دورية أكاديمية
Spatial and Texture Analysis of Root System distribution with Earth mover’s Distance (STARSEED)
| العنوان: | Spatial and Texture Analysis of Root System distribution with Earth mover’s Distance (STARSEED) |
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| المؤلفون: | Joshua Peeples, Weihuang Xu, Romain Gloaguen, Diane Rowland, Alina Zare, Zachary Brym |
| المصدر: | Plant Methods, Vol 19, Iss 1, Pp 1-15 (2023) |
| بيانات النشر: | BMC, 2023. |
| سنة النشر: | 2023 |
| المجموعة: | LCC:Plant culture LCC:Biology (General) |
| مصطلحات موضوعية: | Root architecture, Earth Mover’s Distance, Image analysis, Sesamum indicum, Artificial Intelligence, Plant culture, SB1-1110, Biology (General), QH301-705.5 |
| الوصف: | Abstract Purpose Root system architectures are complex and challenging to characterize effectively for agronomic and ecological discovery. Methods We propose a new method, Spatial and Texture Analysis of Root SystEm distribution with Earth mover’s Distance (STARSEED), for comparing root system distributions that incorporates spatial information through a novel application of the Earth Mover’s Distance (EMD). Results We illustrate that the approach captures the response of sesame root systems for different genotypes and soil moisture levels. STARSEED provides quantitative and visual insights into changes that occur in root architectures across experimental treatments. Conclusion STARSEED can be generalized to other plants and provides insight into root system architecture development and response to varying growth conditions not captured by existing root architecture metrics and models. The code and data for our experiments are publicly available: https://github.com/GatorSense/STARSEED . |
| نوع الوثيقة: | article |
| وصف الملف: | electronic resource |
| اللغة: | English |
| تدمد: | 1746-4811 |
| Relation: | https://doaj.org/toc/1746-4811 |
| DOI: | 10.1186/s13007-022-00974-z |
| URL الوصول: | https://doaj.org/article/cda3f89de978402f96d3afd290f396b9 |
| رقم الأكسشن: | edsdoj.3f89de978402f96d3afd290f396b9 |
| قاعدة البيانات: | Directory of Open Access Journals |
Find this article in full text from Springer Verlag. 
Full Text Finder | تدمد: | 17464811 |
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| DOI: | 10.1186/s13007-022-00974-z |