دورية أكاديمية
Flux variability analysis: application to developing oilseed rape embryos using toolboxes for constraint-based modeling.
| العنوان: | Flux variability analysis: application to developing oilseed rape embryos using toolboxes for constraint-based modeling. |
|---|---|
| المؤلفون: | Hay JO; Biosciences Department, Brookhaven National Laboratory, Upton, NY, USA., Schwender J |
| المصدر: | Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2014; Vol. 1090, pp. 301-16. |
| نوع المنشور: | Journal Article; Research Support, U.S. Gov't, Non-P.H.S. |
| اللغة: | English |
| بيانات الدورية: | Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium: Internet ISSN: 1940-6029 (Electronic) Linking ISSN: 10643745 NLM ISO Abbreviation: Methods Mol Biol Subsets: MEDLINE |
| أسماء مطبوعة: | Publication: Totowa, NJ : Humana Press Original Publication: Clifton, N.J. : Humana Press, |
| مواضيع طبية MeSH: | Metabolic Flux Analysis* , Models, Biological* , Software*, Brassica napus/*metabolism , Seeds/*metabolism, Carbohydrate Metabolism ; Computer Simulation ; Metabolic Networks and Pathways |
| مستخلص: | Flux variability analysis enables comprehensive exploration of alternate optimal routes in a metabolic network. This method is especially useful with models such as bna572 for the developing oilseed rape embryo which is highly compartmentalized. Here, we describe a protocol for carrying out flux variability analysis on reactions and network projections of bna572 using well-established software (CellNetAnalyzer and COBRA) for constraint-based analysis of stoichiometric network reconstructions. |
| تواريخ الأحداث: | Date Created: 20131114 Date Completed: 20140703 Latest Revision: 20131113 |
| رمز التحديث: | 20240628 |
| DOI: | 10.1007/978-1-62703-688-7_18 |
| PMID: | 24222423 |
| قاعدة البيانات: | MEDLINE |
| تدمد: | 1940-6029 |
|---|---|
| DOI: | 10.1007/978-1-62703-688-7_18 |