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Physiology, Metabolism, and Fossilization of Hot-Spring Filamentous Microbial Mats.

التفاصيل البيبلوغرافية
العنوان: Physiology, Metabolism, and Fossilization of Hot-Spring Filamentous Microbial Mats.
المؤلفون: Dong Y; Carl R. Woese Institute for Genomic Biology, University of Illinois Urbana-Champaign, Urbana, Illinois, USA.; School of Environmental Studies, China University of Geosciences, Wuhan, China., Sanford RA; Carl R. Woese Institute for Genomic Biology, University of Illinois Urbana-Champaign, Urbana, Illinois, USA.; Department of Geology, University of Illinois Urbana-Champaign, Urbana, Illinois, USA., Inskeep WP; Department of Land Resources and Environmental Sciences, Montana State University, Bozeman, Montana, USA.; Thermal Biology Institute, Montana State University, Bozeman, Montana, USA., Srivastava V; Division of Glycoscience, School of Biotechnology, Royal Institute of Technology (KTH), Stockholm, Sweden., Bulone V; Division of Glycoscience, School of Biotechnology, Royal Institute of Technology (KTH), Stockholm, Sweden.; Division School of Agriculture, Food and Wine, University of Adelaide, Adelaide, Australia., Fields CJ; Roy J. Carver Biotechnology Center, University of Illinois Urbana-Champaign, Urbana, Illinois, USA., Yau PM; Roy J. Carver Biotechnology Center, University of Illinois Urbana-Champaign, Urbana, Illinois, USA., Sivaguru M; Carl R. Woese Institute for Genomic Biology, University of Illinois Urbana-Champaign, Urbana, Illinois, USA.; Carl Zeiss Labs @ Location Partner, Carl R. Woese Institute for Genomic Biology University of Illinois at Urbana-Champaign, Urbana, Illinois, USA., Ahrén D; Microbial Ecology Group, Bioinformatics Infrastructure for Life Sciences, Department of Biology, Lund University, Lund, Sweden.; Pufendorf Institute for Advanced Sciences, Lund University, Lund, Sweden., Fouke KW; Carl R. Woese Institute for Genomic Biology, University of Illinois Urbana-Champaign, Urbana, Illinois, USA.; Department of Geology and Environmental Sciences, Bucknell University, Lewisburg, Pennsylvania, USA., Weber J; Carl R. Woese Institute for Genomic Biology, University of Illinois Urbana-Champaign, Urbana, Illinois, USA., Werth CR; Carl R. Woese Institute for Genomic Biology, University of Illinois Urbana-Champaign, Urbana, Illinois, USA.; Department of Civil, Architectural and Environmental Engineering, University of Texas Austin, Texas, USA., Cann IK; Carl R. Woese Institute for Genomic Biology, University of Illinois Urbana-Champaign, Urbana, Illinois, USA.; Department of Animal Sciences, University of Illinois Urbana-Champaign, Urbana, Illinois, USA.; Department of Microbiology, University of Illinois Urbana-Champaign, Urbana, Illinois, USA., Keating KM; Roy J. Carver Biotechnology Center, University of Illinois Urbana-Champaign, Urbana, Illinois, USA., Khetani RS; Roy J. Carver Biotechnology Center, University of Illinois Urbana-Champaign, Urbana, Illinois, USA., Hernandez AG; Roy J. Carver Biotechnology Center, University of Illinois Urbana-Champaign, Urbana, Illinois, USA., Wright C; Roy J. Carver Biotechnology Center, University of Illinois Urbana-Champaign, Urbana, Illinois, USA., Band M; Roy J. Carver Biotechnology Center, University of Illinois Urbana-Champaign, Urbana, Illinois, USA., Imai BS; Roy J. Carver Biotechnology Center, University of Illinois Urbana-Champaign, Urbana, Illinois, USA., Fried GA; Carl R. Woese Institute for Genomic Biology, University of Illinois Urbana-Champaign, Urbana, Illinois, USA.; Carl Zeiss Labs @ Location Partner, Carl R. Woese Institute for Genomic Biology University of Illinois at Urbana-Champaign, Urbana, Illinois, USA., Fouke BW; Carl R. Woese Institute for Genomic Biology, University of Illinois Urbana-Champaign, Urbana, Illinois, USA.; Department of Geology, University of Illinois Urbana-Champaign, Urbana, Illinois, USA.; Thermal Biology Institute, Montana State University, Bozeman, Montana, USA.; Roy J. Carver Biotechnology Center, University of Illinois Urbana-Champaign, Urbana, Illinois, USA.; Carl Zeiss Labs @ Location Partner, Carl R. Woese Institute for Genomic Biology University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.; Pufendorf Institute for Advanced Sciences, Lund University, Lund, Sweden.; Department of Microbiology, University of Illinois Urbana-Champaign, Urbana, Illinois, USA.
المصدر: Astrobiology [Astrobiology] 2019 Dec; Vol. 19 (12), pp. 1442-1458. Date of Electronic Publication: 2019 Apr 30.
نوع المنشور: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.
اللغة: English
بيانات الدورية: Publisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 101088083 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1557-8070 (Electronic) Linking ISSN: 15578070 NLM ISO Abbreviation: Astrobiology Subsets: MEDLINE
أسماء مطبوعة: Original Publication: Larchmont, N.Y. : Mary Ann Liebert, Inc., c2001-
مواضيع طبية MeSH: Biodiversity*, Extremophiles/*physiology , Hot Springs/*microbiology , Microbiota/*physiology, Bacteria/genetics ; Bacteria/isolation & purification ; Bacteria/metabolism ; Carbon Cycle ; DNA, Bacterial/isolation & purification ; Extremophiles/isolation & purification ; Fimbriae Proteins/genetics ; Fimbriae Proteins/metabolism ; Fossils/microbiology ; Gene Expression Regulation, Bacterial ; Genes, Bacterial ; Geologic Sediments/microbiology ; Oxidation-Reduction ; Phylogeny ; RNA, Ribosomal, 16S/genetics ; Sulfur/metabolism
مستخلص: The evolutionarily ancient Aquificales bacterium Sulfurihydrogenibium spp. dominates filamentous microbial mat communities in shallow, fast-flowing, and dysoxic hot-spring drainage systems around the world. In the present study, field observations of these fettuccini-like microbial mats at Mammoth Hot Springs in Yellowstone National Park are integrated with geology, geochemistry, hydrology, microscopy, and multi-omic molecular biology analyses. Strategic sampling of living filamentous mats along with the hot-spring CaCO 3 ( travertine ) in which they are actively being entombed and fossilized has permitted the first direct linkage of Sulfurihydrogenibium spp. physiology and metabolism with the formation of distinct travertine streamer microbial biomarkers. Results indicate that, during chemoautotrophy and CO 2 carbon fixation, the 87-98% Sulfurihydrogenibium -dominated mats utilize chaperons to facilitate enzyme stability and function. High-abundance transcripts and proteins for type IV pili and extracellular polymeric substances (EPSs) are consistent with their strong mucus-rich filaments tens of centimeters long that withstand hydrodynamic shear as they become encrusted by more than 5 mm of travertine per day. Their primary energy source is the oxidation of reduced sulfur ( e.g., sulfide, sulfur, or thiosulfate) and the simultaneous uptake of extremely low concentrations of dissolved O 2 facilitated by bd-type cytochromes. The formation of elevated travertine ridges permits the Sulfurihydrogenibium -dominated mats to create a shallow platform from which to access low levels of dissolved oxygen at the virtual exclusion of other microorganisms. These ridged travertine streamer microbial biomarkers are well preserved and create a robust fossil record of microbial physiological and metabolic activities in modern and ancient hot-spring ecosystems.
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فهرسة مساهمة: Keywords: Biomarkers; Filamentous microbial mats; Hot-spring; Sulfurihydrogenibium; Travertine
المشرفين على المادة: 0 (DNA, Bacterial)
0 (RNA, Ribosomal, 16S)
147680-16-8 (Fimbriae Proteins)
70FD1KFU70 (Sulfur)
SCR Organism: Sulfurihydrogenibium azorense
تواريخ الأحداث: Date Created: 20190501 Date Completed: 20200831 Latest Revision: 20231020
رمز التحديث: 20231020
مُعرف محوري في PubMed: PMC6918859
DOI: 10.1089/ast.2018.1965
PMID: 31038352
قاعدة البيانات: MEDLINE
الوصف
تدمد:1557-8070
DOI:10.1089/ast.2018.1965