دورية أكاديمية

Immunometabolic Signatures Predict Risk of Progression to Active Tuberculosis and Disease Outcome.

التفاصيل البيبلوغرافية
العنوان: Immunometabolic Signatures Predict Risk of Progression to Active Tuberculosis and Disease Outcome.
المؤلفون: Duffy FJ; Center for Global Infectious Disease Research, Seattle Childrens Research Institute, Seattle, WA, United States., Weiner J 3rd; Max Planck Institute for Infection Biology, Berlin, Germany., Hansen S; Oregon Health and Science University, Portland, OR, United States., Tabb DL; Division of Molecular Biology and Human Genetics, Department of Biomedical Sciences, SAMRC-SHIP South African Tuberculosis Bioinformatics Initiative (SATBBI), Center for Bioinformatics and Computational Biology, DST/NRF Centre of Excellence for Biomedical Tuberculosis Research, South African Medical Research Council Centre for Tuberculosis Research, Stellenbosch University, Stellenbosch, South Africa., Suliman S; Department of Pathology, South African Tuberculosis Vaccine Initiative, Institute of Infectious Disease and Molecular Medicine & Division of Immunology, University of Cape Town, Cape Town, South Africa., Thompson E; Center for Infectious Disease Research, Seattle, WA, United States., Maertzdorf J; Max Planck Institute for Infection Biology, Berlin, Germany., Shankar S; Center for Infectious Disease Research, Seattle, WA, United States., Tromp G; Division of Molecular Biology and Human Genetics, Department of Biomedical Sciences, SAMRC-SHIP South African Tuberculosis Bioinformatics Initiative (SATBBI), Center for Bioinformatics and Computational Biology, DST/NRF Centre of Excellence for Biomedical Tuberculosis Research, South African Medical Research Council Centre for Tuberculosis Research, Stellenbosch University, Stellenbosch, South Africa., Parida S; Max Planck Institute for Infection Biology, Berlin, Germany.; Translational Medicine & Global Health Consulting, Berlin, Germany., Dover D; Center for Global Infectious Disease Research, Seattle Childrens Research Institute, Seattle, WA, United States., Axthelm MK; Oregon Health and Science University, Portland, OR, United States., Sutherland JS; Vaccines & Immunity Theme, Medical Research Council Unit, Fajara, Gambia., Dockrell HM; Department of Immunology and Infection, London School of Hygiene and Tropical Medicine, London, United Kingdom., Ottenhoff THM; Department of Infectious Diseases, Leiden University Medical Center, Leiden, Netherlands., Scriba TJ; Department of Pathology, South African Tuberculosis Vaccine Initiative, Institute of Infectious Disease and Molecular Medicine & Division of Immunology, University of Cape Town, Cape Town, South Africa., Picker LJ; Oregon Health and Science University, Portland, OR, United States., Walzl G; Division of Molecular Biology and Human Genetics, Department of Biomedical Sciences, SAMRC-SHIP South African Tuberculosis Bioinformatics Initiative (SATBBI), Center for Bioinformatics and Computational Biology, DST/NRF Centre of Excellence for Biomedical Tuberculosis Research, South African Medical Research Council Centre for Tuberculosis Research, Stellenbosch University, Stellenbosch, South Africa., Kaufmann SHE; Max Planck Institute for Infection Biology, Berlin, Germany., Zak DE; Center for Infectious Disease Research, Seattle, WA, United States.
مؤلفون مشاركون: GC6-74 Consortium
المصدر: Frontiers in immunology [Front Immunol] 2019 Mar 22; Vol. 10, pp. 527. Date of Electronic Publication: 2019 Mar 22 (Print Publication: 2019).
نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
اللغة: English
بيانات الدورية: Publisher: Frontiers Research Foundation] Country of Publication: Switzerland NLM ID: 101560960 Publication Model: eCollection Cited Medium: Internet ISSN: 1664-3224 (Electronic) Linking ISSN: 16643224 NLM ISO Abbreviation: Front Immunol Subsets: MEDLINE
أسماء مطبوعة: Original Publication: [Lausanne : Frontiers Research Foundation]
مواضيع طبية MeSH: Tuberculosis*/genetics , Tuberculosis*/immunology , Tuberculosis*/metabolism, Adolescent ; Adult ; Africa ; Animals ; Biomarkers ; Disease Progression ; Female ; Humans ; Macaca mulatta ; Male ; Metabolome ; Mycobacterium tuberculosis ; Transcriptome ; Tuberculosis Vaccines ; Young Adult
مستخلص: There remains a pressing need for biomarkers that can predict who will progress to active tuberculosis (TB) after exposure to Mycobacterium tuberculosis (MTB) bacterium. By analyzing cohorts of household contacts of TB index cases (HHCs) and a stringent non-human primate (NHP) challenge model, we evaluated whether integration of blood transcriptional profiling with serum metabolomic profiling can provide new understanding of disease processes and enable improved prediction of TB progression. Compared to either alone, the combined application of pre-existing transcriptome- and metabolome-based signatures more accurately predicted TB progression in the HHC cohorts and more accurately predicted disease severity in the NHPs. Pathway and data-driven correlation analyses of the integrated transcriptional and metabolomic datasets further identified novel immunometabolomic signatures significantly associated with TB progression in HHCs and NHPs, implicating cortisol, tryptophan, glutathione, and tRNA acylation networks. These results demonstrate the power of multi-omics analysis to provide new insights into complex disease processes.
References: J Exp Med. 2001 Nov 19;194(10):1421-32. (PMID: 11714749)
Proc Natl Acad Sci U S A. 2003 Sep 2;100(18):10320-5. (PMID: 12917487)
Lancet. 2004 Jan 17;363(9404):212-4. (PMID: 14738796)
J Infect Dis. 2004 Jun 1;189(11):2129-38. (PMID: 15143482)
J Biol Chem. 2005 Mar 18;280(11):9769-72. (PMID: 15632201)
J Immunol. 2005 Mar 15;174(6):3551-61. (PMID: 15749892)
J Exp Med. 1971 Sep 1;134(3 Pt 1):713-40. (PMID: 15776571)
Semin Pediatr Infect Dis. 2005 Apr;16(2):93-104. (PMID: 15825140)
Infect Immun. 2007 Jun;75(6):2668-78. (PMID: 17353284)
Cancer Cell Int. 2007 Mar 28;7:3. (PMID: 17391526)
J Infect Dis. 2007 Aug 15;196 Suppl 1:S76-85. (PMID: 17624829)
Nat Protoc. 2009;4(8):1184-91. (PMID: 19617889)
Anal Chem. 2009 Aug 15;81(16):6656-67. (PMID: 19624122)
Lancet Infect Dis. 2009 Dec;9(12):737-46. (PMID: 19926034)
Bioinformatics. 2010 Apr 1;26(7):873-81. (PMID: 20147302)
Nature. 2010 Aug 19;466(7309):973-7. (PMID: 20725040)
Genes Immun. 2011 Jan;12(1):15-22. (PMID: 20861863)
J Cheminform. 2010 Oct 18;2(1):9. (PMID: 20955607)
BMC Bioinformatics. 2011 Mar 17;12:77. (PMID: 21414208)
Front Microbiol. 2011 May 13;2:105. (PMID: 21734908)
PLoS One. 2011;6(10):e26938. (PMID: 22046420)
Clin Infect Dis. 2012 Mar;54(6):784-91. (PMID: 22267721)
PLoS Pathog. 2012 Feb;8(2):e1002464. (PMID: 22363214)
Proc Natl Acad Sci U S A. 2012 May 15;109(20):7853-8. (PMID: 22547807)
PLoS One. 2012;7(7):e40221. (PMID: 22844400)
Cell. 2012 Aug 17;150(4):803-15. (PMID: 22901810)
Eur Respir J. 2013 Jan;41(1):140-56. (PMID: 22936710)
PLoS One. 2012;7(9):e45839. (PMID: 23029268)
J Biol Chem. 2013 Mar 8;288(10):6788-800. (PMID: 23306194)
Am J Respir Crit Care Med. 2013 May 1;187(9):1007-15. (PMID: 23306539)
BMC Genomics. 2013 Feb 01;14:74. (PMID: 23375113)
PLoS One. 2013 Jun 14;8(6):e64748. (PMID: 23798993)
Nature. 2013 Jul 11;499(7457):178-83. (PMID: 23823726)
PLoS One. 2013 Aug 05;8(8):e70630. (PMID: 23940611)
PLoS Med. 2013 Oct;10(10):e1001538. (PMID: 24167453)
Nucleic Acids Res. 2014 Jan;42(Database issue):D199-205. (PMID: 24214961)
Am J Respir Crit Care Med. 2014 Apr 1;189(7):845-52. (PMID: 24559425)
N Engl J Med. 2014 May 01;370(18):1712-1723. (PMID: 24785206)
PLoS One. 2014 Oct 15;9(10):e108854. (PMID: 25329995)
J Infect Dis. 2015 May 15;211(10):1658-76. (PMID: 25398459)
Trends Immunol. 2015 Jan;36(1):21-9. (PMID: 25592035)
Immunol Rev. 2015 Mar;264(1):121-37. (PMID: 25703556)
Sci Transl Med. 2015 Feb 25;7(276):276fs8. (PMID: 25717094)
PLoS Genet. 2015 Jun 18;11(6):e1005274. (PMID: 26086077)
Nat Rev Drug Discov. 2015 Aug;14(8):511-2. (PMID: 26184493)
MBio. 2015 Sep 15;6(5):e01187-15. (PMID: 26374119)
Nucleic Acids Res. 2016 Jan 4;44(D1):D463-70. (PMID: 26467476)
Front Genet. 2015 Nov 20;6:334. (PMID: 26635870)
J Biol Chem. 2016 Feb 5;291(6):2888-903. (PMID: 26637353)
Lancet. 2016 Jun 4;387(10035):2312-2322. (PMID: 27017310)
Nat Med. 2016 May;22(5):531-8. (PMID: 27043495)
Nat Commun. 2016 Apr 12;7:11290. (PMID: 27068708)
PLoS Negl Trop Dis. 2016 May 18;10(5):e0004701. (PMID: 27192147)
Nat Rev Immunol. 2016 Sep;16(9):553-65. (PMID: 27396447)
PLoS Med. 2016 Oct 25;13(10):e1002152. (PMID: 27780211)
Lancet. 2016 Nov 5;388(10057):2233. (PMID: 27825497)
Lancet. 2016 Nov 5;388(10057):2233-2234. (PMID: 27825498)
Front Immunol. 2017 Mar 29;8:378. (PMID: 28400772)
Clin Infect Dis. 2017 Sep 15;65(6):900-909. (PMID: 28531276)
Nat Rev Immunol. 2017 Nov;17(11):691-702. (PMID: 28736436)
Perspect Clin Res. 2017 Jul-Sep;8(3):132-136. (PMID: 28828308)
Nat Rev Drug Discov. 2018 Jan;17(1):35-56. (PMID: 28935918)
Science. 2017 Nov 10;358(6364):807-813. (PMID: 29074583)
PLoS Pathog. 2017 Nov 16;13(11):e1006687. (PMID: 29145483)
Nat Med. 2018 Feb;24(2):130-143. (PMID: 29334373)
Am J Respir Crit Care Med. 2018 Apr 6;:. (PMID: 29624071)
Front Immunol. 2018 Apr 13;9:661. (PMID: 29706954)
Nat Commun. 2018 Dec 6;9(1):5208. (PMID: 30523338)
معلومات مُعتمدة: P51 OD011092 United States OD NIH HHS; MC_UP_A900_1122 United Kingdom MRC_ Medical Research Council; U19 AI135976 United States AI NIAID NIH HHS; U19 AI106761 United States AI NIAID NIH HHS; P41 GM109824 United States GM NIGMS NIH HHS; MC_U190071468 United Kingdom MRC_ Medical Research Council
فهرسة مساهمة: Investigator: SHE Kaufmann; SK Parida; R Golinski; J Maertzdorf; J Weiner; M Jacobson; G McEwen; G Walzl; GF Black; G van der Spuy; K Stanley; M Kriel; N Du Plessis; N Nene; AG Loxton; NN Chegou; S Suliman; T Scriba; M Fisher; H Mahomed; J Hughes; K Downing; A Penn-Nicholson; H Mulenga; B Abel; M Bowmaker; B Kagina; W Kwong; CW Hanekom; THM Ottenhoff; MR Klein; MC Haks; KL Franken; A Geluk; KE van Meijgaarden; SA Joosten; D van Baarle; F Miedema; WH Boom; B Thiel; J Sadoff; D Sizemore; S Ramachandran; L Barker; M Brennan; F Weichold; S Muller; L Geiter; G Schoolnik; G Dolganov; T Van; H Mayanja-Kizza; M Joloba; S Zalwango; M Nsereko; B Okwera; H Kisingo; HM Dockrell; S Smith; P Gorak-Stolinska; YG Hur; M Lalor; JS Lee; AC Crampin; N French; B Ngwira; AB Smith; K Watkins; L Ambrose; F Simukonda; H Mvula; F Chilongo; J Saul; K Branson; D Kassa; A Abebe; T Mesele; B Tegbaru; R Howe; A Mihret; A Aseffa; Y Bekele; R Iwnetu; M Tafesse; L Yamuah; M Ota; J Sutherland; P Hill; R Adegbola; T Corrah; M Antonio; T Togun; I Adetifa; S Donkor; P Andersen; I Rosenkrands; M Doherty; K Weldingh
Keywords: biomarker; host-pathogen interaction; household contact; inflammation; metabolomics; rhesus macaque; transcriptomics; tuberculosis
المشرفين على المادة: 0 (Biomarkers)
0 (Tuberculosis Vaccines)
تواريخ الأحداث: Date Created: 20190411 Date Completed: 20200824 Latest Revision: 20210109
رمز التحديث: 20231215
مُعرف محوري في PubMed: PMC6440524
DOI: 10.3389/fimmu.2019.00527
PMID: 30967866
قاعدة البيانات: MEDLINE
الوصف
تدمد:1664-3224
DOI:10.3389/fimmu.2019.00527