دورية أكاديمية
أعرض في EDS

Loop-Mediated Isothermal Amplification Detection of SARS-CoV-2 and Myriad Other Applications.

التفاصيل البيبلوغرافية
العنوان: Loop-Mediated Isothermal Amplification Detection of SARS-CoV-2 and Myriad Other Applications.
المؤلفون: Moore KJM; School of Science and Engineering, Ateneo de Manila University, Quezon City 1108, Philippines., Cahill J; Metamer Labs, Boston, MA 02111-1929, USA., Aidelberg G; Université de Paris, INSERM U1284, Center for Research and Interdisciplinarity (CRI), 75006 Paris, France.; Just One Giant Lab, Centre de Recherches Interdisciplinaires (CRI), 75004 Paris, France., Aronoff R; Just One Giant Lab, Centre de Recherches Interdisciplinaires (CRI), 75004 Paris, France.; Action for Genomic Integrity Through Research! (AGiR!), Lausanne, Switzerland.; Association Hackuarium, Lausanne, Switzerland., Bektaş A; Oakland Genomics Center, Oakland, CA 94609, USA., Bezdan D; Institute of Medical Genetics and Applied Genomics, University of Tübingen, 72076 Tübingen, Germany.; NGS Competence Center Tübingen (NCCT), University of Tübingen, 72076 Tübingen, Germany.; Poppy Health, Inc, San Francisco, CA 94158, USA.; Institute of Medical Virology and Epidemiology of Viral Diseases, University Hospital, 72076 Tübingen, Germany., Butler DJ; Department of Physiology and Biophysics, Weill Cornell Medicine, New York, NY 10065, USA.; The HRH Prince Alwaleed Bin Talal Bin Abdulaziz Alsaud Institute for Computational Biomedicine, Weill Cornell Medicine, New York, NY 10065, USA., Chittur SV; Center for Functional Genomics, Department of Biomedical Sciences, School of Public Health, University at Albany, State University of New York, Rensselaer, 12222, USA., Codyre M; GiantLeap Biotechnology Ltd, Wicklow A63 Kv91, Ireland., Federici F; ANID, Millennium Science Initiative Program, Millennium Institute for Integrative Biology (iBio), Institute for Biological and Medical Engineering, Schools of Engineering, Biology and Medicine, Pontificia Universidad Católica de Chile, Santiago 8331150, Chile., Tanner NA; New England Biolabs, Ipswich, MA 01938, USA., Tighe SW; University of Vermont, Burlington, 05405, USA., True R; FloodLAMP Biotechnologies, San Carlos, CA 94070, USA., Ware SB; Just One Giant Lab, Centre de Recherches Interdisciplinaires (CRI), 75004 Paris, France.; BioBlaze Community Bio Lab, 1800 W Hawthorne Ln, Ste J-1, West Chicago, IL 60185, USA.; Blossom Bio Lab, 1800 W Hawthorne Ln, Ste K-2, West Chicago, IL 60185, USA., Wyllie AL; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT 06510, USA., Afshin EE; Department of Physiology and Biophysics, Weill Cornell Medicine, New York, NY 10065, USA.; The HRH Prince Alwaleed Bin Talal Bin Abdulaziz Alsaud Institute for Computational Biomedicine, Weill Cornell Medicine, New York, NY 10065, USA.; The WorldQuant Initiative for Quantitative Prediction, Weill Cornell Medicine, New York, NY 10065, USA., Bendesky A; Department of Ecology, Evolution and Environmental Biology, Columbia University, New York, NY 10027, USA.; Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA., Chang CB; Department of Chemical and Biological Engineering, Montana State University, Bozeman, 59717, USA.; Center for Biofilm Engineering, Montana State University, Bozeman, 59717, USA., Dela Rosa R 2nd; School of Science and Engineering, Ateneo de Manila University, Quezon City 1108, Philippines., Elhaik E; Department of Biology, Lund University, Sölvegatan 35, Lund, Sweden., Erickson D; Sibley School of Mechanical and Aerospace Engineering, Cornell University, Ithaca, NY 14850, USA., Goldsborough AS; RNAssist Ltd, Cambridge CB1 1EE, England., Grills G; Department of Microbiology, University of Pennsylvania, Philadelphia, 19104, USA., Hadasch K; Université de Paris, INSERM U1284, Center for Research and Interdisciplinarity (CRI), 75006 Paris, France.; Department of Biology, Membrane Biophysics, Technische Universität Darmstadt, 64289 Darmstadt, Germany.; Lab3 eV, Labspace Darmstadt, 64295 Darmstadt, Germany.; IANUS Verein für Friedensorientierte Technikgestaltung eV, 64289 Darmstadt, Germany., Hayden A; Center for Functional Genomics, Department of Biomedical Sciences, School of Public Health, University at Albany, State University of New York, Rensselaer, 12222, USA., Her SY; Metamer Labs, Boston, MA 02111-1929, USA., Karl JA; Department of Pathology and Laboratory Medicine, School of Medicine and Public Health, University of Wisconsin, Madison, Madison 53705, USA., Kim CH; GoDx, Inc, Madison, WI 53719, USA., Kriegel AJ; Medical College of Wisconsin, Milwaukee, 53226, USA., Kunstman T; University of Colorado, Boulder, CO 80309, USA., Landau Z; Department of Computer Science, University of California, Berkeley, Berkeley, 94720, USA., Land K; Mologic, Centre for Advanced Rapid Diagnostics, (CARD), Bedford Technology Park, Thurleigh MK44 2YA, England.; Department of Electrical, Electronic and Computer Engineering, University of Pretoria, 0028 Pretoria, South Africa., Langhorst BW; New England Biolabs, Ipswich, MA 01938, USA., Lindner AB; Université de Paris, INSERM U1284, Center for Research and Interdisciplinarity (CRI), 75006 Paris, France., Mayer BE; Department of Biology, Membrane Biophysics, Technische Universität Darmstadt, 64289 Darmstadt, Germany.; Lab3 eV, Labspace Darmstadt, 64295 Darmstadt, Germany., McLaughlin LA; IC Mobile Lab Ltd, SpacePortx, M1 1DZ Manchester, England., McLaughlin MT; Department of Pathology and Laboratory Medicine, School of Medicine and Public Health, University of Wisconsin, Madison, Madison 53705, USA., Molloy J; Department of Chemical Engineering and Biotechnology, University of Cambridge, Cambridge CB3 0AS, England., Mozsary C; Department of Physiology and Biophysics, Weill Cornell Medicine, New York, NY 10065, USA.; The HRH Prince Alwaleed Bin Talal Bin Abdulaziz Alsaud Institute for Computational Biomedicine, Weill Cornell Medicine, New York, NY 10065, USA., Nadler JL; Department of Pharmacology, New York Medical College, Valhalla, 10595, USA., D'Silva M; Department of Pharmacology, New York Medical College, Valhalla, 10595, USA., Ng D; Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA., O'Connor DH; Department of Pathology and Laboratory Medicine, School of Medicine and Public Health, University of Wisconsin, Madison, Madison 53705, USA., Ongerth JE; University of Wollongong, Environmental Engineering, Wollongong NSW 2522, Australia., Osuolale O; Applied Environmental Metagenomics and Infectious Diseases Research (AEMIDR), Department of Biological Sciences, Elizade University, Ilara Mokin, Nigeria., Pinharanda A; Department of Biological Sciences, Columbia University, New York, NY 10027, USA., Plenker D; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA., Ranjan R; Genomics Resource Laboratory, Institute for Applied Life Sciences, University of Massachusetts, Amherst, 01003, USA., Rosbash M; Howard Hughes Medical Institute and Department of Biology, Brandeis University, Waltham, MA 02453, USA., Rotem A; Metamer Labs, Boston, MA 02111-1929, USA., Segarra J; Metamer Labs, Boston, MA 02111-1929, USA., Schürer S; University of Florida, Miami, 33146, USA., Sherrill-Mix S; Department of Microbiology, University of Pennsylvania, Philadelphia, 19104, USA., Solo-Gabriele H; University of Florida, Miami, 33146, USA., To S; School of Science and Engineering, Ateneo de Manila University, Quezon City 1108, Philippines., Vogt MC; Department of Biological Sciences, Columbia University, New York, NY 10027, USA., Yu AD; Howard Hughes Medical Institute and Department of Biology, Brandeis University, Waltham, MA 02453, USA., Mason CE; Department of Physiology and Biophysics, Weill Cornell Medicine, New York, NY 10065, USA.; The HRH Prince Alwaleed Bin Talal Bin Abdulaziz Alsaud Institute for Computational Biomedicine, Weill Cornell Medicine, New York, NY 10065, USA.; The WorldQuant Initiative for Quantitative Prediction, Weill Cornell Medicine, New York, NY 10065, USA.; The Feil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, NY 10065, USA.
مؤلفون مشاركون: gLAMP Consortium
المصدر: Journal of biomolecular techniques : JBT [J Biomol Tech] 2021 Sep; Vol. 32 (3), pp. 228-275.
نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Review
اللغة: English
بيانات الدورية: Publisher: Association of Biomolecular Resource Facilities Country of Publication: United States NLM ID: 100888641 Publication Model: Print Cited Medium: Internet ISSN: 1943-4731 (Electronic) Linking ISSN: 15240215 NLM ISO Abbreviation: J Biomol Tech Subsets: MEDLINE
أسماء مطبوعة: Original Publication: Santa Fe, NM : Association of Biomolecular Resource Facilities
مواضيع طبية MeSH: COVID-19*/diagnosis , Nucleic Acid Amplification Techniques* , SARS-CoV-2*/isolation & purification, COVID-19 Nucleic Acid Testing ; Humans ; Molecular Diagnostic Techniques ; Pandemics ; RNA, Viral
مستخلص: As the second year of the COVID-19 pandemic begins, it remains clear that a massive increase in the ability to test for SARS-CoV-2 infections in a myriad of settings is critical to controlling the pandemic and to preparing for future outbreaks. The current gold standard for molecular diagnostics is the polymerase chain reaction (PCR), but the extraordinary and unmet demand for testing in a variety of environments means that both complementary and supplementary testing solutions are still needed. This review highlights the role that loop-mediated isothermal amplification (LAMP) has had in filling this global testing need, providing a faster and easier means of testing, and what it can do for future applications, pathogens, and the preparation for future outbreaks. This review describes the current state of the art for research of LAMP-based SARS-CoV-2 testing, as well as its implications for other pathogens and testing. The authors represent the global LAMP (gLAMP) Consortium, an international research collective, which has regularly met to share their experiences on LAMP deployment and best practices; sections are devoted to all aspects of LAMP testing, including preanalytic sample processing, target amplification, and amplicon detection, then the hardware and software required for deployment are discussed, and finally, a summary of the current regulatory landscape is provided. Included as well are a series of first-person accounts of LAMP method development and deployment. The final discussion section provides the reader with a distillation of the most validated testing methods and their paths to implementation. This review also aims to provide practical information and insight for a range of audiences: for a research audience, to help accelerate research through sharing of best practices; for an implementation audience, to help get testing up and running quickly; and for a public health, clinical, and policy audience, to help convey the breadth of the effect that LAMP methods have to offer.
(© 2021 ABRF.)
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معلومات مُعتمدة: U01 DA053941 United States DA NIDA NIH HHS; R01 AI125416 United States AI NIAID NIH HHS; UL1 TR001863 United States TR NCATS NIH HHS; R01 AI151059 United States AI NIAID NIH HHS; R21 AI129851 United States AI NIAID NIH HHS; P30 CA045508 United States CA NCI NIH HHS; UL1 TR000457 United States TR NCATS NIH HHS
المشرفين على المادة: 0 (RNA, Viral)
SCR Protocol: LAMP assay
تواريخ الأحداث: Date Created: 20220209 Date Completed: 20220211 Latest Revision: 20231105
رمز التحديث: 20240628
مُعرف محوري في PubMed: PMC8802757
DOI: 10.7171/jbt.21-3203-017
PMID: 35136384
قاعدة البيانات: MEDLINE
الوصف
تدمد:1943-4731
DOI:10.7171/jbt.21-3203-017