دورية أكاديمية

The tandem repeat modules of Xist lncRNA: a swiss army knife for the control of X-chromosome inactivation.

التفاصيل البيبلوغرافية
العنوان: The tandem repeat modules of Xist lncRNA: a swiss army knife for the control of X-chromosome inactivation.
المؤلفون: Raposo AC; Departamento de Bioengenharia e Instituto de Bioengenharia e Biociências, Instituto Superior Técnico, Universidade de Lisboa, Lisbon, Portugal.; Associate Laboratory i4HB - Institute for Health and Bioeconomy, Instituto Superior Técnico, Universidade de Lisboa, Lisbon, Portugal.; Instituto de Medicina Molecular João Lobo Antunes, Faculdade de Medicina, Universidade de Lisboa, Lisbon, Portugal., Casanova M; Departamento de Bioengenharia e Instituto de Bioengenharia e Biociências, Instituto Superior Técnico, Universidade de Lisboa, Lisbon, Portugal.; Associate Laboratory i4HB - Institute for Health and Bioeconomy, Instituto Superior Técnico, Universidade de Lisboa, Lisbon, Portugal.; Instituto de Medicina Molecular João Lobo Antunes, Faculdade de Medicina, Universidade de Lisboa, Lisbon, Portugal., Gendrel AV; Instituto de Medicina Molecular João Lobo Antunes, Faculdade de Medicina, Universidade de Lisboa, Lisbon, Portugal., da Rocha ST; Departamento de Bioengenharia e Instituto de Bioengenharia e Biociências, Instituto Superior Técnico, Universidade de Lisboa, Lisbon, Portugal.; Associate Laboratory i4HB - Institute for Health and Bioeconomy, Instituto Superior Técnico, Universidade de Lisboa, Lisbon, Portugal.; Instituto de Medicina Molecular João Lobo Antunes, Faculdade de Medicina, Universidade de Lisboa, Lisbon, Portugal.
المصدر: Biochemical Society transactions [Biochem Soc Trans] 2021 Dec 17; Vol. 49 (6), pp. 2549-2560.
نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't; Review
اللغة: English
بيانات الدورية: Publisher: Portland Press On The Behalf Of The Biochemical Society Country of Publication: England NLM ID: 7506897 Publication Model: Print Cited Medium: Internet ISSN: 1470-8752 (Electronic) Linking ISSN: 03005127 NLM ISO Abbreviation: Biochem Soc Trans Subsets: MEDLINE
أسماء مطبوعة: Original Publication: London : Portland Press On The Behalf Of The Biochemical Society
مواضيع طبية MeSH: Tandem Repeat Sequences*, RNA, Long Noncoding/*genetics, Animals ; Gene Silencing ; Humans ; Mice ; Polycomb-Group Proteins/metabolism ; Transcription, Genetic ; X Chromosome Inactivation
مستخلص: X-inactive-specific transcript (Xist) is a long non-coding RNA (lncRNA) essential for X-chromosome inactivation (XCI) in female placental mammals. Thirty years after its discovery, it is still puzzling how this lncRNA triggers major structural and transcriptional changes leading to the stable silencing of an entire chromosome. Recently, a series of studies in mouse cells have uncovered domains of functional specialization within Xist mapping to conserved tandem repeat regions, known as Repeats A-to-F. These functional domains interact with various RNA binding proteins (RBPs) and fold into distinct RNA structures to execute specific tasks in a synergistic and coordinated manner during the inactivation process. This modular organization of Xist is mostly conserved in humans, but recent data point towards differences regarding functional specialization of the tandem repeats between the two species. In this review, we summarize the recent progress on understanding the role of Xist repetitive blocks and their involvement in the molecular mechanisms underlying XCI. We also discuss these findings in the light of the similarities and differences between mouse and human Xist.
(© 2021 The Author(s).)
References: Nat Genet. 1999 Aug;22(4):323-4. (PMID: 10431231)
Nature. 1996 Jan 11;379(6561):131-7. (PMID: 8538762)
Dev Cell. 2020 Jul 6;54(1):21-32.e5. (PMID: 32531209)
Nat Commun. 2019 Jul 16;10(1):3129. (PMID: 31311937)
Wellcome Open Res. 2020 Feb 17;5:31. (PMID: 32258426)
Nucleic Acids Res. 2019 May 7;47(8):3875-3887. (PMID: 30783652)
Cell. 2015 Apr 9;161(2):404-16. (PMID: 25843628)
Science. 2021 Jan 22;371(6527):. (PMID: 33479123)
Cell Stem Cell. 2020 Sep 3;27(3):482-497.e4. (PMID: 32673569)
Development. 2017 Aug 1;144(15):2784-2797. (PMID: 28684628)
Science. 2021 Jun 11;372(6547):. (PMID: 34112668)
Nature. 2012 Mar 07;483(7389):336-40. (PMID: 22398450)
Nature. 1994 Mar 10;368(6467):154-6. (PMID: 8139659)
Science. 2016 Oct 28;354(6311):468-472. (PMID: 27492478)
Genomics. 2007 Oct;90(4):453-63. (PMID: 17728098)
Proc Natl Acad Sci U S A. 2020 Feb 25;117(8):4262-4272. (PMID: 32041873)
Nat Struct Mol Biol. 2019 May;26(5):331-334. (PMID: 31061525)
Nat Commun. 2019 Jul 3;10(1):2950. (PMID: 31270318)
Development. 2009 Jan;136(1):139-46. (PMID: 19036803)
Bioessays. 2020 Apr;42(4):e1900163. (PMID: 32189388)
Cold Spring Harb Perspect Biol. 2022 May 17;14(4):. (PMID: 34312245)
Cell. 2021 Apr 1;184(7):1790-1803.e17. (PMID: 33735607)
Genome Res. 2001 May;11(5):833-49. (PMID: 11337478)
Sci Rep. 2019 Feb 20;9(1):2408. (PMID: 30787302)
Nat Methods. 2016 Jun;13(6):508-14. (PMID: 27018577)
Science. 2017 Jun 9;356(6342):1081-1084. (PMID: 28596365)
Dev Cell. 2016 Oct 10;39(1):9-10. (PMID: 27728783)
Nat Methods. 2016 Dec 29;14(1):5-6. (PMID: 28032625)
Philos Trans R Soc Lond B Biol Sci. 2017 Nov 5;372(1733):. (PMID: 28947660)
Nucleic Acids Res. 2020 Sep 18;48(16):9320-9335. (PMID: 32813011)
Nat Commun. 2014 Sep 11;5:4878. (PMID: 25209548)
Cell. 1992 Oct 30;71(3):527-42. (PMID: 1423611)
Nature. 2015 May 14;521(7551):232-6. (PMID: 25915022)
Cell. 2019 Jan 10;176(1-2):182-197.e23. (PMID: 30595450)
Mol Cell. 2017 Dec 7;68(5):955-969.e10. (PMID: 29220657)
Front Cell Dev Biol. 2019 Oct 22;7:241. (PMID: 31696116)
PLoS Genet. 2010 Dec 09;6(12):e1001244. (PMID: 21170310)
PLoS Genet. 2017 Jul 7;13(7):e1006890. (PMID: 28686623)
Mol Cell. 2014 Jan 23;53(2):301-16. (PMID: 24462204)
RNA. 2019 Aug;25(8):1004-1019. (PMID: 31097619)
Mol Cell. 2014 Aug 7;55(3):347-60. (PMID: 24999238)
Int J Mol Sci. 2021 Jan 23;22(3):. (PMID: 33498655)
Signal Transduct Target Ther. 2021 Feb 21;6(1):74. (PMID: 33611339)
EMBO J. 2006 Jul 12;25(13):3110-22. (PMID: 16763550)
Cell. 2021 Dec 9;184(25):6212. (PMID: 34890555)
Cell Rep. 2015 Jul 28;12(4):562-72. (PMID: 26190105)
PLoS Genet. 2021 Mar 22;17(3):e1009123. (PMID: 33750950)
RNA Biol. 2016;13(2):172-6. (PMID: 26786668)
Nature. 2020 Nov;587(7832):145-151. (PMID: 32908311)
Nat Commun. 2016 Nov 28;7:13661. (PMID: 27892467)
Nat Rev Mol Cell Biol. 2021 Dec;22(12):815-833. (PMID: 34400841)
Cell Rep. 2015 Jul 28;12(4):554-61. (PMID: 26190100)
Nat Genet. 2002 Feb;30(2):167-74. (PMID: 11780141)
Nat Struct Mol Biol. 2018 Sep;25(9):766-777. (PMID: 30127357)
Nat Commun. 2016 Aug 10;7:12354. (PMID: 27507283)
Nature. 2020 Feb;578(7795):455-460. (PMID: 32025035)
Genes Dev. 1997 Jan 15;11(2):156-66. (PMID: 9009199)
Cell Rep. 2018 Nov 13;25(7):1912-1923.e9. (PMID: 30428357)
Proc Natl Acad Sci U S A. 2017 Oct 3;114(40):10654-10659. (PMID: 28923964)
Nat Commun. 2020 Dec 2;11(1):6163. (PMID: 33268787)
Science. 2008 Oct 31;322(5902):750-6. (PMID: 18974356)
BMC Genet. 2014 Sep 09;15:89. (PMID: 25200388)
Lab Invest. 2019 Jul;99(7):1030-1040. (PMID: 31019288)
Chromosoma. 2021 Sep;130(2-3):177-197. (PMID: 33745031)
Mol Cell. 2019 Apr 4;74(1):101-117.e10. (PMID: 30827740)
EMBO Rep. 2021 Mar 3;22(3):e51989. (PMID: 33605056)
Development. 2020 Jan 3;147(1):. (PMID: 31900287)
Cell. 2016 May 19;165(5):1267-1279. (PMID: 27180905)
Cell. 2011 Jul 8;146(1):119-33. (PMID: 21729784)
Genes Dev. 2017 May 1;31(9):876-888. (PMID: 28546514)
EMBO Rep. 2019 Oct 4;20(10):e48019. (PMID: 31456285)
Nat Struct Mol Biol. 2017 Mar 3;24(3):197-204. (PMID: 28257137)
Nature. 2016 Sep 15;537(7620):369-373. (PMID: 27602518)
فهرسة مساهمة: Keywords: X-chromosome inactivation; chromatin; epigenetics; lncRNA; tandem repeat
المشرفين على المادة: 0 (Polycomb-Group Proteins)
0 (RNA, Long Noncoding)
0 (XIST non-coding RNA)
تواريخ الأحداث: Date Created: 20211209 Date Completed: 20220401 Latest Revision: 20240821
رمز التحديث: 20240821
مُعرف محوري في PubMed: PMC8786293
DOI: 10.1042/BST20210253
PMID: 34882219
قاعدة البيانات: MEDLINE
الوصف
تدمد:1470-8752
DOI:10.1042/BST20210253