دورية أكاديمية

Leaf age structures phyllosphere microbial communities in the field and greenhouse.

التفاصيل البيبلوغرافية
العنوان: Leaf age structures phyllosphere microbial communities in the field and greenhouse.
المؤلفون: Geyer JK; Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.; Department of Genetics, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States., Grunberg RL; Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.; Wilson Center for Science and Justice at Duke Law, Durham, NC, United States., Wang J; Department of Genetics, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States., Mitchell CE; Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.; Environment, Ecology, and Energy Program, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
المصدر: Frontiers in microbiology [Front Microbiol] 2024 Aug 14; Vol. 15, pp. 1429166. Date of Electronic Publication: 2024 Aug 14 (Print Publication: 2024).
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Frontiers Research Foundation Country of Publication: Switzerland NLM ID: 101548977 Publication Model: eCollection Cited Medium: Print ISSN: 1664-302X (Print) Linking ISSN: 1664302X NLM ISO Abbreviation: Front Microbiol Subsets: PubMed not MEDLINE
أسماء مطبوعة: Original Publication: Lausanne : Frontiers Research Foundation
مستخلص: The structure of the leaf microbiome can alter host fitness and change in response to abiotic and biotic factors, like seasonality, climate, and leaf age. However, relatively few studies consider the influence of host age on microbial communities at a time scale of a few days, a short time scale relevant to microbes. To understand how host age modulates changes in the fungal and bacterial leaf microbiome on a short time scale, we ran independent field and greenhouse-based studies and characterized phyllosphere communities using next-generation sequencing approaches. Our field study characterized changes in the fungal and bacterial phyllosphere by examining leaves of different relative ages across individuals, whereas the greenhouse study examined changes in the fungal microbiome by absolute leaf age across individuals. Together, these results indicate that fungal communities are susceptible to change as a leaf ages as evidenced by shifts in the diversity of fungal taxa both in the field and the greenhouse. Similarly, there were increases in the diversity of fungal taxa by leaf age in the greenhouse. In bacterial communities in the field, we observed changes in the diversity, composition, and relative abundance of common taxa. These findings build upon previous literature characterizing host-associated communities at longer time scales and provide a foundation for targeted work examining how specific microbial taxa might interact with each other, such as fine-scale interactions between pathogenic and non-pathogenic species.
Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
(Copyright © 2024 Geyer, Grunberg, Wang and Mitchell.)
References: Microbiol Res. 2017 Nov;204:55-64. (PMID: 28870292)
Nat Rev Microbiol. 2012 Jul 16;10(8):538-50. (PMID: 22796884)
Ecol Lett. 2020 Mar;23(3):506-517. (PMID: 31863571)
J Anim Ecol. 2008 Nov;77(6):1274-87. (PMID: 18557955)
Braz J Microbiol. 2011 Jul;42(3):878-83. (PMID: 24031703)
BMC Microbiol. 2022 Feb 8;22(1):49. (PMID: 35135483)
PLoS One. 2014 Feb 28;9(2):e90234. (PMID: 24587293)
PLoS Comput Biol. 2014 Apr 03;10(4):e1003531. (PMID: 24699258)
Mol Ecol. 2022 Aug;31(15):4127-4145. (PMID: 35661299)
Front Chem. 2014 Nov 04;2:95. (PMID: 25408942)
Oecologia. 2012 Mar;168(3):621-9. (PMID: 21983641)
PLoS One. 2023 Oct 27;18(10):e0293495. (PMID: 37889914)
PLoS One. 2011;6(8):e23321. (PMID: 21886785)
Plant Mol Biol. 2016 Apr;90(6):645-55. (PMID: 26646287)
Nucleic Acids Res. 2015 Jan;43(Database issue):D593-8. (PMID: 25414355)
Nat Methods. 2016 Jul;13(7):581-3. (PMID: 27214047)
Proc Biol Sci. 2018 Nov 7;285(1890):. (PMID: 30404885)
Nat Commun. 2016 Jul 12;7:12151. (PMID: 27402057)
PLoS One. 2013;8(2):e55731. (PMID: 23383346)
Gut Pathog. 2016 May 26;8:24. (PMID: 27239228)
J Appl Microbiol. 2014 Jan;116(1):109-22. (PMID: 23889706)
J Ecol. 2022 Sep;110(9):2046-2061. (PMID: 36250132)
Mol Ecol. 2021 May;30(10):2404-2416. (PMID: 33740826)
Can J Microbiol. 2006 May;52(5):419-26. (PMID: 16699566)
Mol Plant Microbe Interact. 2010 Apr;23(4):473-84. (PMID: 20192834)
Front Microbiol. 2015 Sep 07;6:869. (PMID: 26441846)
Ecol Lett. 2017 Oct;20(10):1285-1294. (PMID: 28868666)
Mol Ecol. 2013 Nov;22(21):5271-7. (PMID: 24112409)
Mol Plant Microbe Interact. 2015 Mar;28(3):212-7. (PMID: 25514681)
Bioinformatics. 2018 Sep 15;34(18):3094-3100. (PMID: 29750242)
Appl Environ Microbiol. 2008 Apr;74(8):2461-70. (PMID: 18296538)
BMC Biol. 2014 Nov 12;12:87. (PMID: 25387460)
mBio. 2014 Jan 21;5(1):e00682-13. (PMID: 24449749)
فهرسة مساهمة: Keywords: metabarcoding; microbiome; mycobiome; phyllosphere; succession
تواريخ الأحداث: Date Created: 20240829 Latest Revision: 20240903
رمز التحديث: 20240903
مُعرف محوري في PubMed: PMC11349622
DOI: 10.3389/fmicb.2024.1429166
PMID: 39206365
قاعدة البيانات: MEDLINE
الوصف
تدمد:1664-302X
DOI:10.3389/fmicb.2024.1429166