دورية أكاديمية

Second harmonic generation correlation spectroscopy for characterizing translationally diffusing protein nanocrystals.

التفاصيل البيبلوغرافية
العنوان: Second harmonic generation correlation spectroscopy for characterizing translationally diffusing protein nanocrystals.
المؤلفون: Dow XY; Chemistry Department, Purdue University, West Lafayette, IN 47907, USA., Dettmar CM; Chemistry Department, Purdue University, West Lafayette, IN 47907, USA., DeWalt EL; Chemistry Department, Purdue University, West Lafayette, IN 47907, USA., Newman JA; Chemistry Department, Purdue University, West Lafayette, IN 47907, USA., Dow AR; Chemistry Department, Purdue University, West Lafayette, IN 47907, USA., Roy-Chowdhury S; School of Molecular Sciences, Arizona State University, Tempe, AZ 85287-1604, USA., Coe JD; School of Molecular Sciences, Arizona State University, Tempe, AZ 85287-1604, USA., Kupitz C; School of Molecular Sciences, Arizona State University, Tempe, AZ 85287-1604, USA., Fromme P; School of Molecular Sciences, Arizona State University, Tempe, AZ 85287-1604, USA., Simpson GJ; Chemistry Department, Purdue University, West Lafayette, IN 47907, USA.
المصدر: Acta crystallographica. Section D, Structural biology [Acta Crystallogr D Struct Biol] 2016 Jul; Vol. 72 (Pt 7), pp. 849-59. Date of Electronic Publication: 2016 Jun 23.
نوع المنشور: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, N.I.H., Extramural
اللغة: English
بيانات الدورية: Publisher: John Wiley & Sons Country of Publication: United States NLM ID: 101676043 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2059-7983 (Electronic) Linking ISSN: 20597983 NLM ISO Abbreviation: Acta Crystallogr D Struct Biol Subsets: MEDLINE
أسماء مطبوعة: Publication: <2018-> : Medford, MA : John Wiley & Sons
Original Publication: [Malden, MA] : John Wiley & Sons, [2016]-
مواضيع طبية MeSH: Bacterial Proteins/*chemistry , Barium Compounds/*chemistry , Crystallization/*methods , Nanoparticles/*chemistry , Photosystem I Protein Complex/*chemistry , Spectrum Analysis/*methods , Synechococcus/*chemistry , Titanium/*chemistry, Diffusion ; Infrared Rays ; Microscopy, Electron, Scanning ; Optical Phenomena
مستخلص: Second harmonic generation correlation spectroscopy (SHG-CS) is demonstrated as a new approach to protein nanocrystal characterization. A novel line-scanning approach was performed to enable autocorrelation analysis without sample damage from the intense incident beam. An analytical model for autocorrelation was developed, which includes a correction for the optical scattering forces arising when focusing intense, infrared beams. SHG-CS was applied to the analysis of BaTiO3 nanoparticles ranging from 200 to ∼500 nm and of photosystem I nanocrystals. A size distribution was recovered for each sample and compared with the size histogram measured by scanning electron microscopy (SEM). Good agreement was observed between the two independent measurements. The intrinsic selectivity of the second-order nonlinear optical process provides SHG-CS with the ability to distinguish well ordered nanocrystals from conglomerates and amorphous aggregates. Combining the recovered distribution of particle diameters with the histogram of measured SHG intensities provides the inherent hyperpolarizability per unit volume of the SHG-active nanoparticles. Simulations suggest that the SHG activity per unit volume is likely to exhibit relatively low sensitivity to the subtle distortions within the lattice that contribute to resolution loss in X-ray diffraction, but high sensitivity to the presence of multi-domain crystals.
References: Biophys J. 2011 Jan 5;100(1):207-14. (PMID: 21190673)
Science. 2011 Dec 2;334(6060):1234-9. (PMID: 22144618)
Nature. 2013 Jan 3;493(7430):56-61. (PMID: 23254940)
Nat Methods. 2012 Jan 29;9(3):263-5. (PMID: 22286383)
Nat Biotechnol. 2011 Apr;29(4):335-40. (PMID: 21478852)
Nucleic Acids Res. 2000 Jan 1;28(1):235-42. (PMID: 10592235)
Nature. 2013 Nov 7;503(7474):85-90. (PMID: 24037379)
J Phys Chem A. 2010 Jul 29;114(29):7769-79. (PMID: 20590078)
PLoS Comput Biol. 2009 Aug;5(8):e1000474. (PMID: 19701464)
Acta Crystallogr D Biol Crystallogr. 2002 Jun;58(Pt 6 No 1):916-20. (PMID: 12037329)
Nature. 2014 Jan 9;505(7482):244-7. (PMID: 24270807)
Acta Crystallogr D Biol Crystallogr. 2013 Jan;69(Pt 1):74-81. (PMID: 23275165)
Nature. 2013 Jun 13;498(7453):190-7. (PMID: 23739333)
J Comput Chem. 2007 Sep;28(12):1996-2002. (PMID: 17450566)
Methods. 2011 Dec;55(4):387-404. (PMID: 22197730)
Rev Sci Instrum. 2014 Mar;85(3):033703. (PMID: 24689588)
Anal Chem. 2005 Jan 1;77(1):215-24. (PMID: 15623299)
Nat Struct Biol. 2003 Nov;10(11):907-12. (PMID: 14528291)
Cell Mol Life Sci. 2006 Jan;63(1):36-51. (PMID: 16314922)
Bioessays. 2012 May;34(5):361-8. (PMID: 22415816)
Acta Crystallogr D Biol Crystallogr. 2013 May;69(Pt 5):843-51. (PMID: 23633594)
Acta Crystallogr D Biol Crystallogr. 2012 Nov;68(Pt 11):1513-21. (PMID: 23090400)
Biochemistry. 2012 Aug 14;51(32):6266-88. (PMID: 22783824)
Opt Express. 2011 Jun 6;19(12):11340-54. (PMID: 21716364)
Proc Natl Acad Sci U S A. 2012 Oct 30;109(44):17891-6. (PMID: 23071311)
J Med Chem. 2012 Feb 23;55(4):1424-44. (PMID: 22239221)
Pharmacol Ther. 2013 Jun;138(3):333-408. (PMID: 23384594)
Rev Sci Instrum. 2004 Sep;75(9):2787-809. (PMID: 16878180)
Cryst Growth Des. 2014 Apr 2;14(4):2034-2047. (PMID: 24803849)
J Nanobiotechnology. 2013;11 Suppl 1:S8. (PMID: 24564891)
Anal Chem. 2010 Jan 15;82(2):491-7. (PMID: 20025250)
Biophys J. 2002 Oct;83(4):2300-17. (PMID: 12324447)
J Phys Chem B. 2005 Oct 27;109(42):20009-26. (PMID: 16853586)
Science. 2015 Jul 3;349(6243):99-103. (PMID: 26044298)
Curr Protoc Protein Sci. 2013;Chapter 17:Unit17.15. (PMID: 23546618)
Cell. 2013 Sep 12;154(6):1257-68. (PMID: 24034249)
Methods. 2011 Dec;55(4):379-86. (PMID: 22101350)
Anal Chem. 2014 Aug 19;86(16):8448-56. (PMID: 25050448)
معلومات مُعتمدة: R01 GM095583 United States GM NIGMS NIH HHS; R01 GM103401 United States GM NIGMS NIH HHS; R01 GM103910 United States GM NIGMS NIH HHS
فهرسة مساهمة: Keywords: XFEL; correlation spectroscopy; protein nanocrystals; second harmonic generation; size distribution
المشرفين على المادة: 0 (Bacterial Proteins)
0 (Barium Compounds)
0 (Photosystem I Protein Complex)
12047-27-7 (barium titanate(IV))
D1JT611TNE (Titanium)
تواريخ الأحداث: Date Created: 20160706 Date Completed: 20171025 Latest Revision: 20231111
رمز التحديث: 20231111
مُعرف محوري في PubMed: PMC4932918
DOI: 10.1107/S205979831600841X
PMID: 27377382
قاعدة البيانات: MEDLINE
الوصف
تدمد:2059-7983
DOI:10.1107/S205979831600841X