دورية أكاديمية
DNA polymerase η mutational signatures are found in a variety of different types of cancer.
العنوان: | DNA polymerase η mutational signatures are found in a variety of different types of cancer. |
---|---|
المؤلفون: | Rogozin IB; a National Center for Biotechnology Information, National Library of Medicine , National Institutes of Health , Bethesda , MD , USA., Goncearenco A; a National Center for Biotechnology Information, National Library of Medicine , National Institutes of Health , Bethesda , MD , USA., Lada AG; b Department Microbiology and Molecular Genetics , University of California , Davis , CA , USA., De S; c Rutgers Cancer Institute of New Jersey , Rutgers University , New Brunswick , NJ , USA., Yurchenko V; d Life Science Research Center , University of Ostrava, 71000 Ostrava , Czech Republic., Nudelman G; e Systems Biology Center , Icahn School of Medicine at Mount Sinai , New York , New York 10029 , USA., Panchenko AR; a National Center for Biotechnology Information, National Library of Medicine , National Institutes of Health , Bethesda , MD , USA., Cooper DN; f Institute of Medical Genetics, School of Medicine , Cardiff University , UK., Pavlov YI; g Eppley Institute for Research in Cancer and Allied Diseases , University of Nebraska Medical Center , Omaha , NE 68198, USA.; h Departments of Microbiology and Pathology , University of Nebraska Medical Center , Omaha , NE , USA.; i Biochemistry and Molecular Biology , University of Nebraska Medical Center , Omaha , NE , USA.; j Genetics, Cell Biology and Anatomy , University of Nebraska Medical Center , Omaha , NE , USA. |
المصدر: | Cell cycle (Georgetown, Tex.) [Cell Cycle] 2018; Vol. 17 (3), pp. 348-355. Date of Electronic Publication: 2018 Feb 15. |
نوع المنشور: | Journal Article; Research Support, N.I.H., Extramural; Research Support, N.I.H., Intramural; Research Support, Non-U.S. Gov't |
اللغة: | English |
بيانات الدورية: | Publisher: Taylor & Francis Country of Publication: United States NLM ID: 101137841 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1551-4005 (Electronic) Linking ISSN: 15514005 NLM ISO Abbreviation: Cell Cycle Subsets: MEDLINE |
أسماء مطبوعة: | Publication: 2015- : Philadelphia, PA : Taylor & Francis Original Publication: Georgetown, TX : Landes Bioscience, c2002- |
مواضيع طبية MeSH: | DNA-Directed DNA Polymerase/*genetics , Mutation/*genetics , Neoplasms/*enzymology , Neoplasms/*genetics, Base Sequence ; Exome/genetics ; Gene Expression Regulation, Neoplastic ; Humans ; Skin/pathology ; Skin Neoplasms/genetics ; Skin Neoplasms/pathology |
مستخلص: | DNA polymerase (pol) η is a specialized error-prone polymerase with at least two quite different and contrasting cellular roles: to mitigate the genetic consequences of solar UV irradiation, and promote somatic hypermutation in the variable regions of immunoglobulin genes. Misregulation and mistargeting of pol η can compromise genome integrity. We explored whether the mutational signature of pol η could be found in datasets of human somatic mutations derived from normal and cancer cells. A substantial excess of single and tandem somatic mutations within known pol η mutable motifs was noted in skin cancer as well as in many other types of human cancer, suggesting that somatic mutations in A:T bases generated by DNA polymerase η are a common feature of tumorigenesis. Another peculiarity of pol ηmutational signatures, mutations in YCG motifs, led us to speculate that error-prone DNA synthesis opposite methylated CpG dinucleotides by misregulated pol η in tumors might constitute an additional mechanism of cytosine demethylation in this hypermutable dinucleotide. |
References: | Cell. 2017 Jul 27;170(3):534-547.e23. (PMID: 28753428) Science. 2015 May 22;348(6237):880-6. (PMID: 25999502) Nat Immunol. 2001 Jun;2(6):530-6. (PMID: 11376340) Cell. 2014 Dec 18;159(7):1524-37. (PMID: 25483777) Hum Genet. 2015 Aug;134(8):851-64. (PMID: 26001532) Nature. 2013 Feb 21;494(7437):366-70. (PMID: 23389445) Nat Immunol. 2001 Jun;2(6):537-41. (PMID: 11376341) Brief Bioinform. 2017 May 11;:null. (PMID: 28498882) J Biol Chem. 2003 Mar 21;278(12):10314-21. (PMID: 12525487) Front Genet. 2012 Sep 06;3:174. (PMID: 22973298) Cancer Res. 2016 Apr 15;76(8):2057-9. (PMID: 27197248) Curr Opin Genet Dev. 1995 Jun;5(3):382-95. (PMID: 7549435) Proc Natl Acad Sci U S A. 2001 Jul 17;98 (15):8355-60. (PMID: 11459975) Curr Opin Oncol. 2015 Jan;27(1):71-7. (PMID: 25402978) Proc Natl Acad Sci U S A. 2015 Mar 10;112(10 ):E1116-25. (PMID: 25713363) Nucleic Acids Res. 2016 Mar 18;44(5):2075-84. (PMID: 26883632) J Exp Med. 2016 Aug 22;213(9):1675-83. (PMID: 27455952) Proc Natl Acad Sci U S A. 2010 Jan 19;107(3):961-8. (PMID: 20080596) Proc Natl Acad Sci U S A. 2009 Oct 6;106(40):17101-4. (PMID: 19805137) Nature. 2012 Jul 18;487(7407):330-7. (PMID: 22810696) J Mol Biol. 2001 Sep 14;312(2):335-46. (PMID: 11554790) Sci Rep. 2016 Dec 07;6:38133. (PMID: 27924834) Nature. 2000 Apr 27;404(6781):1011-3. (PMID: 10801132) DNA Repair (Amst). 2016 Feb;38:110-6. (PMID: 26719140) DNA Repair (Amst). 2017 Aug;56:16-25. (PMID: 28687338) Nature. 2011 Jun 29;474(7353):609-15. (PMID: 21720365) J Exp Med. 2012 Jun 4;209(6):1075-81. (PMID: 22615128) Mutat Res. 2001 Jul 1;478(1-2):129-39. (PMID: 11406177) Nucleic Acids Res. 2017 Jul 3;45(W1):W514-W522. (PMID: 28472504) J Immunol. 2005 Jun 15;174(12):7781-6. (PMID: 15944281) J Pathol Transl Med. 2015 Jan;49(1):13-22. (PMID: 25812653) Leukemia. 2004 Apr;18(4):756-62. (PMID: 14961036) Nat Rev Genet. 2013 Oct;14(10):703-18. (PMID: 24022702) Nat Commun. 2014 Nov 25;5:5437. (PMID: 25421715) Science. 1999 Jul 9;285(5425):263-5. (PMID: 10398605) Nature. 2013 Aug 22;500(7463):415-21. (PMID: 23945592) Breast Cancer Res. 2000;2(5):324-30. (PMID: 11250724) Nature. 2015 Feb 26;518(7540):495-501. (PMID: 25719666) Nature. 2004 Mar 4;428(6978):97-100. (PMID: 14999287) PLoS Genet. 2016 Oct 27;12 (10 ):e1006385. (PMID: 27788131) Cancer Res. 1974 Sep;34(9):2311-21. (PMID: 4136142) J Biol Chem. 2001 Jan 26;276(4):2317-20. (PMID: 11113111) Nat Genet. 2015 Sep;47(9):1067-72. (PMID: 26258849) Oncotarget. 2014 Mar 15;5(5):1118-31. (PMID: 24851241) Proc Natl Acad Sci U S A. 2002 Jul 23;99(15):9954-9. (PMID: 12119399) Nature. 1999 Jun 17;399(6737):700-4. (PMID: 10385124) Carcinogenesis. 2016 Jun;37(6):531-40. (PMID: 27207657) Curr Opin Genet Dev. 2014 Feb;24:107-13. (PMID: 24583393) Nat Rev Cancer. 2014 Dec;14 (12 ):786-800. (PMID: 25568919) Nat Genet. 2013 Sep;45(9):970-6. (PMID: 23852170) PLoS Genet. 2015 May 05;11(5):e1005217. (PMID: 25941824) Curr Opin Genet Dev. 2014 Feb;24:52-60. (PMID: 24657537) Int Rev Cytol. 2006;255:41-132. (PMID: 17178465) Elife. 2014 Sep 19;3:e03553. (PMID: 25237741) Nucleic Acids Res. 2017 Feb 17;45(3):1270-1280. (PMID: 28180309) |
معلومات مُعتمدة: | P30 CA072720 United States CA NCI NIH HHS |
فهرسة مساهمة: | Keywords: DNA lesion bypass; Hypermutation; POLH; gene expression profiles; mutable motif; skin cancer; sloppy DNA polymerase |
المشرفين على المادة: | EC 2.7.7.7 (DNA-Directed DNA Polymerase) EC 2.7.7.7 (Rad30 protein) |
تواريخ الأحداث: | Date Created: 20171116 Date Completed: 20190906 Latest Revision: 20201214 |
رمز التحديث: | 20231215 |
مُعرف محوري في PubMed: | PMC5914734 |
DOI: | 10.1080/15384101.2017.1404208 |
PMID: | 29139326 |
قاعدة البيانات: | MEDLINE |
تدمد: | 1551-4005 |
---|---|
DOI: | 10.1080/15384101.2017.1404208 |