دورية أكاديمية
أعرض في EDS

Effects of maternal nutrition on the expression of genomic imprinted genes in ovine fetuses.

التفاصيل البيبلوغرافية
العنوان: Effects of maternal nutrition on the expression of genomic imprinted genes in ovine fetuses.
المؤلفون: Duan JE; a Department of Animal Science , University of Connecticut , Storrs , CT , USA., Zhang M; a Department of Animal Science , University of Connecticut , Storrs , CT , USA.; b College of Animal Science and Technology , Guangxi University , Nanning , China., Flock K; a Department of Animal Science , University of Connecticut , Storrs , CT , USA., Seesi SA; c Department of Computer Science , University of Connecticut , Storrs , CT , USA., Mandoiu I; c Department of Computer Science , University of Connecticut , Storrs , CT , USA., Jones A; a Department of Animal Science , University of Connecticut , Storrs , CT , USA., Johnson E; a Department of Animal Science , University of Connecticut , Storrs , CT , USA., Pillai S; a Department of Animal Science , University of Connecticut , Storrs , CT , USA., Hoffman M; a Department of Animal Science , University of Connecticut , Storrs , CT , USA., McFadden K; a Department of Animal Science , University of Connecticut , Storrs , CT , USA., Jiang H; b College of Animal Science and Technology , Guangxi University , Nanning , China., Reed S; a Department of Animal Science , University of Connecticut , Storrs , CT , USA., Govoni K; a Department of Animal Science , University of Connecticut , Storrs , CT , USA., Zinn S; a Department of Animal Science , University of Connecticut , Storrs , CT , USA., Jiang Z; d School of Animal Science , Louisiana State University Agricultural Center , Baton Rouge , LA , USA., Tian XC; a Department of Animal Science , University of Connecticut , Storrs , CT , USA.
المصدر: Epigenetics [Epigenetics] 2018; Vol. 13 (8), pp. 793-807. Date of Electronic Publication: 2018 Sep 21.
نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
اللغة: English
بيانات الدورية: Publisher: Taylor & Francis Country of Publication: United States NLM ID: 101265293 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1559-2308 (Electronic) Linking ISSN: 15592294 NLM ISO Abbreviation: Epigenetics Subsets: MEDLINE
أسماء مطبوعة: Publication: 2015- : Philadelphia, PA : Taylor & Francis
Original Publication: Georgetown, Tex. : Landes Bioscience, c2006-
مواضيع طبية MeSH: Genomic Imprinting* , Maternal Nutritional Physiological Phenomena*, Fetus/*metabolism, Animals ; Diet ; Female ; Gene Expression Profiling ; Male ; Sheep ; Transcriptome
مستخلص: Genomic imprinting is an epigenetic phenomenon of differential allelic expression based on parental origin. To date, 263 imprinted genes have been identified among all investigated mammalian species. However, only 21 have been described in sheep, of which 11 are annotated in the current ovine genome. Here, we aim to i) use DNA/RNA high throughput sequencing to identify new monoallelically expressed and imprinted genes in day 135 ovine fetuses and ii) determine whether maternal diet (100%, 60%, or 140% of National Research Council Total Digestible Nutrients) influences expression of imprinted genes. We also reported strategies to solve technical challenges in the data analysis pipeline. We identified 80 monoallelically expressed, 13 new putative imprinted genes, and five known imprinted genes in sheep using the 263 genes stated above as a guide. Sanger sequencing confirmed allelic expression of seven genes, CASD1, COPG2, DIRAS3, INPP5F, PLAGL1, PPP1R9A, and SLC22A18. Among the 13 putative imprinted genes, five were localized in the known sheep imprinting domains of MEST on chromosome 4, DLK1/GTL2 on chromosome 18 and KCNQ1 on chromosome 21, and three were in a novel sheep imprinted cluster on chromosome 4, known in other species as PEG10/SGCE. The expression of DIRAS3, IGF2, PHLDA2, and SLC22A18 was altered by maternal diet, albeit without allelic expression reversal. Together, our results expanded the list of sheep imprinted genes to 34 and demonstrated that while the expression levels of four imprinted genes were changed by maternal diet, the allelic expression patterns were un-changed for all imprinted genes studied.
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معلومات مُعتمدة: T32 HD007186 United States HD NICHD NIH HHS
فهرسة مساهمة: Keywords: Genomic imprinting; allelic-specific gene expression; maternal nutrition; ovine
تواريخ الأحداث: Date Created: 20180728 Date Completed: 20190306 Latest Revision: 20231004
رمز التحديث: 20240628
مُعرف محوري في PubMed: PMC6224220
DOI: 10.1080/15592294.2018.1503489
PMID: 30051747
قاعدة البيانات: MEDLINE
الوصف
تدمد:1559-2308
DOI:10.1080/15592294.2018.1503489