دورية أكاديمية

High genetic diversity of ancient horses from the Ukok Plateau.

التفاصيل البيبلوغرافية
العنوان: High genetic diversity of ancient horses from the Ukok Plateau.
المؤلفون: Vorobieva NV; Department of the Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology SB RAS, Novosibirsk, Novosibirsk Oblast, Russia.; Paleogenomics Laboratory, Novosibirsk State University, Novosibirsk, Novosibirsk Oblast, Russia., Makunin AI; Department of the Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology SB RAS, Novosibirsk, Novosibirsk Oblast, Russia., Druzhkova AS; Department of the Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology SB RAS, Novosibirsk, Novosibirsk Oblast, Russia., Kusliy MA; Department of the Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology SB RAS, Novosibirsk, Novosibirsk Oblast, Russia., Trifonov VA; Department of the Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology SB RAS, Novosibirsk, Novosibirsk Oblast, Russia., Popova KO; Department of the Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology SB RAS, Novosibirsk, Novosibirsk Oblast, Russia., Polosmak NV; Paleometal Archeology Department, Institute of Archaeology and Ethnography SB RAS, Novosibirsk, Novosibirsk Oblast, Russia., Molodin VI; Paleometal Archeology Department, Institute of Archaeology and Ethnography SB RAS, Novosibirsk, Novosibirsk Oblast, Russia., Vasiliev SK; Paleometal Archeology Department, Institute of Archaeology and Ethnography SB RAS, Novosibirsk, Novosibirsk Oblast, Russia., Shunkov MV; Paleometal Archeology Department, Institute of Archaeology and Ethnography SB RAS, Novosibirsk, Novosibirsk Oblast, Russia., Graphodatsky AS; Department of the Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology SB RAS, Novosibirsk, Novosibirsk Oblast, Russia.
المصدر: PloS one [PLoS One] 2020 Nov 12; Vol. 15 (11), pp. e0241997. Date of Electronic Publication: 2020 Nov 12 (Print Publication: 2020).
نوع المنشور: Historical Article; Journal Article; Research Support, Non-U.S. Gov't
اللغة: English
بيانات الدورية: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE
أسماء مطبوعة: Original Publication: San Francisco, CA : Public Library of Science
مواضيع طبية MeSH: Animals, Domestic/*genetics , Animals, Wild/*genetics , Mitochondria/*genetics , Whole Genome Sequencing/*veterinary, Animals ; DNA, Ancient/analysis ; Evolution, Molecular ; Extinction, Biological ; Fossils/history ; Genome, Mitochondrial ; Haplotypes ; High-Throughput Nucleotide Sequencing/veterinary ; History, Ancient ; Horses ; Phylogeny ; Russia
مستخلص: A growing number of researchers studying horse domestication come to a conclusion that this process happened in multiple locations and involved multiple wild maternal lines. The most promising approach to address this problem involves mitochondrial haplotype comparison of wild and domestic horses from various locations coupled with studies of possible migration routes of the ancient shepherds. Here, we sequenced complete mitochondrial genomes of six horses from burials of the Ukok plateau (Russia, Altai Mountains) dated from 2.7 to 1.4 thousand years before present and a single late Pleistocene wild horse from the neighboring region (Denisova cave). Sequencing data indicates that the wild horse belongs to an extinct pre-domestication lineage. Integration of the domestic horse data with known Eurasian haplotypes of a similar age revealed two distinct groups: the first one widely distributed in Europe and presumably imported to Altai, and the second one specific for Altai Mountains and surrounding area.
Competing Interests: The authors have declared that no competing interests exist.
References: BMC Res Notes. 2012 Jul 02;5:337. (PMID: 22748135)
Cell. 2019 May 30;177(6):1419-1435.e31. (PMID: 31056281)
Am J Phys Anthropol. 1998 Apr;105(4):539-43. (PMID: 9584894)
Genome Res. 2010 Sep;20(9):1297-303. (PMID: 20644199)
BMC Evol Biol. 2007 Nov 08;7:214. (PMID: 17996036)
Bioinformatics. 2013 Jul 01;29(13):1682-4. (PMID: 23613487)
Anim Genet. 2009 Dec;40(6):933-44. (PMID: 19744143)
Genetics. 2002 Jul;161(3):1307-20. (PMID: 12136032)
BMC Evol Biol. 2011 Nov 14;11:328. (PMID: 22082251)
Mol Biol Evol. 2012 Jun;29(6):1695-701. (PMID: 22319168)
Mol Biol Evol. 1999 Jan;16(1):37-48. (PMID: 10331250)
Virus Evol. 2018 Jun 08;4(1):vey016. (PMID: 29942656)
Nucleic Acids Res. 2003 Jun 1;31(11):e61. (PMID: 12771225)
Science. 2001 Jan 19;291(5503):474-7. (PMID: 11161199)
Biotech Histochem. 1995 Jan;70(1):12-8. (PMID: 7540046)
Syst Biol. 2018 Sep 1;67(5):901-904. (PMID: 29718447)
Nucleic Acids Res. 2002 Jul 15;30(14):3059-66. (PMID: 12136088)
Science. 2018 Apr 06;360(6384):111-114. (PMID: 29472442)
Science. 2017 Apr 28;356(6336):442-445. (PMID: 28450643)
Nat Protoc. 2014 May;9(5):1056-82. (PMID: 24722405)
PLoS One. 2010 Nov 16;5(11):e14004. (PMID: 21103372)
Nat Genet. 2004 Apr;36(4):335-6. (PMID: 15034578)
Nature. 2013 Jul 4;499(7456):74-8. (PMID: 23803765)
Curr Biol. 2015 Oct 5;25(19):2577-83. (PMID: 26412128)
Proc Natl Acad Sci U S A. 2012 Feb 14;109(7):2449-54. (PMID: 22308342)
J Hered. 2006 Mar-Apr;97(2):107-13. (PMID: 16489143)
PLoS One. 2010 Dec 20;5(12):e15311. (PMID: 21187961)
Anim Genet. 2005 Jun;36(3):203-9. (PMID: 15932398)
المشرفين على المادة: 0 (DNA, Ancient)
تواريخ الأحداث: Date Created: 20201112 Date Completed: 20210108 Latest Revision: 20210108
رمز التحديث: 20240628
مُعرف محوري في PubMed: PMC7660532
DOI: 10.1371/journal.pone.0241997
PMID: 33180850
قاعدة البيانات: MEDLINE
الوصف
تدمد:1932-6203
DOI:10.1371/journal.pone.0241997