دورية أكاديمية
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Ancestral Absence of Electron Transport Chains in Patescibacteria and DPANN.

التفاصيل البيبلوغرافية
العنوان: Ancestral Absence of Electron Transport Chains in Patescibacteria and DPANN.
المؤلفون: Beam JP; Bigelow Laboratory for Ocean Sciences, East Boothbay, ME, United States., Becraft ED; Bigelow Laboratory for Ocean Sciences, East Boothbay, ME, United States., Brown JM; Bigelow Laboratory for Ocean Sciences, East Boothbay, ME, United States., Schulz F; Department of Energy Joint Genome Institute, Berkeley, CA, United States., Jarett JK; Department of Energy Joint Genome Institute, Berkeley, CA, United States., Bezuidt O; Bigelow Laboratory for Ocean Sciences, East Boothbay, ME, United States., Poulton NJ; Bigelow Laboratory for Ocean Sciences, East Boothbay, ME, United States., Clark K; Bigelow Laboratory for Ocean Sciences, East Boothbay, ME, United States., Dunfield PF; Department of Biological Sciences, University of Calgary, Calgary, AB, Canada., Ravin NV; Institute of Bioengineering, Research Center of Biotechnology of the Russian Academy of Sciences, Moscow, Russia., Spear JR; Civil and Environmental Engineering, Colorado School of Mines, Golden, CO, United States., Hedlund BP; School of Life Sciences - Nevada Institute of Personalized Medicine, University of Nevada, Las Vegas, Las Vegas, NV, United States., Kormas KA; Department of Ichthyology and Aquatic Environment, University of Thessaly, Volos, Greece., Sievert SM; Biology Department, Woods Hole Oceanographic Institution, Woods Hole, MA, United States., Elshahed MS; Department of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK, United States., Barton HA; Department of Biology, University of Akron, Akron, OH, United States., Stott MB; School of Biological Sciences, University of Canterbury, Christchurch, New Zealand., Eisen JA; Department of Evolution and Ecology, Department of Medical Microbiology and Immunology, Genome Center, University of California, Davis, Davis, CA, United States., Moser DP; Desert Research Institute, Las Vegas, NV, United States., Onstott TC; Department of Geosciences, Princeton University, Princeton, NJ, United States., Woyke T; Department of Energy Joint Genome Institute, Berkeley, CA, United States., Stepanauskas R; Bigelow Laboratory for Ocean Sciences, East Boothbay, ME, United States.
المصدر: Frontiers in microbiology [Front Microbiol] 2020 Aug 17; Vol. 11, pp. 1848. Date of Electronic Publication: 2020 Aug 17 (Print Publication: 2020).
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Frontiers Research Foundation Country of Publication: Switzerland NLM ID: 101548977 Publication Model: eCollection Cited Medium: Print ISSN: 1664-302X (Print) Linking ISSN: 1664302X NLM ISO Abbreviation: Front Microbiol Subsets: PubMed not MEDLINE
أسماء مطبوعة: Original Publication: Lausanne : Frontiers Research Foundation
مستخلص: Recent discoveries suggest that the candidate superphyla Patescibacteria and DPANN constitute a large fraction of the phylogenetic diversity of Bacteria and Archaea. Their small genomes and limited coding potential have been hypothesized to be ancestral adaptations to obligate symbiotic lifestyles. To test this hypothesis, we performed cell-cell association, genomic, and phylogenetic analyses on 4,829 individual cells of Bacteria and Archaea from 46 globally distributed surface and subsurface field samples. This confirmed the ubiquity and abundance of Patescibacteria and DPANN in subsurface environments, the small size of their genomes and cells, and the divergence of their gene content from other Bacteria and Archaea. Our analyses suggest that most Patescibacteria and DPANN in the studied subsurface environments do not form specific physical associations with other microorganisms. These data also suggest that their unusual genomic features and prevalent auxotrophies may be a result of ancestral, minimal cellular energy transduction mechanisms that lack respiration, thus relying solely on fermentation for energy conservation.
(Copyright © 2020 Beam, Becraft, Brown, Schulz, Jarett, Bezuidt, Poulton, Clark, Dunfield, Ravin, Spear, Hedlund, Kormas, Sievert, Elshahed, Barton, Stott, Eisen, Moser, Onstott, Woyke and Stepanauskas.)
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فهرسة مساهمة: Keywords: Archaea; Bacteria; evolution; genomics fermentation; oxidoreductases; respiration
تواريخ الأحداث: Date Created: 20201005 Latest Revision: 20240329
رمز التحديث: 20240329
مُعرف محوري في PubMed: PMC7507113
DOI: 10.3389/fmicb.2020.01848
PMID: 33013724
قاعدة البيانات: MEDLINE
الوصف
تدمد:1664-302X
DOI:10.3389/fmicb.2020.01848