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Complete genome sequences of two isolates of spiraea yellow leafspot virus (genus Badnavirus) from Spiraea x bumalda 'Anthony Waterer'.

التفاصيل البيبلوغرافية
العنوان: Complete genome sequences of two isolates of spiraea yellow leafspot virus (genus Badnavirus) from Spiraea x bumalda 'Anthony Waterer'.
المؤلفون: Alvarez-Quinto RA; Department of Plant Pathology, University of Minnesota, 495 Borlaug Hall, 1991 Upper Buford Circle, St. Paul, MN, 55108, USA. alvar419@umn.edu., Serrano J; Department of Plant Pathology, University of Minnesota, 495 Borlaug Hall, 1991 Upper Buford Circle, St. Paul, MN, 55108, USA., Olszewski N; Department of Plant Biology, University of Minnesota, St. Paul, MN, 55108, USA., Grinstead S; National Germplasm Resources Laboratory, USDA-ARS, Beltsville, MD, USA., Mollov D; USDA-ARS Horticultural Crops Research Unit, Corvallis, OR, 97331, USA., Lockhart BEL; Department of Plant Pathology, University of Minnesota, 495 Borlaug Hall, 1991 Upper Buford Circle, St. Paul, MN, 55108, USA.
المصدر: Archives of virology [Arch Virol] 2022 Feb; Vol. 167 (2), pp. 631-634. Date of Electronic Publication: 2022 Jan 14.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Springer-Verlag Country of Publication: Austria NLM ID: 7506870 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1432-8798 (Electronic) Linking ISSN: 03048608 NLM ISO Abbreviation: Arch Virol Subsets: MEDLINE
أسماء مطبوعة: Original Publication: Wien, New York, Springer-Verlag.
مواضيع طبية MeSH: Badnavirus*/genetics , Spiraea*, Genome, Viral ; Open Reading Frames ; Phylogeny ; Plant Diseases
مستخلص: The complete genome sequences of two isolates of spiraea yellow leafspot virus (SYLSV) were determined. Spiraea (Spiraea x bumalda) 'Anthony Waterer' plants showing virus-like symptoms including yellow spotting and leaf deformation were used for sequencing. The viral genome of SYLSV-MN (Minnesota) and SYLSV-MD (Maryland) is 8,017bp in length. The sequences share 95% identity at the nucleotide level. Both isolates have the same genome organization containing three open reading frames (ORFs), with ORF3 being the largest, encoding a putative polyprotein of 232 kDa with conserved domains including a zinc finger, pepsin-like aspartate protease, reverse transcriptase (RT), and RNase H. Pairwise comparisons between members of the genus Badnavirus showed that gooseberry vein banding associated virus GB1 (HQ852248) and rubus yellow net virus isolate Baumforth's Seedling A (KM078034) were the closest related virus sequences to SYLSV, sharing 73% identity at the nucleotide level. Bacilliform virions with dimensions of 150 nm × 30 nm were observed in virus preparations from symptomatic, but not asymptomatic, plants.
(© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature.)
References: Lockhart BEL, Geering ADW (2002) Partial characterization of two aphid-transmitted viruses associated with yellow leafspot of Spiraea. Acta Hortic 568:163–168. https://doi.org/10.17660/ActaHortic.2002.568.24. (PMID: 10.17660/ActaHortic.2002.568.24)
Alvarez-Quinto RA, Lockhart BEL, Olszewski N (2019) Complete genome sequence of a previously undescribed badnavirus occurring in Polyscias fruticosa L. (Ming aralia). Arch Virol. https://doi.org/10.1007/s00705-019-04307-9. (PMID: 10.1007/s00705-019-04307-931679082)
Teycheney PY, Geering ADW, Dasgupta I et al (2020) ICTV Virus taxonomy profile: Caulimoviridae. J Gen Virol 101:1025–1026. (PMID: 10.1099/jgv.0.001497)
Geering ADW (2021) Badnaviruses (Caulimoviridae). In: Bamford DH, Zuckerman M (eds) Encyclopedia of virology. Academic P Elsevier, Oxford, pp 158–168. (PMID: 10.1016/B978-0-12-814515-9.00147-8)
معلومات مُعتمدة: 1009997 national institute of food and agriculture
تواريخ الأحداث: Date Created: 20220114 Date Completed: 20220216 Latest Revision: 20220216
رمز التحديث: 20221213
DOI: 10.1007/s00705-021-05336-z
PMID: 35028739
قاعدة البيانات: MEDLINE
الوصف
تدمد:1432-8798
DOI:10.1007/s00705-021-05336-z