Basis of Protein Stabilization by K Glutamate: Unfavorable Interactions with Carbon, Oxygen Groups

التفاصيل البيبلوغرافية
العنوان: Basis of Protein Stabilization by K Glutamate: Unfavorable Interactions with Carbon, Oxygen Groups
المؤلفون: Xian Cheng, Rachel O.L. Wong, Irina A. Shkel, M. Thomas Record, Rituparna Sengupta, Evan Buechel, Emily J. Guinn
المصدر: Biophysical Journal. 111:1854-1865
بيانات النشر: Elsevier BV, 2016.
سنة النشر: 2016
مصطلحات موضوعية: 0301 basic medicine, Osmosis, 030102 biochemistry & molecular biology, Protein Stability, New and Notable, Stereochemistry, Escherichia coli Proteins, Inorganic chemistry, Biophysics, Cationic polymerization, Glutamic Acid, Glutamic acid, Carbon, Oxygen, 03 medical and health sciences, chemistry.chemical_compound, 030104 developmental biology, Solubility, chemistry, Osmolyte, Amide, Protein folding, Carboxylate, Protein stabilization
الوصف: Potassium glutamate (KGlu) is the primary Escherichia coli cytoplasmic salt. After sudden osmotic upshift, cytoplasmic KGlu concentration increases, initially because of water efflux and subsequently by K + transport and Glu − synthesis, allowing water uptake and resumption of growth at high osmolality. In vitro, KGlu ranks with Hofmeister salts KF and K 2 SO 4 in driving protein folding and assembly. Replacement of KCl by KGlu stabilizes protein-nucleic acid complexes. To interpret and predict KGlu effects on protein processes, preferential interactions of KGlu with 15 model compounds displaying six protein functional groups—sp 3 (aliphatic) C; sp 2 (aromatic, amide, carboxylate) C; amide and anionic (carboxylate) O; and amide and cationic N—were determined by osmometry or solubility assays. Analysis of these data yields interaction potentials ( α -values) quantifying non-Coulombic chemical interactions of KGlu with unit area of these six groups. Interactions of KGlu with the 15 model compounds predicted from these six α -values agree well with experimental data. KGlu interactions with all carbon groups and with anionic (carboxylate) and amide oxygen are unfavorable, while KGlu interactions with cationic and amide nitrogen are favorable. These α -values, together with surface area information, provide quantitative predictions of why KGlu is an effective E. coli cytoplasmic osmolyte (because of the dominant effect of unfavorable interactions of KGlu with anionic and amide oxygens and hydrocarbon groups on the water-accessible surface of cytoplasmic biopolymers) and why KGlu is a strong stabilizer of folded proteins (because of the dominant effect of unfavorable interactions of KGlu with hydrocarbon groups and amide oxygens exposed in unfolding).
تدمد: 0006-3495
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::861361c31f02955bddd3e0d3e64f27df
https://doi.org/10.1016/j.bpj.2016.08.050
حقوق: OPEN
رقم الأكسشن: edsair.doi.dedup.....861361c31f02955bddd3e0d3e64f27df
قاعدة البيانات: OpenAIRE