دورية أكاديمية
أعرض في EDS

Genome-wide identification and expression analyses of SWEET gene family reveal potential roles in plant development, fruit ripening and abiotic stress responses in cranberry ( Vaccinium macrocarpon Ait).

التفاصيل البيبلوغرافية
العنوان: Genome-wide identification and expression analyses of SWEET gene family reveal potential roles in plant development, fruit ripening and abiotic stress responses in cranberry ( Vaccinium macrocarpon Ait).
المؤلفون: Chen L; Jilin Agricultural University, College of Horticulture, Changchun, China., Cai M; Jilin Agricultural University, College of Horticulture, Changchun, China., Liu J; Jilin Agricultural University, College of Horticulture, Changchun, China., Jiang X; Jilin Agricultural University, College of Horticulture, Changchun, China., Liu J; Jilin Agricultural University, College of Horticulture, Changchun, China., Zhenxing W; Jilin Agricultural University, College of Horticulture, Changchun, China., Wang Y; Institute of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, China., Li Y; Jilin Agricultural University, College of Horticulture, Changchun, China.
المصدر: PeerJ [PeerJ] 2024 Sep 19; Vol. 12, pp. e17974. Date of Electronic Publication: 2024 Sep 19 (Print Publication: 2024).
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: PeerJ Inc Country of Publication: United States NLM ID: 101603425 Publication Model: eCollection Cited Medium: Internet ISSN: 2167-8359 (Electronic) Linking ISSN: 21678359 NLM ISO Abbreviation: PeerJ Subsets: MEDLINE
أسماء مطبوعة: Original Publication: Corte Madera, CA : PeerJ Inc.
مواضيع طبية MeSH: Vaccinium macrocarpon*/genetics , Vaccinium macrocarpon*/metabolism , Vaccinium macrocarpon*/chemistry , Gene Expression Regulation, Plant* , Stress, Physiological*/genetics , Fruit*/genetics , Fruit*/growth & development , Fruit*/metabolism , Plant Proteins*/genetics , Plant Proteins*/metabolism, Multigene Family ; Monosaccharide Transport Proteins/genetics ; Monosaccharide Transport Proteins/metabolism ; Phylogeny ; Genome, Plant ; Plant Development/genetics ; Chromosomes, Plant/genetics ; Synteny/genetics
مستخلص: The sugars will eventually be exported transporter (SWEET) family is a novel class of sugar transporters that play a crucial role in plant growth, development, and responses to stress. Cranberry ( Vaccinium macrocarpon Ait.) is a nutritious berry with economic importance, but little is known about SWEET gene family functions in this small fruit. In this research, 13 VmSWEET genes belonging to four clades were identified in the cranberry genome for the first time. In the conserved domains, we observed seven phosphorylation sites and four amino acid residues that might be crucial for the binding function. The majority of VmSWEET genes in each clade shared similar gene structures and conserved motifs, showing that the VmSWEET genes were highly conserved during evolution. Chromosomal localization and duplication analyses showed that VmSWEET genes were unevenly distributed in eight chromosomes and two pairs of them displayed synteny. A total of 79 cis -acting elements were predicted in the promoter regions of VmSWEETs including elements responsive to plant hormones, light, growth and development and stress responses. qRT-PCR analysis showed that VmSWEET10.1 was highly expressed in flowers, VmSWEET16 was highly expressed in upright and runner stems, and VmSWEET3 was highly expressed in the leaves of both types of stems. In fruit, the expression of VmSWEET14 and VmSWEET16 was highest of all members during the young fruit stage and were downregulated as fruit matured. The expression of VmSWEET4 was higher during later developmental stages than earlier developmental stages. Furthermore, qRT-PCR results revealed a significant up-regulation of VmSWEET10.2 , under osmotic, saline, salt-alkali, and aluminum stress conditions, suggesting it has a crucial role in mediating plant responses to various environmental stresses. Overall, these results provide new insights into the characteristics and evolution of VmSWEET genes. Moreover, the candidate VmSWEET genes involved in the growth, development and abiotic stress responses can be used for molecular breeding to improve cranberry fruit quality and abiotic stress resistance.
Competing Interests: The authors declare there are no competing interests.
(©2024 Chen et al.)
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فهرسة مساهمة: Keywords: Abiotic stress; Bioinformatics analysis; Cranberry; Expression analysis; Growth and development; SWEET
المشرفين على المادة: 0 (Plant Proteins)
0 (Monosaccharide Transport Proteins)
تواريخ الأحداث: Date Created: 20240923 Date Completed: 20240923 Latest Revision: 20240924
رمز التحديث: 20240924
مُعرف محوري في PubMed: PMC11416763
DOI: 10.7717/peerj.17974
PMID: 39308825
قاعدة البيانات: MEDLINE
الوصف
تدمد:2167-8359
DOI:10.7717/peerj.17974