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Standardized annotation of translated open reading frames.

التفاصيل البيبلوغرافية
العنوان: Standardized annotation of translated open reading frames.
المؤلفون: Mudge JM; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK. jmudge@ebi.ac.uk., Ruiz-Orera J; Cardiovascular and Metabolic Sciences, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany. jorge.ruizorera@mdc-berlin.de., Prensner JR; Broad Institute of MIT and Harvard, Cambridge, MA, USA. prensner@broadinstitute.org.; Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA, USA. prensner@broadinstitute.org.; Division of Pediatric Hematology/Oncology, Boston Children's Hospital, Boston, MA, USA. prensner@broadinstitute.org., Brunet MA; Department of Pediatrics, Medical Genetics Service, Université de Sherbrooke, Sherbrooke, Quebec, Canada., Calvet F; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK., Jungreis I; Broad Institute of MIT and Harvard, Cambridge, MA, USA.; MIT Computer Science and Artificial Intelligence Laboratory, Cambridge, MA, USA., Gonzalez JM; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK., Magrane M; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK., Martinez TF; Clayton Foundation Laboratories for Peptide Biology, Salk Institute for Biological Studies, La Jolla, CA, USA.; Department of Pharmaceutical Sciences, University of California, Irvine, CA, USA., Schulz JF; Cardiovascular and Metabolic Sciences, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany., Yang YT; Program in Computational Biology & Bioinformatics, Yale University, New Haven, CT, USA.; Department of Molecular Biophysics & Biochemistry, Yale University, New Haven, CT, USA., Albà MM; Evolutionary Genomics Group, Research Programme on Biomedical Informatics, Hospital del Mar Research Institute (IMIM) and Universitat Pompeu Fabra (UPF), Barcelona, Spain.; Catalan Institution for Research and Advanced Studies (ICREA), Barcelona, Spain., Aspden JL; School of Molecular and Cellular Biology, Faculty of Biological Sciences, University of Leeds, Leeds, UK.; LeedsOmics, University of Leeds, Leeds, UK., Baranov PV; School of Biochemistry and Cell Biology, University College Cork, Cork, Ireland., Bazzini AA; Stowers Institute for Medical Research, Kansas City, MO, USA.; Department of Molecular and Integrative Physiology, University of Kansas Medical Center, Kansas City, KS, USA., Bruford E; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.; Department of Haematology, University of Cambridge School of Clinical Medicine, Cambridge, UK., Martin MJ; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK., Calviello L; Functional Genomics Centre, Human Technopole, Milan, Italy.; Computational Biology Centre, Human Technopole, Milan, Italy., Carvunis AR; Department of Computational and Systems Biology, School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA.; Pittsburgh Center for Evolutionary Biology and Medicine, School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA., Chen J; Department of Pharmacology and Cecil H. and Ida Green Center for Reproductive Biology Sciences, University of Texas Southwestern Medical Center, Dallas, TX, USA., Couso JP; Centro Andaluz de Biologia del Desarrollo, CSIC-UPO, Seville, Spain., Deutsch EW; Institute for Systems Biology, Seattle, WA, USA., Flicek P; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK., Frankish A; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK., Gerstein M; Program in Computational Biology & Bioinformatics, Yale University, New Haven, CT, USA.; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA.; Department of Computer Science, Yale University, New Haven, CT, USA.; Department of Statistics & Data Science, Yale University, New Haven, CT, USA., Hubner N; Cardiovascular and Metabolic Sciences, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany.; Charité-Universitätsmedizin, Berlin, Germany.; DZHK (German Centre for Cardiovascular Research), Partner Site Berlin, Berlin, Germany., Ingolia NT; Department of Molecular and Cell Biology and California Institute for Quantitative Biosciences, University of California, Berkeley, Berkeley, CA, USA., Kellis M; Broad Institute of MIT and Harvard, Cambridge, MA, USA.; MIT Computer Science and Artificial Intelligence Laboratory, Cambridge, MA, USA., Menschaert G; Biobix, Lab of Bioinformatics and Computational Genomics, Department of Mathematical Modelling, Statistics and Bioinformatics, Ghent University, Ghent, Belgium., Moritz RL; Institute for Systems Biology, Seattle, WA, USA., Ohler U; Berlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany.; Department of Biology, Humboldt-Universität zu Berlin, Berlin, Germany.; Department of Computer Science, Humboldt-Universität zu Berlin, Berlin, Germany., Roucou X; Department of Biochemistry and Functional Genomics, Université de Sherbrooke, Sherbrooke, Québec, Canada., Saghatelian A; Clayton Foundation Laboratories for Peptide Biology, Salk Institute for Biological Studies, La Jolla, CA, USA., Weissman JS; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.; Whitehead Institute for Biomedical Research, Cambridge, MA, USA.; Howard Hughes Medical Institute, Massachusetts Institute of Technology, Cambridge, MA, USA., van Heesch S; Princess Máxima Center for Pediatric Oncology, Utrecht, the Netherlands. S.vanHeesch@prinsesmaximacentrum.nl.
المصدر: Nature biotechnology [Nat Biotechnol] 2022 Jul; Vol. 40 (7), pp. 994-999.
نوع المنشور: Letter; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, N.I.H., Extramural
اللغة: English
بيانات الدورية: Publisher: Nature America Publishing Country of Publication: United States NLM ID: 9604648 Publication Model: Print Cited Medium: Internet ISSN: 1546-1696 (Electronic) Linking ISSN: 10870156 NLM ISO Abbreviation: Nat Biotechnol Subsets: MEDLINE
أسماء مطبوعة: Publication: New York Ny : Nature America Publishing
Original Publication: New York, NY : Nature Pub. Co., [1996-
مواضيع طبية MeSH: Protein Biosynthesis* , Ribosomes*/metabolism, Molecular Sequence Annotation ; Open Reading Frames
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معلومات مُعتمدة: 208349/Z/17/Z United Kingdom WT_ Wellcome Trust; R24 GM127667 United States GM NIGMS NIH HHS; U19 AG023122 United States AG NIA NIH HHS; 210692/Z/18/Z United Kingdom WT_ Wellcome Trust; F32 GM123685 United States GM NIGMS NIH HHS; United States HHMI Howard Hughes Medical Institute; U41 HG007234 United States HG NHGRI NIH HHS; U24 HG007822 United States HG NHGRI NIH HHS; MR/N000471/1 United Kingdom MRC_ Medical Research Council; S10 OD026936 United States OD NIH HHS; United Kingdom WT_ Wellcome Trust; R01 HG004037 United States HG NHGRI NIH HHS; BB/S007407/1 United Kingdom BB_ Biotechnology and Biological Sciences Research Council; R01 GM136849 United States GM NIGMS NIH HHS; R01 GM087221 United States GM NIGMS NIH HHS; 108749/Z/15/Z United Kingdom WT_ Wellcome Trust; DP2 GM137422 United States GM NIGMS NIH HHS; R01 GM130996 United States GM NIGMS NIH HHS; K12 CA090354 United States CA NCI NIH HHS; U24 HG007234 United States HG NHGRI NIH HHS; U24 HG003345 United States HG NHGRI NIH HHS; R00 GM134154 United States GM NIGMS NIH HHS
تواريخ الأحداث: Date Created: 20220713 Date Completed: 20220719 Latest Revision: 20240514
رمز التحديث: 20240514
مُعرف محوري في PubMed: PMC9757701
DOI: 10.1038/s41587-022-01369-0
PMID: 35831657
قاعدة البيانات: MEDLINE
الوصف
تدمد:1546-1696
DOI:10.1038/s41587-022-01369-0