دورية أكاديمية
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Genetics of Adaptation of the Ascomycetous Fungus Podospora anserina to Submerged Cultivation.

التفاصيل البيبلوغرافية
العنوان: Genetics of Adaptation of the Ascomycetous Fungus Podospora anserina to Submerged Cultivation.
المؤلفون: Kudryavtseva OA; Department of Mycology and Phycology, Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia., Safina KR; Skolkovo Institute of Science and Technology, Moscow, Russia.; Institute for Information Transmission Problems of the Russian Academy of Sciences, Moscow, Russia., Vakhrusheva OA; Skolkovo Institute of Science and Technology, Moscow, Russia.; Institute for Information Transmission Problems of the Russian Academy of Sciences, Moscow, Russia., Logacheva MD; Skolkovo Institute of Science and Technology, Moscow, Russia.; Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia., Penin AA; Institute for Information Transmission Problems of the Russian Academy of Sciences, Moscow, Russia.; Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia., Neretina TV; Institute for Information Transmission Problems of the Russian Academy of Sciences, Moscow, Russia.; Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia.; White Sea Biological Station, Lomonosov Moscow State University, Republic of Karelia, Russia., Moskalenko VN; Zoological Museum, Lomonosov Moscow State University, Moscow, Russia., Glagoleva ES; Department of Plant Physiology, Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia., Bazykin GA; Skolkovo Institute of Science and Technology, Moscow, Russia.; Institute for Information Transmission Problems of the Russian Academy of Sciences, Moscow, Russia., Kondrashov AS; Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia.; Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor.
المصدر: Genome biology and evolution [Genome Biol Evol] 2019 Oct 01; Vol. 11 (10), pp. 2807-2817.
نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't
اللغة: English
بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 101509707 Publication Model: Print Cited Medium: Internet ISSN: 1759-6653 (Electronic) Linking ISSN: 17596653 NLM ISO Abbreviation: Genome Biol Evol Subsets: MEDLINE
أسماء مطبوعة: Original Publication: Oxford, UK : Oxford University Press
مواضيع طبية MeSH: Evolution, Molecular*, Podospora/*genetics, Alleles ; Fungal Proteins/genetics ; Genetic Variation ; Genome, Fungal ; INDEL Mutation ; Mycology/methods ; Phenotype ; Podospora/growth & development
مستخلص: Podospora anserina is a model ascomycetous fungus which shows pronounced phenotypic senescence when grown on solid medium but possesses unlimited lifespan under submerged cultivation. In order to study the genetic aspects of adaptation of P. anserina to submerged cultivation, we initiated a long-term evolution experiment. In the course of the first 4 years of the experiment, 125 single-nucleotide substitutions and 23 short indels were fixed in eight independently evolving populations. Six proteins that affect fungal growth and development evolved in more than one population; in particular, in the G-protein alpha subunit FadA, new alleles fixed in seven out of eight experimental populations, and these fixations affected just four amino acid sites, which is an unprecedented level of parallelism in experimental evolution. Parallel evolution at the level of genes and pathways, an excess of nonsense and missense substitutions, and an elevated conservation of proteins and their sites where the changes occurred suggest that many of the observed fixations were adaptive and driven by positive selection.
(© The Author(s) 2019. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.)
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فهرسة مساهمة: Keywords: Podospora anserina; adaptation; experimental evolution; positive selection; submerged cultivation
المشرفين على المادة: 0 (Fungal Proteins)
تواريخ الأحداث: Date Created: 20190919 Date Completed: 20200327 Latest Revision: 20240720
رمز التحديث: 20240720
مُعرف محوري في PubMed: PMC6786475
DOI: 10.1093/gbe/evz194
PMID: 31529025
قاعدة البيانات: MEDLINE
الوصف
تدمد:1759-6653
DOI:10.1093/gbe/evz194