دورية أكاديمية
Genomic Epidemiology of Salmonella enterica Circulating in Surface Waters Used in Agriculture and Aquaculture in Central Mexico.
| العنوان: | Genomic Epidemiology of Salmonella enterica Circulating in Surface Waters Used in Agriculture and Aquaculture in Central Mexico. |
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| المؤلفون: | Ballesteros-Nova NE; Facultad de Medicina Veterinaria y Zootecnia, Universidad Nacional Autónoma de México, Mexico City, México., Sánchez S; Facultad de Medicina Veterinaria y Zootecnia, Universidad Nacional Autónoma de México, Mexico City, México., Steffani JL; Evolution of Metabolic Diversity Laboratory, CINVESTAV-IPN, Irapuato, Mexico., Sierra LC; Facultad de Medicina Veterinaria y Zootecnia, Universidad Nacional Autónoma de México, Mexico City, México., Chen Z; Joint Institute for Food Safety & Applied Nutrition - Food and Drug Administration Center of Excellence and Center for Food Safety & Security Systems (CFS3), University of Maryland, College Park, Maryland, USA., Ruíz-López FA; Facultad de Medicina Veterinaria y Zootecnia, Universidad Nacional Autónoma de México, Mexico City, México., Bell RL; Office of Regulatory Science, Center for Food Safety and Applied Nutrition, U. S. Food and Drug Administration, College Park, Maryland, USA., Reed EA; Office of Regulatory Science, Center for Food Safety and Applied Nutrition, U. S. Food and Drug Administration, College Park, Maryland, USA., Balkey M; Office of Regulatory Science, Center for Food Safety and Applied Nutrition, U. S. Food and Drug Administration, College Park, Maryland, USA., Rubio-Lozano MS; Facultad de Medicina Veterinaria y Zootecnia, Universidad Nacional Autónoma de México, Mexico City, México., Soberanis-Ramos O; Facultad de Medicina Veterinaria y Zootecnia, Universidad Nacional Autónoma de México, Mexico City, México., Barona-Gómez F; Evolution of Metabolic Diversity Laboratory, CINVESTAV-IPN, Irapuato, Mexico., Brown EW; Office of Regulatory Science, Center for Food Safety and Applied Nutrition, U. S. Food and Drug Administration, College Park, Maryland, USA., Allard MW; Office of Regulatory Science, Center for Food Safety and Applied Nutrition, U. S. Food and Drug Administration, College Park, Maryland, USA., Meng J; Joint Institute for Food Safety & Applied Nutrition - Food and Drug Administration Center of Excellence and Center for Food Safety & Security Systems (CFS3), University of Maryland, College Park, Maryland, USA.; Department of Nutrition and Food Science, University of Maryland, College Park, Maryland, USA., Delgado-Suárez EJ; Facultad de Medicina Veterinaria y Zootecnia, Universidad Nacional Autónoma de México, Mexico City, México. |
| المصدر: | Applied and environmental microbiology [Appl Environ Microbiol] 2022 Mar 08; Vol. 88 (5), pp. e0214921. Date of Electronic Publication: 2022 Jan 12. |
| نوع المنشور: | Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, P.H.S. |
| اللغة: | English |
| بيانات الدورية: | Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 7605801 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1098-5336 (Electronic) Linking ISSN: 00992240 NLM ISO Abbreviation: Appl Environ Microbiol Subsets: MEDLINE |
| أسماء مطبوعة: | Original Publication: Washington, American Society for Microbiology. |
| مواضيع طبية MeSH: | Salmonella enterica*/genetics, Agriculture ; Aquaculture ; Genomics ; Humans ; Mexico/epidemiology |
| مستخلص: | Salmonella enterica can survive in surface waters (SuWa), and the role of nonhost environments in its transmission has acquired increasing relevance. In this study, we conducted comparative genomic analyses of 172 S. enterica isolates collected from SuWa across 3 months in six states of central Mexico during 2019. S. enterica transmission dynamics were assessed using 87 experimental and 112 public isolates from Mexico collected during 2002 through 2019. We also studied genetic relatedness between SuWa isolates and human clinical strains collected in North America during 2005 through 2020. Among experimental isolates, we identified 41 S. enterica serovars and 56 multilocus sequence types (STs). Predominant serovars were Senftenberg ( n = 13), Meleagridis, Agona, and Newport ( n = 12 each), Give ( n = 10), Anatum ( n = 8), Adelaide ( n = 7), and Infantis, Mbandaka, Ohio, and Typhimurium ( n = 6 each). We observed a high genetic diversity in the sample under study, as well as clonal dissemination of strains across distant regions. Some of these strains are epidemiologically important (ST14, ST45, ST118, ST132, ST198, and ST213) and were genotypically close to those involved in clinical cases in North America. Transmission network analysis suggests that SuWa are a relevant source of S. enterica (0.7 source/hub ratio) and contribute to its dissemination as isolates from varied sources and clinical cases have SuWa isolates as common ancestors. Overall, the study shows that SuWa act as reservoirs of various S. enterica serovars of public health significance. Further research is needed to better understand the mechanisms involved in SuWa contamination by S. enterica, as well as to develop interventions to contain its dissemination in food production settings. IMPORTANCE Surface waters are heavily used in food production worldwide. Several human pathogens can survive in these waters for long periods and disseminate to food production environments, contaminating our food supply. One of these pathogens is Salmonella enterica, a leading cause of foodborne infections, hospitalizations, and deaths in many countries. This research demonstrates the role of surface waters as a vehicle for the transmission of Salmonella along food production chains. It also shows that some strains circulating in surface waters are very similar to those implicated in human infections and harbor genes that confer resistance to multiple antibiotics, posing a risk to public health. This study contributes to expand our current knowledge on the ecology and epidemiology of Salmonella in surface waters. |
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| معلومات مُعتمدة: | U01 FD001418 United States FD FDA HHS |
| فهرسة مساهمة: | Keywords: Mexico; Salmonella; aquaculture; irrigation; phylogenetic analysis; serotyping; surface water; transmission dynamics; whole-genome sequencing |
| تواريخ الأحداث: | Date Created: 20220112 Date Completed: 20220325 Latest Revision: 20220325 |
| رمز التحديث: | 20221213 |
| مُعرف محوري في PubMed: | PMC8904062 |
| DOI: | 10.1128/aem.02149-21 |
| PMID: | 35020454 |
| قاعدة البيانات: | MEDLINE |
| تدمد: | 1098-5336 |
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| DOI: | 10.1128/aem.02149-21 |