دورية أكاديمية
Local and Geographic Factors Shape the Occupancy-Frequency Distribution of Freshwater Bacteria.
| العنوان: | Local and Geographic Factors Shape the Occupancy-Frequency Distribution of Freshwater Bacteria. |
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| المؤلفون: | Mateus-Barros E; Department of Hydrobiology, Laboratory of Microbial Processes and Biodiversity, Federal University of São Carlos (UFSCar), São Carlos, SP, 13565-905, Brazil. erickmbarros@ufscar.br.; Post Graduate Program in Ecology and Natural Resources (PPG-ERN), UFSCar, São Carlos, SP, 13565-905, Brazil. erickmbarros@ufscar.br., de Melo ML; Department of Hydrobiology, Laboratory of Microbial Processes and Biodiversity, Federal University of São Carlos (UFSCar), São Carlos, SP, 13565-905, Brazil.; Département Des Sciences Biologiques, Université du Québec à Montréal, Montreal, Canada., Bagatini IL; Department of Botany, Laboratory of Phycology, Federal University of São Carlos (UFSCar), São Carlos, SP, 13565-905, Brazil., Caliman A; Departamento de Ecologia, Universidade Federal do Rio Grande do Norte, Natal, RN, 59078-900, Brazil., Sarmento H; Department of Hydrobiology, Laboratory of Microbial Processes and Biodiversity, Federal University of São Carlos (UFSCar), São Carlos, SP, 13565-905, Brazil. |
| المصدر: | Microbial ecology [Microb Ecol] 2021 Jan; Vol. 81 (1), pp. 26-35. Date of Electronic Publication: 2020 Jul 23. |
| نوع المنشور: | Journal Article |
| اللغة: | English |
| بيانات الدورية: | Publisher: Springer-Verlag Country of Publication: United States NLM ID: 7500663 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1432-184X (Electronic) Linking ISSN: 00953628 NLM ISO Abbreviation: Microb Ecol Subsets: MEDLINE |
| أسماء مطبوعة: | Original Publication: New York, Springer-Verlag. |
| مواضيع طبية MeSH: | Bacterial Load*, Bacteria/*growth & development , Fresh Water/*microbiology , Microbial Consortia/*physiology, Bacteria/classification ; Bacteria/genetics ; Biodiversity ; Brazil ; Demography ; Ecosystem ; Geography ; RNA, Ribosomal, 16S/genetics |
| مستخلص: | Species prevalence across the landscape is related to their local abundance, which is a result of deterministic and stochastic processes that select organisms capable of recolonizing sites where they were once extinct, a process known as the rescue effect. The occupancy-frequency distribution (OFD) describes these patterns and has been extensively used to understand organism's distribution but has been poorly tested on microorganisms. In order to test OFD on freshwater bacteria, we collected data from 60 shallow lakes distributed across a wide area in southeastern Brazil, to determine the bacterial operational taxonomic units (OTUs) that were present in all sites (core) and at only one site (satellite). Then, we analyzed the spatial abundance distributions of individual OTUs to understand the influence of local abundances on regional occupancy patterns. Finally, we tested the environmental factors that influenced occupancy and abundance. We found a significant bimodal OFD for freshwater bacteria using both OTUs (97% clustering) and amplicon sequence variants (ASVs, unique sequences), with 13 core OTUs and 1169 satellite OTUs, but only three core ASVs. Core organisms had a bimodal or gamma abundance distribution. The main driver of the core community was pH, while nutrients were key when the core community was excluded and the rest of the community (mild and satellite taxa) was considered. This study demonstrates the close relationship between local environmental conditions and the abundance and dispersion of microorganisms, which shapes their distribution across the landscape. |
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| معلومات مُعتمدة: | 2014/14139-3 São Paulo Research Foundation - FAPESP; 2011/50054-4 São Paulo Research Foundation - FAPESP; 001 Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - Brasil (CAPES); 309514/2017-7 National Council for Scientific and Technological Development - CNPq |
| فهرسة مساهمة: | Keywords: Bimodal distribution; Core and satellite organisms; Diversity patterns; Microbial metacommunity |
| المشرفين على المادة: | 0 (RNA, Ribosomal, 16S) |
| تواريخ الأحداث: | Date Created: 20200725 Date Completed: 20210716 Latest Revision: 20210716 |
| رمز التحديث: | 20221213 |
| DOI: | 10.1007/s00248-020-01560-3 |
| PMID: | 32705311 |
| قاعدة البيانات: | MEDLINE |
Find this article in full text from Springer Verlag. 
Full Text Finder | تدمد: | 1432-184X |
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| DOI: | 10.1007/s00248-020-01560-3 |