دورية أكاديمية

Bacterial carbon use plasticity, phylogenetic diversity and the priming of soil organic matter.

التفاصيل البيبلوغرافية
العنوان: Bacterial carbon use plasticity, phylogenetic diversity and the priming of soil organic matter.
المؤلفون: Morrissey EM; Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, AZ, USA.; Division of Plant and Soil Sciences, West Virginia University, Morgantown, WV, USA., Mau RL; Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, AZ, USA., Schwartz E; Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, AZ, USA.; Department of Biological Sciences, Northern Arizona University, Flagstaff, AZ, USA., McHugh TA; Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, AZ, USA.; Department of Biological Sciences, Colorado Mesa University, Grand Junction, CO, USA., Dijkstra P; Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, AZ, USA.; Department of Biological Sciences, Northern Arizona University, Flagstaff, AZ, USA., Koch BJ; Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, AZ, USA., Marks JC; Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, AZ, USA.; Department of Biological Sciences, Northern Arizona University, Flagstaff, AZ, USA., Hungate BA; Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, AZ, USA.; Department of Biological Sciences, Northern Arizona University, Flagstaff, AZ, USA.
المصدر: The ISME journal [ISME J] 2017 Aug; Vol. 11 (8), pp. 1890-1899. Date of Electronic Publication: 2017 Apr 07.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 101301086 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1751-7370 (Electronic) Linking ISSN: 17517362 NLM ISO Abbreviation: ISME J Subsets: MEDLINE
أسماء مطبوعة: Publication: 2024- : Oxford : Oxford University Press
Original Publication: London : Nature Pub. Group
مواضيع طبية MeSH: Genetic Variation* , Soil Microbiology*, Bacteria/*genetics , Bacteria/*metabolism , Carbon/*metabolism , Soil/*chemistry, Ecosystem ; Phylogeny
مستخلص: Microorganisms perform most decomposition on Earth, mediating carbon (C) loss from ecosystems, and thereby influencing climate. Yet, how variation in the identity and composition of microbial communities influences ecosystem C balance is far from clear. Using quantitative stable isotope probing of DNA, we show how individual bacterial taxa influence soil C cycling following the addition of labile C (glucose). Specifically, we show that increased decomposition of soil C in response to added glucose (positive priming) occurs as a phylogenetically diverse group of taxa, accounting for a large proportion of the bacterial community, shift toward additional soil C use for growth. Our findings suggest that many microbial taxa exhibit C use plasticity, as most taxa altered their use of glucose and soil organic matter depending upon environmental conditions. In contrast, bacteria that exhibit other responses to glucose (reduced growth or reliance on glucose for additional growth) clustered strongly by phylogeny. These results suggest that positive priming is likely the prototypical response of bacteria to sustained labile C addition, consistent with the widespread occurrence of the positive priming effect in nature.
References: ISME J. 2009 Feb;3(2):168-78. (PMID: 19005498)
Appl Environ Microbiol. 2007 Apr;73(8):2541-6. (PMID: 17322324)
Appl Environ Microbiol. 2010 Oct;76(20):6751-9. (PMID: 20729324)
PLoS One. 2014 Apr 21;9(4):e95842. (PMID: 24752604)
Environ Microbiol. 2009 Dec;11(12):3096-104. (PMID: 19638171)
PLoS One. 2009 May 27;4(5):e5695. (PMID: 19479086)
Environ Microbiol. 2015 Feb;17(2):346-63. (PMID: 25367190)
ISME J. 2016 Sep;10(9):2336-40. (PMID: 26943624)
Mol Syst Biol. 2010;6:355. (PMID: 20212527)
Glob Chang Biol. 2014 Jul;20(7):2356-67. (PMID: 24273056)
Ecol Lett. 2014 Feb;17 (2):155-64. (PMID: 24261594)
Nat Rev Microbiol. 2011 Feb;9(2):119-30. (PMID: 21233850)
Trends Microbiol. 2015 Feb;23(2):99-109. (PMID: 25475882)
Appl Environ Microbiol. 2001 Oct;67(10):4742-51. (PMID: 11571180)
New Phytol. 2005 Feb;165(2):351-71. (PMID: 15720649)
Front Microbiol. 2015 Oct 02;6:1013. (PMID: 26483764)
Sci Rep. 2015 May 11;5:10102. (PMID: 25960162)
Front Microbiol. 2016 Jan 05;6:1486. (PMID: 26779143)
Ecol Lett. 2011 Feb;14(2):187-94. (PMID: 21176050)
Int J Evol Biol. 2011 Mar 03;2011:781642. (PMID: 21461370)
Front Microbiol. 2011 May 02;2:94. (PMID: 21833332)
Ecology. 2015 Apr;96(4):1139-49. (PMID: 26230033)
Nat Methods. 2010 May;7(5):335-6. (PMID: 20383131)
Front Microbiol. 2013 Sep 10;4:253. (PMID: 24058360)
ISME J. 2015 Jun;9(6):1477-80. (PMID: 25350158)
Ecology. 2016 Oct;97(10 ):2834-2843. (PMID: 27859104)
BMC Bioinformatics. 2008 Sep 19;9:386. (PMID: 18803844)
BMC Microbiol. 2012 Apr 17;12:56. (PMID: 22510143)
J Bacteriol. 1984 Jul;159(1):243-50. (PMID: 6429122)
Bioinformatics. 2010 Jun 1;26(11):1463-4. (PMID: 20395285)
Nucleic Acids Res. 2011 Jul;39(Web Server issue):W475-8. (PMID: 21470960)
Appl Environ Microbiol. 2015 Nov;81(21):7570-81. (PMID: 26296731)
Microbiome. 2014 Feb 24;2(1):6. (PMID: 24558975)
Ecology. 2007 Jun;88(6):1354-64. (PMID: 17601128)
ISME J. 2012 Mar;6(3):610-8. (PMID: 22134646)
Science. 2014 May 2;344(6183):508-9. (PMID: 24762538)
المشرفين على المادة: 0 (Soil)
7440-44-0 (Carbon)
تواريخ الأحداث: Date Created: 20170408 Date Completed: 20180116 Latest Revision: 20181202
رمز التحديث: 20231215
مُعرف محوري في PubMed: PMC5520031
DOI: 10.1038/ismej.2017.43
PMID: 28387774
قاعدة البيانات: MEDLINE
الوصف
تدمد:1751-7370
DOI:10.1038/ismej.2017.43