NF-κB inhibitor alpha has a cross-variant role during SARS-CoV-2 infection in ACE2-overexpressing human airway organoids.

التفاصيل البيبلوغرافية
العنوان: NF-κB inhibitor alpha has a cross-variant role during SARS-CoV-2 infection in ACE2-overexpressing human airway organoids.
المؤلفون: Simoneau CR; Gladstone Institute of Virology, San Francisco, CA, USA.; Biomedical Sciences Graduate Program, University of California San Francisco, San Francisco, CA, USA., Chen PY; Gladstone Institute of Virology, San Francisco, CA, USA., Xing GK; Chan-Zuckerberg Biohub, San Francisco, CA, USA.; Center for Computational Biology, University of California, Berkeley, Berkeley CA, USA., Khalid MM; Gladstone Institute of Virology, San Francisco, CA, USA., Meyers NL; Gladstone Institute of Virology, San Francisco, CA, USA., Hayashi JM; Gladstone Institute of Virology, San Francisco, CA, USA., Taha TY; Gladstone Institute of Virology, San Francisco, CA, USA., Leon KE; Gladstone Institute of Virology, San Francisco, CA, USA.; Medical Scientist Training Program, University of California San Francisco, San Francisco, CA, USA., Ashuach T; Center for Computational Biology, University of California, Berkeley, Berkeley CA, USA., Fontaine KA; Gladstone Institute of Virology, San Francisco, CA, USA., Rodriguez L; ImmunoX CoLabs, University of California San Francisco, San Francisco, CA, USA., Joehnk B; Department of Microbiology and Immunology, University of California San Francisco, San Francisco, CA, USA., Walcott K; Department of Microbiology and Immunology, University of California San Francisco, San Francisco, CA, USA., Vasudevan S; Medical Service, San Francisco VA Healthcare System, San Francisco, CA, USA., Fang X; Department of Medicine and Department of Anesthesia, Cardiovascular Research Institute, University of California San Francisco, San Francisco, CA, USA., Maishan M; Department of Medicine and Department of Anesthesia, Cardiovascular Research Institute, University of California San Francisco, San Francisco, CA, USA., Schultz S; Center for Computational Biology, University of California, Berkeley, Berkeley CA, USA., Roose J; Department of Anatomy, University of California San Francisco, San Francisco, CA, USA., Matthay MA; Department of Medicine and Department of Anesthesia, Cardiovascular Research Institute, University of California San Francisco, San Francisco, CA, USA., Sil A; Department of Microbiology and Immunology, University of California San Francisco, San Francisco, CA, USA., Arjomandi M; Medical Service, San Francisco VA Healthcare System, San Francisco, CA, USA.; Division of Pulmonary and Critical Care, Department of Medicine, University of California San Francisco, San Francisco, CA, USA., Yosef N; Center for Computational Biology, University of California, Berkeley, Berkeley CA, USA.; Department of Systems Immunology, Weizmann Institute of Science, Rehovot, Israel., Ott M; Gladstone Institute of Virology, San Francisco, CA, USA.; Chan-Zuckerberg Biohub, San Francisco, CA, USA.; Department of Medicine, University of California, San Francisco, San Francisco, CA, USA.
المصدر: BioRxiv : the preprint server for biology [bioRxiv] 2022 Aug 02. Date of Electronic Publication: 2022 Aug 02.
نوع المنشور: Preprint
اللغة: English
بيانات الدورية: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE
مستخلص: As SARS-CoV-2 continues to spread worldwide, tractable primary airway cell models that accurately recapitulate the cell-intrinsic response to arising viral variants are needed. Here we describe an adult stem cell-derived human airway organoid model overexpressing the ACE2 receptor that supports robust viral replication while maintaining 3D architecture and cellular diversity of the airway epithelium. ACE2-OE organoids were infected with SARS-CoV-2 variants and subjected to single-cell RNA-sequencing. NF-κB inhibitor alpha was consistently upregulated in infected epithelial cells, and its mRNA expression positively correlated with infection levels. Confocal microscopy showed more IκBα expression in infected than bystander cells, but found concurrent nuclear translocation of NF-κB that IκBα usually prevents. Overexpressing a nondegradable IκBα mutant reduced NF-κB translocation and increased viral infection. These data demonstrate the functionality of ACE2-OE organoids in SARS-CoV-2 research and identify an incomplete NF-κB feedback loop as a rheostat of viral infection that may promote inflammation and severe disease.
التعليقات: Update in: Sci Rep. 2024 Jul 4;14(1):15351. doi: 10.1038/s41598-024-66003-2. (PMID: 38961189)
References: Dis Model Mech. 2021 Jun 1;14(6):. (PMID: 34219165)
Sci Transl Med. 2021 Apr 21;13(590):. (PMID: 33723017)
Front Immunol. 2020 Jun 16;11:1446. (PMID: 32612617)
Cell. 2020 Jul 23;182(2):429-446.e14. (PMID: 32526206)
Front Cell Infect Microbiol. 2022 Mar 14;12:841447. (PMID: 35360113)
J Virol. 2021 Nov 9;95(23):e0125721. (PMID: 34523966)
Cell Host Microbe. 2020 Jun 10;27(6):870-878. (PMID: 32464097)
Cell Stem Cell. 2020 Dec 3;27(6):859-868. (PMID: 33275899)
Nat Commun. 2021 Jul 16;12(1):4354. (PMID: 34272374)
Nature. 2021 Jan;589(7841):270-275. (PMID: 33116299)
Science. 2020 Jul 3;369(6499):50-54. (PMID: 32358202)
Mol Syst Biol. 2021 Jan;17(1):e9620. (PMID: 33491336)
J Virol. 2006 May;80(10):5059-64. (PMID: 16641297)
Nature. 2020 Nov;587(7835):619-625. (PMID: 33208946)
Nat Biotechnol. 2022 Feb;40(2):163-166. (PMID: 35132262)
Cell. 2021 Jun 24;184(13):3426-3437.e8. (PMID: 33991487)
Nature. 2021 Mar;591(7848):124-130. (PMID: 33494096)
Mol Cell Biol. 1996 Mar;16(3):1058-65. (PMID: 8622650)
Front Immunol. 2021 Nov 30;12:751778. (PMID: 34917076)
Nat Commun. 2021 Sep 21;12(1):5556. (PMID: 34548483)
Front Cell Dev Biol. 2020 Nov 05;8:574706. (PMID: 33224945)
Cell. 2021 Jan 7;184(1):106-119.e14. (PMID: 33333024)
Front Public Health. 2022 May 04;10:778037. (PMID: 35602161)
Nat Med. 2021 May;27(5):904-916. (PMID: 33879890)
Nat Protoc. 2016 Sep;11(9):1724-43. (PMID: 27560176)
Genome Biol. 2014;15(12):550. (PMID: 25516281)
EMBO J. 2019 Feb 15;38(4):. (PMID: 30643021)
Cell Stem Cell. 2020 Dec 3;27(6):890-904.e8. (PMID: 33128895)
Mod Pathol. 2020 Nov;33(11):2156-2168. (PMID: 32879413)
Nature. 2022 Mar;603(7902):706-714. (PMID: 35104837)
Genome Biol. 2018 Feb 6;19(1):15. (PMID: 29409532)
Nat Biotechnol. 2019 Jun;37(6):685-691. (PMID: 31061482)
Emerg Microbes Infect. 2022 Dec;11(1):926-937. (PMID: 35259078)
Elife. 2021 Aug 13;10:. (PMID: 34463615)
Nat Methods. 2018 Dec;15(12):1053-1058. (PMID: 30504886)
Nat Commun. 2023 Oct 6;14(1):6245. (PMID: 37803001)
Stem Cell Res Ther. 2022 Jan 10;13(1):9. (PMID: 35012650)
J Virol. 1999 May;73(5):4502-7. (PMID: 10196356)
Proc Natl Acad Sci U S A. 2018 Jun 26;115(26):6822-6827. (PMID: 29891677)
Bioinformatics. 2013 Jan 1;29(1):15-21. (PMID: 23104886)
Signal Transduct Target Ther. 2020 Sep 21;5(1):209. (PMID: 32958760)
Semin Immunol. 2014 Jun;26(3):253-66. (PMID: 24958609)
Cell. 2019 Jun 13;177(7):1888-1902.e21. (PMID: 31178118)
Nature. 2022 Feb;602(7898):556-557. (PMID: 35177843)
Curr Opin Virol. 2018 Apr;29:79-86. (PMID: 29656244)
Bioinformatics. 2020 Feb 1;36(3):964-965. (PMID: 31400197)
Nat Commun. 2019 Apr 3;10(1):1523. (PMID: 30944313)
Nat Rev Immunol. 2020 May;20(5):279-293. (PMID: 31853049)
Nature. 2020 Dec;588(7839):670-675. (PMID: 33238290)
Mucosal Immunol. 2021 Sep;14(5):978-990. (PMID: 33608655)
Cell Stem Cell. 2020 Dec 3;27(6):876-889.e12. (PMID: 33232663)
Proc Natl Acad Sci U S A. 2022 Apr 19;119(16):e2119680119. (PMID: 35353667)
معلومات مُعتمدة: P01 AI091580 United States AI NIAID NIH HHS; T32 AI060537 United States AI NIAID NIH HHS; U19 AI135990 United States AI NIAID NIH HHS
تواريخ الأحداث: Date Created: 20220819 Latest Revision: 20240715
رمز التحديث: 20240715
مُعرف محوري في PubMed: PMC9387123
DOI: 10.1101/2022.08.02.502100
PMID: 35982664
قاعدة البيانات: MEDLINE
الوصف
تدمد:2692-8205
DOI:10.1101/2022.08.02.502100