دورية أكاديمية
أعرض في EDS

Genome sequence data of the antagonistic soil-borne yeast Cyberlindnera sargentensis (SHA 17.2).

التفاصيل البيبلوغرافية
العنوان: Genome sequence data of the antagonistic soil-borne yeast Cyberlindnera sargentensis (SHA 17.2).
المؤلفون: Rueda-Mejia MP; Agroscope, Research Division Plant Protection, Müller-Thurgau-Strasse 29, Wädenswil 8820, Switzerland., Nägeli L; Agroscope, Research Division Plant Protection, Müller-Thurgau-Strasse 29, Wädenswil 8820, Switzerland., Lutz S; Agroscope, Competence Division Method Development and Analytics, Müller-Thurgau-Strasse 29, Wädenswil 8820, Switzerland., Ortiz-Merino RA; Conway Institute, University College Dublin, Dublin 4, Ireland., Frei D; Agroscope, Competence Division Method Development and Analytics, Müller-Thurgau-Strasse 29, Wädenswil 8820, Switzerland., Frey JE; Agroscope, Competence Division Method Development and Analytics, Müller-Thurgau-Strasse 29, Wädenswil 8820, Switzerland., Wolfe KH; Conway Institute, University College Dublin, Dublin 4, Ireland., Ahrens CH; Agroscope, Competence Division Method Development and Analytics, Müller-Thurgau-Strasse 29, Wädenswil 8820, Switzerland.; SIB, Swiss Institute of Bioinformatics, Müller-Thurgau-Strasse 29, Wädenswil 8820, Switzerland., Freimoser FM; Agroscope, Research Division Plant Protection, Müller-Thurgau-Strasse 29, Wädenswil 8820, Switzerland.
المصدر: Data in brief [Data Brief] 2022 Jan 05; Vol. 40, pp. 107799. Date of Electronic Publication: 2022 Jan 05 (Print Publication: 2022).
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Elsevier B.V Country of Publication: Netherlands NLM ID: 101654995 Publication Model: eCollection Cited Medium: Internet ISSN: 2352-3409 (Electronic) Linking ISSN: 23523409 NLM ISO Abbreviation: Data Brief Subsets: PubMed not MEDLINE
أسماء مطبوعة: Original Publication: [Amsterdam] : Elsevier B.V., [2014]-
مستخلص: Cyberlindnera sargentensis strain SHA 17.2, isolated from a Swiss soil sample, exhibited strong antagonistic activity against several plant pathogenic fungi in vitro and was highly competitive against other yeasts in soil . As a basis for identifying the mechanisms underlying its strong antagonistic activity, we have sequenced the genome of C. sargentensis (SHA 17.2) by long- and short read sequencing, de novo assembled them into seven contigs/chromosomes and a mitogenome (total genome size 11.4 Mbp), and annotated 5455 genes. This high-quality genome is the reference for transcriptome and proteome analyses aiming at elucidating the mode of action of C. sargentensis against fungal plant pathogens. It will thus serve as a resource for identifying potential biocontrol genes and performing comparative genomics analyses of yeast genomes.
Competing Interests: The authors declare that they have no known competing financial interests or personal relationships, which have or could be perceived to have influenced the work reported in this article.
(© 2022 The Authors.)
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فهرسة مساهمة: Keywords: Antagonism; Biocontrol; Genome assembly and annotation; Mechanism; Plant protection; Yeast
تواريخ الأحداث: Date Created: 20220124 Latest Revision: 20220125
رمز التحديث: 20221213
مُعرف محوري في PubMed: PMC8762083
DOI: 10.1016/j.dib.2022.107799
PMID: 35071701
قاعدة البيانات: MEDLINE
الوصف
تدمد:2352-3409
DOI:10.1016/j.dib.2022.107799