دورية أكاديمية
Genome sequence data of the antagonistic soil-borne yeast Cyberlindnera sargentensis (SHA 17.2).
العنوان: | Genome sequence data of the antagonistic soil-borne yeast Cyberlindnera sargentensis (SHA 17.2). |
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المؤلفون: | Rueda-Mejia MP; Agroscope, Research Division Plant Protection, Müller-Thurgau-Strasse 29, Wädenswil 8820, Switzerland., Nägeli L; Agroscope, Research Division Plant Protection, Müller-Thurgau-Strasse 29, Wädenswil 8820, Switzerland., Lutz S; Agroscope, Competence Division Method Development and Analytics, Müller-Thurgau-Strasse 29, Wädenswil 8820, Switzerland., Ortiz-Merino RA; Conway Institute, University College Dublin, Dublin 4, Ireland., Frei D; Agroscope, Competence Division Method Development and Analytics, Müller-Thurgau-Strasse 29, Wädenswil 8820, Switzerland., Frey JE; Agroscope, Competence Division Method Development and Analytics, Müller-Thurgau-Strasse 29, Wädenswil 8820, Switzerland., Wolfe KH; Conway Institute, University College Dublin, Dublin 4, Ireland., Ahrens CH; Agroscope, Competence Division Method Development and Analytics, Müller-Thurgau-Strasse 29, Wädenswil 8820, Switzerland.; SIB, Swiss Institute of Bioinformatics, Müller-Thurgau-Strasse 29, Wädenswil 8820, Switzerland., Freimoser FM; Agroscope, Research Division Plant Protection, Müller-Thurgau-Strasse 29, Wädenswil 8820, Switzerland. |
المصدر: | Data in brief [Data Brief] 2022 Jan 05; Vol. 40, pp. 107799. Date of Electronic Publication: 2022 Jan 05 (Print Publication: 2022). |
نوع المنشور: | Journal Article |
اللغة: | English |
بيانات الدورية: | Publisher: Elsevier B.V Country of Publication: Netherlands NLM ID: 101654995 Publication Model: eCollection Cited Medium: Internet ISSN: 2352-3409 (Electronic) Linking ISSN: 23523409 NLM ISO Abbreviation: Data Brief Subsets: PubMed not MEDLINE |
أسماء مطبوعة: | Original Publication: [Amsterdam] : Elsevier B.V., [2014]- |
مستخلص: | Cyberlindnera sargentensis strain SHA 17.2, isolated from a Swiss soil sample, exhibited strong antagonistic activity against several plant pathogenic fungi in vitro and was highly competitive against other yeasts in soil . As a basis for identifying the mechanisms underlying its strong antagonistic activity, we have sequenced the genome of C. sargentensis (SHA 17.2) by long- and short read sequencing, de novo assembled them into seven contigs/chromosomes and a mitogenome (total genome size 11.4 Mbp), and annotated 5455 genes. This high-quality genome is the reference for transcriptome and proteome analyses aiming at elucidating the mode of action of C. sargentensis against fungal plant pathogens. It will thus serve as a resource for identifying potential biocontrol genes and performing comparative genomics analyses of yeast genomes. Competing Interests: The authors declare that they have no known competing financial interests or personal relationships, which have or could be perceived to have influenced the work reported in this article. (© 2022 The Authors.) |
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فهرسة مساهمة: | Keywords: Antagonism; Biocontrol; Genome assembly and annotation; Mechanism; Plant protection; Yeast |
تواريخ الأحداث: | Date Created: 20220124 Latest Revision: 20220125 |
رمز التحديث: | 20221213 |
مُعرف محوري في PubMed: | PMC8762083 |
DOI: | 10.1016/j.dib.2022.107799 |
PMID: | 35071701 |
قاعدة البيانات: | MEDLINE |
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