دورية أكاديمية
أعرض في EDS

Gene age shapes the transcriptional landscape of sexual morphogenesis in mushroom-forming fungi (Agaricomycetes).

التفاصيل البيبلوغرافية
العنوان: Gene age shapes the transcriptional landscape of sexual morphogenesis in mushroom-forming fungi (Agaricomycetes).
المؤلفون: Merényi Z; Synthetic and Systems Biology Unit, Biological Research Center, Szeged, Hungary., Virágh M; Synthetic and Systems Biology Unit, Biological Research Center, Szeged, Hungary., Gluck-Thaler E; Department of Biology, University of Pennsylvania, Philadelphia, United States., Slot JC; College of Food, Agricultural, and Environmental Sciences, Department of Plant Pathology, Ohio State University, Columbus, United States., Kiss B; Synthetic and Systems Biology Unit, Biological Research Center, Szeged, Hungary., Varga T; Synthetic and Systems Biology Unit, Biological Research Center, Szeged, Hungary., Geösel A; Institute of Horticultural Science, Department of Vegetable and Mushroom Growing, Hungarian University of Agriculture and Life Sciences, Budapest, Hungary., Hegedüs B; Synthetic and Systems Biology Unit, Biological Research Center, Szeged, Hungary., Bálint B; Synthetic and Systems Biology Unit, Biological Research Center, Szeged, Hungary., Nagy LG; Synthetic and Systems Biology Unit, Biological Research Center, Szeged, Hungary.; Department of Plant Anatomy, Institute of Biology, Eötvös Loránd University, Budapest, Hungary.
المصدر: ELife [Elife] 2022 Feb 14; Vol. 11. Date of Electronic Publication: 2022 Feb 14.
نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't
اللغة: English
بيانات الدورية: Publisher: eLife Sciences Publications, Ltd Country of Publication: England NLM ID: 101579614 Publication Model: Electronic Cited Medium: Internet ISSN: 2050-084X (Electronic) Linking ISSN: 2050084X NLM ISO Abbreviation: Elife Subsets: MEDLINE
أسماء مطبوعة: Original Publication: Cambridge, UK : eLife Sciences Publications, Ltd., 2012-
مواضيع طبية MeSH: Agaricales*/genetics , Agaricales*/metabolism , Ascomycota*/metabolism , Basidiomycota*, Fruiting Bodies, Fungal/genetics ; Fruiting Bodies, Fungal/metabolism ; Fungal Proteins/metabolism ; Gene Expression Regulation, Fungal
مستخلص: Multicellularity has been one of the most important innovations in the history of life. The role of gene regulatory changes in driving transitions to multicellularity is being increasingly recognized; however, factors influencing gene expression patterns are poorly known in many clades. Here, we compared the developmental transcriptomes of complex multicellular fruiting bodies of eight Agaricomycetes and Cryptococcus neoformans , a closely related human pathogen with a simple morphology. In-depth analysis in Pleurotus ostreatus revealed that allele-specific expression, natural antisense transcripts, and developmental gene expression, but not RNA editing or a 'developmental hourglass,' act in concert to shape its transcriptome during fruiting body development. We found that transcriptional patterns of genes strongly depend on their evolutionary ages. Young genes showed more developmental and allele-specific expression variation, possibly because of weaker evolutionary constraint, suggestive of nonadaptive expression variance in fruiting bodies. These results prompted us to define a set of conserved genes specifically regulated only during complex morphogenesis by excluding young genes and accounting for deeply conserved ones shared with species showing simple sexual development. Analysis of the resulting gene set revealed evolutionary and functional associations with complex multicellularity, which allowed us to speculate they are involved in complex multicellular morphogenesis of mushroom fruiting bodies.
Competing Interests: ZM, MV, EG, JS, BK, TV, AG, BH, BB, LN No competing interests declared
(© 2022, Merényi et al.)
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معلومات مُعتمدة: 758161 International ERC_ European Research Council
فهرسة مساهمة: Keywords: Coprinopsis cinerea; Cryptococcus neoformans; Pleurotus ostreatus; allelic imbalance; developmental biology; developmental hourglass; evolutionary biology; mushroom-forming fungi
سلسلة جزيئية: Dryad 10.5061/dryad.5qfttdz5m
GEO GSE176181; GSE125198; GSE125184; GSE125199; GSE111975; GSE132826; GSE100213
المشرفين على المادة: 0 (Fungal Proteins)
تواريخ الأحداث: Date Created: 20220214 Date Completed: 20220429 Latest Revision: 20220727
رمز التحديث: 20221213
مُعرف محوري في PubMed: PMC8893723
DOI: 10.7554/eLife.71348
PMID: 35156613
قاعدة البيانات: MEDLINE
الوصف
تدمد:2050-084X
DOI:10.7554/eLife.71348