دورية أكاديمية

De novo transcriptome analysis provides insights into the salt tolerance of Podocarpus macrophyllus under salinity stress

التفاصيل البيبلوغرافية
العنوان: De novo transcriptome analysis provides insights into the salt tolerance of Podocarpus macrophyllus under salinity stress
المؤلفون: Lijuan Zou, Taotao Li, Bingbing Li, Jing He, Chunli Liao, Lianzhe Wang, Shouyu Xue, Tao Sun, Xuan Ma, Qinggui Wu
المصدر: BMC Plant Biology, Vol 21, Iss 1, Pp 1-17 (2021)
بيانات النشر: BMC, 2021.
سنة النشر: 2021
المجموعة: LCC:Botany
مصطلحات موضوعية: Podocarpus macrophyllus, Salt stress, Transcriptome, Phytohormone, Transcription factor, Botany, QK1-989
الوصف: Abstract Background Soil salinization is causing ecosystem degradation and crop yield reduction worldwide, and elucidation of the mechanism of salt-tolerant plants to improve crop yield is highly significant. Podocarpus macrophyllus is an ancient gymnosperm species with a unique environmental adaptation strategy that may be attributed to its lengthy evolutionary process. The present study investigated the physiological and molecular responses of P. macrophyllus plants to salt stress by analyzing its photosynthetic system and antioxidant enzyme activity. We also analyzed the differentially expressed genes (DEGs) in P. macrophyllus under salt stress using RNA sequencing and de novo transcriptome assembly. Results Salt treatment significantly affected the photosynthetic system in P. macrophyllus seedlings, which decreased chlorophyll content, altered chloroplast ultrastructure, and reduced photosynthesis. The activities of antioxidant enzymes increased significantly following salt stress treatment. Transcriptome analysis showed that salt stress induced a large number of genes involved in multiple metabolic and biological regulation processes. The transcription levels of genes that mediate phytohormone transport or signaling were altered. K+ and Ca2+ transporter-encoding genes and the MYB transcription factor were upregulated under salt stress. However, the genes involved in cell wall biosynthesis and secondary metabolism were downregulated. Conclusion Our research identified some important pathways and putative genes involved in salt tolerance in P. macrophyllus and provided clues for elucidating the mechanism of salt tolerance and the utilization of the salt tolerance genes of P. macrophyllus for crop improvement.
نوع الوثيقة: article
وصف الملف: electronic resource
اللغة: English
تدمد: 1471-2229
Relation: https://doaj.org/toc/1471-2229
DOI: 10.1186/s12870-021-03274-1
URL الوصول: https://doaj.org/article/061d92f595d84a7a9dbe5dd5f160b0d4
رقم الأكسشن: edsdoj.061d92f595d84a7a9dbe5dd5f160b0d4
قاعدة البيانات: Directory of Open Access Journals
الوصف
تدمد:14712229
DOI:10.1186/s12870-021-03274-1