دورية أكاديمية

Geographical distribution of enteric pathogenic viruses in Burkina Faso: a systematic review and meta-analysis.

التفاصيل البيبلوغرافية
العنوان: Geographical distribution of enteric pathogenic viruses in Burkina Faso: a systematic review and meta-analysis.
المؤلفون: Traore KA; Laboratoire Sciences de la Vie et de la Terre (LaSVT), Université Norbert ZONGO (UNZ), Koudougou, Burkina Faso. kuabtraore@live.fr.; Laboratoire de Biologie Moléculaire, d'Epidémiologie et de Surveillance des Bactéries et Virus Transmissibles par les Aliments (LaBESTA), Université Joseph KI-ZERBO, Ouagadougou, Burkina Faso. kuabtraore@live.fr., Akapovi MM; Laboratoire de Biologie Moléculaire, d'Epidémiologie et de Surveillance des Bactéries et Virus Transmissibles par les Aliments (LaBESTA), Université Joseph KI-ZERBO, Ouagadougou, Burkina Faso., Ouedraogo N; Laboratoire de Biologie Moléculaire, d'Epidémiologie et de Surveillance des Bactéries et Virus Transmissibles par les Aliments (LaBESTA), Université Joseph KI-ZERBO, Ouagadougou, Burkina Faso.; Université de Dédougou (UDD), Dédougou, Burkina Faso., Ouoba JB; Laboratoire de Biologie Moléculaire, d'Epidémiologie et de Surveillance des Bactéries et Virus Transmissibles par les Aliments (LaBESTA), Université Joseph KI-ZERBO, Ouagadougou, Burkina Faso.; Centre universitaire de Manga (CUM), Manga, Burkina Faso., Roques P; Virology Unit, Institut Pasteur de Guinée (IPGui), Conakry, Guinea., Barro N; Laboratoire de Biologie Moléculaire, d'Epidémiologie et de Surveillance des Bactéries et Virus Transmissibles par les Aliments (LaBESTA), Université Joseph KI-ZERBO, Ouagadougou, Burkina Faso.
المصدر: BMC infectious diseases [BMC Infect Dis] 2024 Jul 31; Vol. 24 (1), pp. 756. Date of Electronic Publication: 2024 Jul 31.
نوع المنشور: Systematic Review; Journal Article; Meta-Analysis
اللغة: English
بيانات الدورية: Publisher: BioMed Central Country of Publication: England NLM ID: 100968551 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2334 (Electronic) Linking ISSN: 14712334 NLM ISO Abbreviation: BMC Infect Dis Subsets: MEDLINE
أسماء مطبوعة: Original Publication: London : BioMed Central, [2001-
مواضيع طبية MeSH: Gastroenteritis*/epidemiology , Gastroenteritis*/virology, Burkina Faso/epidemiology ; Humans ; Prevalence ; Genotype ; Viruses/classification ; Viruses/isolation & purification ; Viruses/genetics ; Rotavirus/genetics ; Rotavirus/isolation & purification
مستخلص: Background: Viruses, which are transmitted mainly via the digestive tract, are responsible for the high morbidity and mortality of diseases, particularly in low-income countries. Although several studies have established the prevalence and characterization of various enteric viruses in Burkina Faso, to date, no aggregate data have been released.
Objective: Our objective was to describe the available data on the prevalence and circulating genotypes of enteric pathogen viruses responsible for human infections in Burkina Faso by carrying out a systematic review and meta-analysis.
Methods: Potentially relevant studies were identified by a search of PubMed, ScienceDirect, Google Scholar, university libraries and by a manual search of the reference lists of identified studies. The search with no restrictions on language or age was limited to studies conducted only in Burkina. Study selection, data extraction, and methodological quality of the included studies were performed independently by two investigators. Heterogeneity between studies was assessed using the Cochrane Q test and I2 test statistics based on the random effects model. Comprehensive meta-analysis (CMA 3.7) was employed to compute the pooled prevalence of pathogens identified in the studies.
Results: Forty-three (43) studies reporting 4,214 diagnosed cases in all aged human populations were selected. Overall, 72.6% of the pathogens diagnosed were gastroenteritis, and 27.2% were entero-transmissible hepatitis viruses. Rotavirus was the most common cause of human viral gastroenteritis, accounting for 27.7% (95% CI: 20.9 - 35.8) of the cases, followed by norovirus (16% (95% CI: 12.25 - 20.6)) and sapovirus (11.2% (95% CI: 6.2 - 19.4)). In terms of human entero-transmissible infections, hepatitis A virus (HAV) was the most prevalent (52% [95% CI: 14.2-87.7] of total antibodies), followed by hepatitis E virus (HEV) (28.3% [95% CI: 17.7-42]).
Conclusions: This study highlights the substantial burden of viral enteric infections and highlights the need for more molecular epidemiological studies to improve preventive measures against these viruses.
(© 2024. The Author(s).)
References: PLoS Med. 2009 Jul 21;6(7):e1000097. (PMID: 19621072)
Infect Dis Poverty. 2016 Aug 12;5(1):83. (PMID: 27514855)
Med Trop (Mars). 2007 Jun;67(3):249-55. (PMID: 17784676)
Vet Anim Sci. 2019 May 30;7:100059. (PMID: 32734080)
Viruses. 2020 Apr 27;12(5):. (PMID: 32349380)
Pediatr Int. 2004 Apr;46(2):245-52. (PMID: 15056259)
Pan Afr Med J. 2021 Mar 12;38:259. (PMID: 34104307)
J Med Virol. 2005 Dec;77(4):522-7. (PMID: 16254959)
Virol J. 2022 Jun 28;19(1):115. (PMID: 35765033)
PLoS One. 2013 Sep 04;8(9):e72788. (PMID: 24023773)
J Virol. 2012 Oct;86(20):11024-30. (PMID: 22855485)
Lancet Infect Dis. 2018 Nov;18(11):1211-1228. (PMID: 30243583)
Stat Med. 2002 Jun 15;21(11):1539-58. (PMID: 12111919)
J Clin Virol. 2009 Jan;44(1):1-8. (PMID: 19084472)
J Clin Microbiol. 2012 May;50(5):1650-8. (PMID: 22337981)
N Engl J Med. 2010 Jan 28;362(4):289-98. (PMID: 20107214)
Epidemiol Infect. 2019 Jan;147:e218. (PMID: 31364546)
PLoS One. 2012;7(10):e48125. (PMID: 23110187)
J Med Virol. 2018 Sep;90(9):1453-1460. (PMID: 29718582)
Pak J Biol Sci. 2009 Feb 1;12(3):258-63. (PMID: 19579955)
J Clin Virol. 2016 Mar;76:24-9. (PMID: 26803285)
J Trop Med. 2015;2015:309648. (PMID: 26649055)
Viruses. 2021 Sep 23;13(10):. (PMID: 34696335)
Epidemiol Infect. 2020 Mar 02;148:e64. (PMID: 32115003)
Emerg Infect Dis. 2021 May;27(5):1438-1445. (PMID: 33900173)
Infect Genet Evol. 2015 Jun;32:396-400. (PMID: 25847694)
Int J Infect Dis. 2011 Sep;15(9):e646-52. (PMID: 21763172)
Viruses. 2019 Jun 14;11(6):. (PMID: 31207982)
J Clin Virol. 2013 Nov;58(3):515-21. (PMID: 24029685)
J Infect Dis. 2010 Sep 1;202 Suppl:S5-S11. (PMID: 20684718)
Pediatr Infect Dis J. 2014 Apr;33(4):355-9. (PMID: 24637513)
Appl Environ Microbiol. 2018 Mar 1;84(6):. (PMID: 29305515)
Rev Med Virol. 2022 Jan;32(1):e2237. (PMID: 33793023)
Int J Infect Dis. 2008 Nov;12(6):e11-7. (PMID: 18565780)
Wkly Epidemiol Rec. 2012 Jul 13;87(28/29):261–76. (PMID: 22905367)
Virol J. 2018 Oct 23;15(1):163. (PMID: 30352598)
PLoS One. 2013 Jul 19;8(7):e69557. (PMID: 23894502)
Infect Drug Resist. 2020 Feb 07;13:363-372. (PMID: 32104008)
BMC Med Res Methodol. 2008 Nov 27;8:79. (PMID: 19036172)
J Eval Clin Pract. 2008 Oct;14(5):951-7. (PMID: 19018930)
Emerg Infect Dis. 2016 Apr;22(4):755-7. (PMID: 26982195)
Viruses. 2020 Jan 03;12(1):. (PMID: 31947826)
BMC Pediatr. 2010 Dec 20;10:94. (PMID: 21171984)
BMC Public Health. 2017 Mar 21;17(1):274. (PMID: 28327111)
J Med Virol. 2005 Dec;77(4):519-21. (PMID: 16254969)
PLoS One. 2016 Apr 26;11(4):e0146280. (PMID: 27116615)
J Clin Microbiol. 2009 Apr;47(4):1037-45. (PMID: 19193841)
PLoS One. 2016 Apr 19;11(4):e0153652. (PMID: 27092779)
Int J Evid Based Healthc. 2015 Sep;13(3):147-53. (PMID: 26317388)
Mali Med. 2014;29(2):66-71. (PMID: 30049130)
Lancet. 2010 Aug 21;376(9741):606-14. (PMID: 20692030)
Am J Trop Med Hyg. 2015 Dec;93(6):1356-9. (PMID: 26438027)
Ann Soc Belg Med Trop (1920). 1960 Dec 31;40:879-92. (PMID: 13721711)
PLoS One. 2020 Apr 27;15(4):e0232113. (PMID: 32339187)
Biometrics. 2018 Sep;74(3):785-794. (PMID: 29141096)
J Med Virol. 2011 Aug;83(8):1485-90. (PMID: 21678452)
Pak J Biol Sci. 2007 Dec 1;10(23):4266-70. (PMID: 19086583)
Emerg Infect Dis. 2008 Apr;14(4):681-3. (PMID: 18394300)
BMC Pediatr. 2013 Mar 19;13:36. (PMID: 23506294)
Int J Infect Dis. 2015 May;34:90-5. (PMID: 25796432)
J Trop Pediatr. 2008 Dec;54(6):401-5. (PMID: 18593738)
J Med Virol. 2003 Sep;71(1):82-93. (PMID: 12858413)
J Med Virol. 2008 Oct;80(10):1749-55. (PMID: 18712816)
J Clin Virol. 2012 Jun;54(2):162-7. (PMID: 22410133)
Epidemiol Infect. 2020 Oct 01;148:e245. (PMID: 32998792)
Food Environ Virol. 2021 Mar;13(1):1-31. (PMID: 33501612)
J Gen Virol. 2004 Jan;85(Pt 1):89-95. (PMID: 14718623)
J Clin Microbiol. 2007 Jul;45(7):2197-204. (PMID: 17507520)
Infect Genet Evol. 2012 Dec;12(8):1892-8. (PMID: 22964045)
فهرسة مساهمة: Keywords: Burkina Faso; Enteric hepatitis viruses; Gastroenteric viruses; Systematic review and meta-analysis
تواريخ الأحداث: Date Created: 20240730 Date Completed: 20240731 Latest Revision: 20240802
رمز التحديث: 20240802
مُعرف محوري في PubMed: PMC11290313
DOI: 10.1186/s12879-024-09668-4
PMID: 39080551
قاعدة البيانات: MEDLINE
الوصف
تدمد:1471-2334
DOI:10.1186/s12879-024-09668-4