دورية أكاديمية
أعرض في EDS

Diversity and Adaptations of Escherichia coli Strains: Exploring the Intestinal Community in Crohn's Disease Patients and Healthy Individuals.

التفاصيل البيبلوغرافية
العنوان: Diversity and Adaptations of Escherichia coli Strains: Exploring the Intestinal Community in Crohn's Disease Patients and Healthy Individuals.
المؤلفون: Siniagina MN; Institute of Fundamental Medicine and Biology, Kazan Federal University, 420008 Kazan, Russia., Markelova MI; Institute of Fundamental Medicine and Biology, Kazan Federal University, 420008 Kazan, Russia., Boulygina EA; Institute of Fundamental Medicine and Biology, Kazan Federal University, 420008 Kazan, Russia., Laikov AV; Institute of Fundamental Medicine and Biology, Kazan Federal University, 420008 Kazan, Russia., Khusnutdinova DR; Institute of Fundamental Medicine and Biology, Kazan Federal University, 420008 Kazan, Russia., Abdulkhakov SR; Institute of Fundamental Medicine and Biology, Kazan Federal University, 420008 Kazan, Russia.; Department of Outpatient Therapy and General Medical Practice, Kazan State Medical University, 420012 Kazan, Russia., Danilova NA; Department of Gastroenterology, Republican Clinical Hospital of Tatarstan Republic, 420064 Kazan, Russia., Odintsova AH; Department of Gastroenterology, Republican Clinical Hospital of Tatarstan Republic, 420064 Kazan, Russia., Abdulkhakov RA; Department of Hospital Medicine, Kazan State Medical University, 420012 Kazan, Russia., Grigoryeva TV; Institute of Fundamental Medicine and Biology, Kazan Federal University, 420008 Kazan, Russia.
المصدر: Microorganisms [Microorganisms] 2021 Jun 15; Vol. 9 (6). Date of Electronic Publication: 2021 Jun 15.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: MDPI AG Country of Publication: Switzerland NLM ID: 101625893 Publication Model: Electronic Cited Medium: Print ISSN: 2076-2607 (Print) Linking ISSN: 20762607 NLM ISO Abbreviation: Microorganisms Subsets: PubMed not MEDLINE
أسماء مطبوعة: Original Publication: Basel, Switzerland : MDPI AG, [2013]-
مستخلص: Crohn's disease (CD) is characterized by a chronic, progressive inflammation across the gastrointestinal tract with a series of exacerbations and remissions. A significant factor in the CD pathogenesis is an imbalance in gut microbiota composition, particularly the prevalence of Escherichia coli . In the present study, the genomes of sixty-three E. coli strains from the gut of patients with CD and healthy subjects were sequenced. In addition, eighteen E. coli -like metagenome-assembled genomes (MAGs) were reconstructed from the shotgun-metagenome sequencing data of fecal samples. The comparative analysis revealed the similarity of E. coli genomes regardless of the origin of the strain. The strains exhibited similar genetic patterns of virulence, antibiotic resistance, and bacteriocin-producing systems. The study showed antagonistic activity of E. coli strains and the metabolic features needed for their successful competition in the human gut environment. These observations suggest complex bacterial interactions within the gut which may affect the host and cause intestinal damage.
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معلومات مُعتمدة: 17-00-00433 Russian Foundation for Basic Research; 0671-2020-0058 Ministry of Education and Science of the Russian Federation
فهرسة مساهمة: Keywords: Crohn’s disease; Escherichia coli; shotgun metagenome sequencing; whole-genome sequencing
تواريخ الأحداث: Date Created: 20210702 Latest Revision: 20210714
رمز التحديث: 20231215
مُعرف محوري في PubMed: PMC8232093
DOI: 10.3390/microorganisms9061299
PMID: 34203637
قاعدة البيانات: MEDLINE
الوصف
تدمد:2076-2607
DOI:10.3390/microorganisms9061299