دورية أكاديمية

DNA polymerase η mutational signatures are found in a variety of different types of cancer.

التفاصيل البيبلوغرافية
العنوان: DNA polymerase η mutational signatures are found in a variety of different types of cancer.
المؤلفون: Rogozin IB; a National Center for Biotechnology Information, National Library of Medicine , National Institutes of Health , Bethesda , MD , USA., Goncearenco A; a National Center for Biotechnology Information, National Library of Medicine , National Institutes of Health , Bethesda , MD , USA., Lada AG; b Department Microbiology and Molecular Genetics , University of California , Davis , CA , USA., De S; c Rutgers Cancer Institute of New Jersey , Rutgers University , New Brunswick , NJ , USA., Yurchenko V; d Life Science Research Center , University of Ostrava, 71000 Ostrava , Czech Republic., Nudelman G; e Systems Biology Center , Icahn School of Medicine at Mount Sinai , New York , New York 10029 , USA., Panchenko AR; a National Center for Biotechnology Information, National Library of Medicine , National Institutes of Health , Bethesda , MD , USA., Cooper DN; f Institute of Medical Genetics, School of Medicine , Cardiff University , UK., Pavlov YI; g Eppley Institute for Research in Cancer and Allied Diseases , University of Nebraska Medical Center , Omaha , NE 68198, USA.; h Departments of Microbiology and Pathology , University of Nebraska Medical Center , Omaha , NE , USA.; i Biochemistry and Molecular Biology , University of Nebraska Medical Center , Omaha , NE , USA.; j Genetics, Cell Biology and Anatomy , University of Nebraska Medical Center , Omaha , NE , USA.
المصدر: Cell cycle (Georgetown, Tex.) [Cell Cycle] 2018; Vol. 17 (3), pp. 348-355. Date of Electronic Publication: 2018 Feb 15.
نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, N.I.H., Intramural; Research Support, Non-U.S. Gov't
اللغة: English
بيانات الدورية: Publisher: Taylor & Francis Country of Publication: United States NLM ID: 101137841 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1551-4005 (Electronic) Linking ISSN: 15514005 NLM ISO Abbreviation: Cell Cycle Subsets: MEDLINE
أسماء مطبوعة: Publication: 2015- : Philadelphia, PA : Taylor & Francis
Original Publication: Georgetown, TX : Landes Bioscience, c2002-
مواضيع طبية MeSH: DNA-Directed DNA Polymerase/*genetics , Mutation/*genetics , Neoplasms/*enzymology , Neoplasms/*genetics, Base Sequence ; Exome/genetics ; Gene Expression Regulation, Neoplastic ; Humans ; Skin/pathology ; Skin Neoplasms/genetics ; Skin Neoplasms/pathology
مستخلص: DNA polymerase (pol) η is a specialized error-prone polymerase with at least two quite different and contrasting cellular roles: to mitigate the genetic consequences of solar UV irradiation, and promote somatic hypermutation in the variable regions of immunoglobulin genes. Misregulation and mistargeting of pol η can compromise genome integrity. We explored whether the mutational signature of pol η could be found in datasets of human somatic mutations derived from normal and cancer cells. A substantial excess of single and tandem somatic mutations within known pol η mutable motifs was noted in skin cancer as well as in many other types of human cancer, suggesting that somatic mutations in A:T bases generated by DNA polymerase η are a common feature of tumorigenesis. Another peculiarity of pol ηmutational signatures, mutations in YCG motifs, led us to speculate that error-prone DNA synthesis opposite methylated CpG dinucleotides by misregulated pol η in tumors might constitute an additional mechanism of cytosine demethylation in this hypermutable dinucleotide.
References: Cell. 2017 Jul 27;170(3):534-547.e23. (PMID: 28753428)
Science. 2015 May 22;348(6237):880-6. (PMID: 25999502)
Nat Immunol. 2001 Jun;2(6):530-6. (PMID: 11376340)
Cell. 2014 Dec 18;159(7):1524-37. (PMID: 25483777)
Hum Genet. 2015 Aug;134(8):851-64. (PMID: 26001532)
Nature. 2013 Feb 21;494(7437):366-70. (PMID: 23389445)
Nat Immunol. 2001 Jun;2(6):537-41. (PMID: 11376341)
Brief Bioinform. 2017 May 11;:null. (PMID: 28498882)
J Biol Chem. 2003 Mar 21;278(12):10314-21. (PMID: 12525487)
Front Genet. 2012 Sep 06;3:174. (PMID: 22973298)
Cancer Res. 2016 Apr 15;76(8):2057-9. (PMID: 27197248)
Curr Opin Genet Dev. 1995 Jun;5(3):382-95. (PMID: 7549435)
Proc Natl Acad Sci U S A. 2001 Jul 17;98 (15):8355-60. (PMID: 11459975)
Curr Opin Oncol. 2015 Jan;27(1):71-7. (PMID: 25402978)
Proc Natl Acad Sci U S A. 2015 Mar 10;112(10 ):E1116-25. (PMID: 25713363)
Nucleic Acids Res. 2016 Mar 18;44(5):2075-84. (PMID: 26883632)
J Exp Med. 2016 Aug 22;213(9):1675-83. (PMID: 27455952)
Proc Natl Acad Sci U S A. 2010 Jan 19;107(3):961-8. (PMID: 20080596)
Proc Natl Acad Sci U S A. 2009 Oct 6;106(40):17101-4. (PMID: 19805137)
Nature. 2012 Jul 18;487(7407):330-7. (PMID: 22810696)
J Mol Biol. 2001 Sep 14;312(2):335-46. (PMID: 11554790)
Sci Rep. 2016 Dec 07;6:38133. (PMID: 27924834)
Nature. 2000 Apr 27;404(6781):1011-3. (PMID: 10801132)
DNA Repair (Amst). 2016 Feb;38:110-6. (PMID: 26719140)
DNA Repair (Amst). 2017 Aug;56:16-25. (PMID: 28687338)
Nature. 2011 Jun 29;474(7353):609-15. (PMID: 21720365)
J Exp Med. 2012 Jun 4;209(6):1075-81. (PMID: 22615128)
Mutat Res. 2001 Jul 1;478(1-2):129-39. (PMID: 11406177)
Nucleic Acids Res. 2017 Jul 3;45(W1):W514-W522. (PMID: 28472504)
J Immunol. 2005 Jun 15;174(12):7781-6. (PMID: 15944281)
J Pathol Transl Med. 2015 Jan;49(1):13-22. (PMID: 25812653)
Leukemia. 2004 Apr;18(4):756-62. (PMID: 14961036)
Nat Rev Genet. 2013 Oct;14(10):703-18. (PMID: 24022702)
Nat Commun. 2014 Nov 25;5:5437. (PMID: 25421715)
Science. 1999 Jul 9;285(5425):263-5. (PMID: 10398605)
Nature. 2013 Aug 22;500(7463):415-21. (PMID: 23945592)
Breast Cancer Res. 2000;2(5):324-30. (PMID: 11250724)
Nature. 2015 Feb 26;518(7540):495-501. (PMID: 25719666)
Nature. 2004 Mar 4;428(6978):97-100. (PMID: 14999287)
PLoS Genet. 2016 Oct 27;12 (10 ):e1006385. (PMID: 27788131)
Cancer Res. 1974 Sep;34(9):2311-21. (PMID: 4136142)
J Biol Chem. 2001 Jan 26;276(4):2317-20. (PMID: 11113111)
Nat Genet. 2015 Sep;47(9):1067-72. (PMID: 26258849)
Oncotarget. 2014 Mar 15;5(5):1118-31. (PMID: 24851241)
Proc Natl Acad Sci U S A. 2002 Jul 23;99(15):9954-9. (PMID: 12119399)
Nature. 1999 Jun 17;399(6737):700-4. (PMID: 10385124)
Carcinogenesis. 2016 Jun;37(6):531-40. (PMID: 27207657)
Curr Opin Genet Dev. 2014 Feb;24:107-13. (PMID: 24583393)
Nat Rev Cancer. 2014 Dec;14 (12 ):786-800. (PMID: 25568919)
Nat Genet. 2013 Sep;45(9):970-6. (PMID: 23852170)
PLoS Genet. 2015 May 05;11(5):e1005217. (PMID: 25941824)
Curr Opin Genet Dev. 2014 Feb;24:52-60. (PMID: 24657537)
Int Rev Cytol. 2006;255:41-132. (PMID: 17178465)
Elife. 2014 Sep 19;3:e03553. (PMID: 25237741)
Nucleic Acids Res. 2017 Feb 17;45(3):1270-1280. (PMID: 28180309)
معلومات مُعتمدة: P30 CA072720 United States CA NCI NIH HHS
فهرسة مساهمة: Keywords: DNA lesion bypass; Hypermutation; POLH; gene expression profiles; mutable motif; skin cancer; sloppy DNA polymerase
المشرفين على المادة: EC 2.7.7.7 (DNA-Directed DNA Polymerase)
EC 2.7.7.7 (Rad30 protein)
تواريخ الأحداث: Date Created: 20171116 Date Completed: 20190906 Latest Revision: 20201214
رمز التحديث: 20231215
مُعرف محوري في PubMed: PMC5914734
DOI: 10.1080/15384101.2017.1404208
PMID: 29139326
قاعدة البيانات: MEDLINE
الوصف
تدمد:1551-4005
DOI:10.1080/15384101.2017.1404208