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Deciphering Pteronia's evolution in the Cape Floristic Region: A comprehensive study disputes polyploid deficiency and affirms diploid radiation.

التفاصيل البيبلوغرافية
العنوان: Deciphering Pteronia's evolution in the Cape Floristic Region: A comprehensive study disputes polyploid deficiency and affirms diploid radiation.
المؤلفون: Chumová Z; Institute of Botany of the Czech Academy of Sciences, Zámek 1, Průhonice, CZ-25243, Czech Republic., Havlíčková E; Institute of Botany of the Czech Academy of Sciences, Zámek 1, Průhonice, CZ-25243, Czech Republic.; Department of Botany, Faculty of Science, Charles University, Benátská 2, Prague, CZ-12800, Czech Republic., Zeisek V; Institute of Botany of the Czech Academy of Sciences, Zámek 1, Průhonice, CZ-25243, Czech Republic.; Department of Botany, Faculty of Science, Charles University, Benátská 2, Prague, CZ-12800, Czech Republic., Šemberová K; Institute of Botany of the Czech Academy of Sciences, Zámek 1, Průhonice, CZ-25243, Czech Republic., Mandáková T; Central European Institute of Technology, Masaryk University, Brno, CZ-625 00, Czech Republic.; Department of Experimental Biology, Faculty of Science, Masaryk University, Brno, CZ-625 00, Czech Republic., Euston-Brown D; Independent Botanist, Scarborough, 7975, Cape Town, South Africa., Trávníček P; Institute of Botany of the Czech Academy of Sciences, Zámek 1, Průhonice, CZ-25243, Czech Republic.
المصدر: The Plant journal : for cell and molecular biology [Plant J] 2024 Sep; Vol. 119 (5), pp. 2236-2254. Date of Electronic Publication: 2024 Jul 09.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Blackwell Scientific Publishers and BIOS Scientific Publishers in association with the Society for Experimental Biology Country of Publication: England NLM ID: 9207397 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1365-313X (Electronic) Linking ISSN: 09607412 NLM ISO Abbreviation: Plant J Subsets: MEDLINE
أسماء مطبوعة: Original Publication: Oxford : Blackwell Scientific Publishers and BIOS Scientific Publishers in association with the Society for Experimental Biology, c1991-
مواضيع طبية MeSH: Polyploidy* , Genome, Plant*/genetics , Phylogeny* , Diploidy* , Asteraceae*/genetics, Genome Size ; Biological Evolution ; Biodiversity ; Evolution, Molecular
مستخلص: The Greater Cape Floristic Region (GCFR) is renowned for its exceptional biodiversity, accommodating over 11 000 plant species, notable degree of endemism, and substantial diversification within limited plant lineages, a phenomenon ascribed to historical radiation events. While both abiotic and biotic factors contribute to this diversification, comprehensive genomic alterations, recognized as pivotal in the diversification of angiosperms, are perceived as uncommon. This investigation focuses on the genus Pteronia, a prominent representative of the Asteraceae family in the GCFR. Employing NGS-based HybSeq and RADSeq methodologies, flow cytometry, karyology, and ecological modeling, we scrutinize the intricacies of its polyploid evolution. Phylogenetic reconstructions using 951 low-copy nuclear genes confirm Pteronia as a well-supported, distinct clade within the tribe Astereae. The ingroup displays a structure indicative of rapid radiation likely antedating polyploid establishment, with the two main groups demarcated by their presence or absence in the fynbos biome. Genome size analysis encompasses 1293 individuals across 347 populations, elucidating significant variation ranging from 6.1 to 34.2 pg (2C-value). Pteronia demonstrates substantially large genome sizes within Astereae and phanerophytes. Polyploidy is identified in 31% of the studied species, with four discerned ploidy levels (2x, 4x, 6x, 8x). Cytotypes exhibit marked distinctions in environmental traits, influencing their distribution across biomes and augmenting their niche differentiation. These revelations challenge the presumed scarcity of polyploidy in the Cape flora, underscoring the imperative need for detailed population studies. The intricate evolutionary history of Pteronia, characterized by recent polyploidy and genome size variation, contributes substantially to the comprehension of diversification patterns within the GCFR biodiversity hotspot.
(© 2024 The Author(s). The Plant Journal published by Society for Experimental Biology and John Wiley & Sons Ltd.)
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معلومات مُعتمدة: 202123 Grantová agentura, Univerzita Karlova; ID90254 Ministerstvo školství, mládeže a tělovýchovy, e-INFRA CZ project; 19-20049S Grantová agentura České republiky; RVO 67985939 Institute of Botany of the Czech Academy of Sciences
فهرسة مساهمة: Keywords: Pteronia; Asteraceae; Greater Cape Floristic Region (GCFR); HybSeq; RADSeq; genome size; niche modeling; polyploidy
تواريخ الأحداث: Date Created: 20240709 Date Completed: 20240827 Latest Revision: 20240827
رمز التحديث: 20240828
DOI: 10.1111/tpj.16914
PMID: 38981008
قاعدة البيانات: MEDLINE
الوصف
تدمد:1365-313X
DOI:10.1111/tpj.16914