دورية أكاديمية
أعرض في EDS

Genome-wide identification of SHMT family genes in alfalfa (Medicago sativa) and its functional analyses under various abiotic stresses.

التفاصيل البيبلوغرافية
العنوان: Genome-wide identification of SHMT family genes in alfalfa (Medicago sativa) and its functional analyses under various abiotic stresses.
المؤلفون: Gao R; College of Pratacultural Science, Key Laboratory of Grassland Ecosystem, Ministry of Education, Pratacultural Engineering Laboratory of Gansu Province, Sino-U.S. Center for Grazingland Ecosystem Sustainability, Gansu Agricultural University (36.0° N, 103 8° E), Yingmencun, Anning District, Gansu province, Lanzhou, Gansu, 730070, China., Chen L; College of Pratacultural Science, Key Laboratory of Grassland Ecosystem, Ministry of Education, Pratacultural Engineering Laboratory of Gansu Province, Sino-U.S. Center for Grazingland Ecosystem Sustainability, Gansu Agricultural University (36.0° N, 103 8° E), Yingmencun, Anning District, Gansu province, Lanzhou, Gansu, 730070, China., Chen F; College of Pratacultural Science, Key Laboratory of Grassland Ecosystem, Ministry of Education, Pratacultural Engineering Laboratory of Gansu Province, Sino-U.S. Center for Grazingland Ecosystem Sustainability, Gansu Agricultural University (36.0° N, 103 8° E), Yingmencun, Anning District, Gansu province, Lanzhou, Gansu, 730070, China., Ma H; College of Pratacultural Science, Key Laboratory of Grassland Ecosystem, Ministry of Education, Pratacultural Engineering Laboratory of Gansu Province, Sino-U.S. Center for Grazingland Ecosystem Sustainability, Gansu Agricultural University (36.0° N, 103 8° E), Yingmencun, Anning District, Gansu province, Lanzhou, Gansu, 730070, China. mahl@gsau.edu.cn.
المصدر: BMC genomics [BMC Genomics] 2024 Aug 12; Vol. 25 (1), pp. 781. Date of Electronic Publication: 2024 Aug 12.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE
أسماء مطبوعة: Original Publication: London : BioMed Central, [2000-
مواضيع طبية MeSH: Medicago sativa*/genetics , Stress, Physiological*/genetics , Phylogeny* , Glycine Hydroxymethyltransferase*/genetics , Glycine Hydroxymethyltransferase*/metabolism , Multigene Family* , Gene Expression Regulation, Plant*, Genome, Plant ; Plant Proteins/genetics ; Plant Proteins/metabolism ; Gene Expression Profiling ; Droughts ; Promoter Regions, Genetic
مستخلص: Background: Alfalfa (Medicago sativa L.) is the most widely planted legume forage and one of the most economically valuable crops in the world. Serine hydroxymethyltransferase (SHMT), a pyridoxal phosphate-dependent enzyme, plays crucial roles in plant growth, development, and stress responses. To date, there has been no comprehensive bioinformatics investigation conducted on the SHMT genes in M. sativa.
Results: Here, we systematically analyzed the phylogenetic relationship, expansion pattern, gene structure, cis-acting elements, and expression profile of the MsSHMT family genes. The result showed that a total of 15 SHMT members were identified from the M. sativa genome database. Phylogenetic analysis demonstrated that the MsSHMTs can be divided into 4 subgroups and conserved with other plant homologues. Gene structure analysis found that the exons of MsSHMTs ranges from 3 to 15. Analysis of cis-acting elements found that each of the MsSHMT genes contained different kinds of hormones and stress-related cis-acting elements in their promoter regions. Expression and function analysis revealed that MsSHMTs expressed in all plant tissues. qRT-PCR analysis showed that MsSHMTs induced by ABA, Salt, and drought stresses.
Conclusions: These results provided definite evidence that MsSHMTs might involve in growth, development and adversity responses in M. sativa, which laid a foundation for future functional studies of MsSHMTs.
(© 2024. The Author(s).)
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فهرسة مساهمة: Keywords: Medicago sativa; Abiotic stresses; Hormones; Serine hydroxymethyltransferase
المشرفين على المادة: EC 2.1.2.1 (Glycine Hydroxymethyltransferase)
0 (Plant Proteins)
تواريخ الأحداث: Date Created: 20240812 Date Completed: 20240812 Latest Revision: 20240815
رمز التحديث: 20240815
مُعرف محوري في PubMed: PMC11318161
DOI: 10.1186/s12864-024-10637-z
PMID: 39134931
قاعدة البيانات: MEDLINE
الوصف
تدمد:1471-2164
DOI:10.1186/s12864-024-10637-z