448-61. (PMID: 21782231)
Nat Rev Immunol. 2020 Sep;20(9):537-551. (PMID: 32203325)
فهرسة مساهمة: Keywords: RIG-I like receptors; helicase; nucleic acid receptors
المشرفين على المادة: 0 (RNA, Viral)
EC 3.6.4.13 (DEAD Box Protein 58)
0 (Receptors, Immunologic)
EC 3.6.1.- (RIGI protein, human)
0 (RNA, Double-Stranded)
EC 3.6.4.13 (Interferon-Induced Helicase, IFIH1)
EC 3.6.4.13 (DEAD-box RNA Helicases)
EC 3.6.1.- (IFIH1 protein, human)
EC 3.6.4.13 (RNA Helicases)
تواريخ الأحداث: Date Created: 20240617 Date Completed: 20240626 Latest Revision: 20240828
رمز التحديث: 20240828
مُعرف محوري في PubMed: PMC11346460
DOI: 10.1042/BST20230724
PMID: 38884803
قاعدة البيانات: MEDLINE
الوصف
تدمد:1470-8752
DOI:10.1042/BST20230724