دورية أكاديمية

DANCE: a deep learning library and benchmark platform for single-cell analysis

التفاصيل البيبلوغرافية
العنوان: DANCE: a deep learning library and benchmark platform for single-cell analysis
المؤلفون: Jiayuan Ding, Renming Liu, Hongzhi Wen, Wenzhuo Tang, Zhaoheng Li, Julian Venegas, Runze Su, Dylan Molho, Wei Jin, Yixin Wang, Qiaolin Lu, Lingxiao Li, Wangyang Zuo, Yi Chang, Yuying Xie, Jiliang Tang
المصدر: Genome Biology, Vol 25, Iss 1, Pp 1-28 (2024)
بيانات النشر: BMC, 2024.
سنة النشر: 2024
المجموعة: LCC:Biology (General)
LCC:Genetics
مصطلحات موضوعية: Deep learning, Benchmarking, Single-cell multimodal analysis, Single-cell spatial analysis, Gene imputation, Cell type annotation, Biology (General), QH301-705.5, Genetics, QH426-470
الوصف: Abstract DANCE is the first standard, generic, and extensible benchmark platform for accessing and evaluating computational methods across the spectrum of benchmark datasets for numerous single-cell analysis tasks. Currently, DANCE supports 3 modules and 8 popular tasks with 32 state-of-art methods on 21 benchmark datasets. People can easily reproduce the results of supported algorithms across major benchmark datasets via minimal efforts, such as using only one command line. In addition, DANCE provides an ecosystem of deep learning architectures and tools for researchers to facilitate their own model development. DANCE is an open-source Python package that welcomes all kinds of contributions.
نوع الوثيقة: article
وصف الملف: electronic resource
اللغة: English
تدمد: 1474-760X
Relation: https://doaj.org/toc/1474-760X
DOI: 10.1186/s13059-024-03211-z
URL الوصول: https://doaj.org/article/82df36dc168a46dcab46d25ab356cce5
رقم الأكسشن: edsdoj.82df36dc168a46dcab46d25ab356cce5
قاعدة البيانات: Directory of Open Access Journals
الوصف
تدمد:1474760X
DOI:10.1186/s13059-024-03211-z