دورية أكاديمية

Identifying the similarities and differences between single nucleotide polymorphism array (SNPa) analysis and karyotyping in acute myeloid leukemia and myelodysplastic syndromes.

التفاصيل البيبلوغرافية
العنوان: Identifying the similarities and differences between single nucleotide polymorphism array (SNPa) analysis and karyotyping in acute myeloid leukemia and myelodysplastic syndromes.
المؤلفون: Noronha TR; Universidade Federal de São Paulo (UNIFESP), São Paulo, SP, Brazil. Electronic address: thinoronha@yahoo.com.br., Rohr SS; Universidade Federal de São Paulo (UNIFESP), São Paulo, SP, Brazil., Chauffaille Mde L; Universidade Federal de São Paulo (UNIFESP), São Paulo, SP, Brazil; Grupo Fleury, São Paulo, Brazil.
المصدر: Revista brasileira de hematologia e hemoterapia [Rev Bras Hematol Hemoter] 2015 Jan-Feb; Vol. 37 (1), pp. 48-54. Date of Electronic Publication: 2014 Nov 21.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Elsevier Country of Publication: Brazil NLM ID: 101220159 Publication Model: Print-Electronic Cited Medium: Print ISSN: 1516-8484 (Print) Linking ISSN: 15168484 NLM ISO Abbreviation: Rev Bras Hematol Hemoter Subsets: PubMed not MEDLINE
أسماء مطبوعة: Publication: 2014- : [Rio de Janeiro, Brazil] : Elsevier
Original Publication: Rio de Janeiro : Sociedade Brasileira de Hematologia e Hemoterapia
مستخلص: Objective: To standardize the single nucleotide polymorphism array (SNPa) method in acute myeloid leukemia/myelodysplastic syndromes, and to identify the similarities and differences between the results of this method and karyotyping.
Methods: Twenty-two patients diagnosed with acute myeloid leukemia and three with myelodysplastic syndromes were studied. The G-banding karyotyping and single nucleotide polymorphism array analysis (CytoScan(®) HD) were performed using cells from bone marrow, DNA extracted from mononuclear cells from bone marrow and buccal cells (BC).
Results: The mean age of the patients studied was 54 years old, and the median age was 55 years (range: 28-93). Twelve (48%) were male and 13 (52%) female. Ten patients showed abnormal karyotypes (40.0%), 11 normal (44.0%) and four had no mitosis (16.0%). Regarding the results of bone marrow single nucleotide polymorphism array analysis: 17 were abnormal (68.0%) and eight were normal (32.0%). Comparing the two methods, karyotyping identified a total of 17 alterations (8 deletions/losses, 7 trissomies/gains, and 2 translocations) and single nucleotide polymorphism array analysis identified a total of 42 alterations (17 losses, 16 gains and 9 copy-neutral loss of heterozygosity).
Conclusion: It is possible to standardize single nucleotide polymorphism array analysis in acute myeloid leukemia/myelodysplastic syndromes and compare the results with the abnormalities detected by karyotyping. Single nucleotide polymorphism array analysis increased the detection rate of abnormalities compared to karyotyping and also identified a new set of abnormalities that deserve further investigation in future studies.
(Copyright © 2014 Associação Brasileira de Hematologia, Hemoterapia e Terapia Celular. Published by Elsevier Editora Ltda. All rights reserved.)
References: Braz J Med Biol Res. 2009 Nov;42(11):1110-2. (PMID: 19855907)
Blood. 2010 May 27;115(21):4157-61. (PMID: 20304806)
Am J Hematol. 2012 Nov;87(11):1010-6. (PMID: 22887079)
Proc Natl Acad Sci U S A. 2009 Aug 4;106(31):12944-9. (PMID: 19651601)
Cell. 2012 Jul 20;150(2):264-78. (PMID: 22817890)
J Clin Oncol. 2011 Dec 10;29(35):4702-8. (PMID: 22084373)
Cytogenet Genome Res. 2011;135(3-4):212-21. (PMID: 21934286)
Blood. 2010 Jan 21;115(3):453-74. (PMID: 19880497)
Ann Hematol. 2013 Apr;92(4):459-69. (PMID: 23262795)
J Hum Genet. 2008;53(11-12):983-90. (PMID: 18989737)
Leuk Res. 2010 Apr;34(4):413-5. (PMID: 19897241)
Med Oncol. 2012 Sep;29(3):2083-7. (PMID: 22116774)
Curr Hematol Malig Rep. 2011 Jun;6(2):126-35. (PMID: 21340513)
Cytogenet Genome Res. 2013;141(1):1-6. (PMID: 23817294)
Lancet. 2014 Jun 28;383(9936):2239-52. (PMID: 24656536)
Genet Med. 2013 Jun;15(6):484-94. (PMID: 23619274)
J Clin Oncol. 2009 Nov 1;27(31):5219-26. (PMID: 19770377)
Clin Lab Med. 2011 Dec;31(4):581-94, viii. (PMID: 22118738)
Med Oncol. 2013;30(2):579. (PMID: 23636907)
Am J Hum Genet. 2007 Jul;81(1):114-26. (PMID: 17564968)
Blood. 2013 Jan 10;121(2):369-77. (PMID: 23175688)
Lancet Oncol. 2014 Aug;15(9):e382-94. (PMID: 25079101)
J Clin Oncol. 2002 May 15;20(10):2480-5. (PMID: 12011125)
Nat Rev Genet. 2005 Oct;6(10):782-92. (PMID: 16145555)
Hum Mutat. 2012 Jun;33(6):941-8. (PMID: 22488943)
Am J Clin Pathol. 2014 Feb;141(2):247-55. (PMID: 24436273)
Semin Oncol. 2012 Feb;39(1):13-25. (PMID: 22289488)
Cancer Res. 2005 Jan 15;65(2):375-8. (PMID: 15695375)
Cancer Genet. 2013 Sep-Oct;206(9-10):317-26. (PMID: 24269304)
فهرسة مساهمة: Keywords: Acute myeloid leukemia; Karyotype; Loss of heterozygosity; Myelodysplastic syndromes; Single nucleotide polymorphism
تواريخ الأحداث: Date Created: 20150202 Date Completed: 20150202 Latest Revision: 20200930
رمز التحديث: 20240628
مُعرف محوري في PubMed: PMC4318843
DOI: 10.1016/j.bjhh.2014.09.011
PMID: 25638768
قاعدة البيانات: MEDLINE
الوصف
تدمد:1516-8484
DOI:10.1016/j.bjhh.2014.09.011