دورية أكاديمية

Multi-Objective Optimization of Microalgae Metabolism: An Evolutive Algorithm Based on FBA

التفاصيل البيبلوغرافية
العنوان: Multi-Objective Optimization of Microalgae Metabolism: An Evolutive Algorithm Based on FBA
المؤلفون: Monica Fabiola Briones-Baez, Luciano Aguilera-Vazquez, Nelson Rangel-Valdez, Ana Lidia Martinez-Salazar, Cristal Zuñiga
المصدر: Metabolites, Vol 12, Iss 7, p 603 (2022)
بيانات النشر: MDPI AG, 2022.
سنة النشر: 2022
المجموعة: LCC:Microbiology
مصطلحات موضوعية: cell metabolism, FBA, multi-objective optimization, nsgaii, Microbiology, QR1-502
الوصف: Studies enabled by metabolic models of different species of microalgae have become significant since they allow us to understand changes in their metabolism and physiological stages. The most used method to study cell metabolism is FBA, which commonly focuses on optimizing a single objective function. However, recent studies have brought attention to the exploration of simultaneous optimization of multiple objectives. Such strategies have found application in optimizing biomass and several other bioproducts of interest; they usually use approaches such as multi-level models or enumerations schemes. This work proposes an alternative in silico multiobjective model based on an evolutionary algorithm that offers a broader approximation of the Pareto frontier, allowing a better angle for decision making in metabolic engineering. The proposed strategy is validated on a reduced metabolic network of the microalgae Chlamydomonas reinhardtii while optimizing for the production of protein, carbohydrates, and CO2 uptake. The results from the conducted experimental design show a favorable difference in the number of solutions achieved compared to a classic tool solving FBA.
نوع الوثيقة: article
وصف الملف: electronic resource
اللغة: English
تدمد: 2218-1989
Relation: https://www.mdpi.com/2218-1989/12/7/603; https://doaj.org/toc/2218-1989
DOI: 10.3390/metabo12070603
URL الوصول: https://doaj.org/article/aad9978727b14afca87e8558ee0e2992
رقم الأكسشن: edsdoj.9978727b14afca87e8558ee0e2992
قاعدة البيانات: Directory of Open Access Journals
الوصف
تدمد:22181989
DOI:10.3390/metabo12070603