دورية أكاديمية

Nitrogen Fixation Activity and Genome Analysis of a Moderately Haloalkaliphilic Anoxygenic Phototrophic Bacterium Rhodovulum tesquicola .

التفاصيل البيبلوغرافية
العنوان: Nitrogen Fixation Activity and Genome Analysis of a Moderately Haloalkaliphilic Anoxygenic Phototrophic Bacterium Rhodovulum tesquicola .
المؤلفون: Komova AV; Kurchatov Centre for Genome Research, NRC Kurchatov Institute, 123098 Moscow, Russia., Bakhmutova ED; Kurchatov Centre for Genome Research, NRC Kurchatov Institute, 123098 Moscow, Russia., Izotova AO; Kurchatov Centre for Genome Research, NRC Kurchatov Institute, 123098 Moscow, Russia., Kochetova ES; Kurchatov Centre for Genome Research, NRC Kurchatov Institute, 123098 Moscow, Russia., Toshchakov SV; Kurchatov Centre for Genome Research, NRC Kurchatov Institute, 123098 Moscow, Russia., Namsaraev ZB; Kurchatov Centre for Genome Research, NRC Kurchatov Institute, 123098 Moscow, Russia., Golichenkov MV; Soil Biology Department, Soil Science Faculty, Moscow State University, 119991 Moscow, Russia.; Department of Biology, Faculty of Pediatrics, Pirogov Russian National Research Medical University, 117997 Moscow, Russia., Korzhenkov AA; Kurchatov Centre for Genome Research, NRC Kurchatov Institute, 123098 Moscow, Russia.
المصدر: Microorganisms [Microorganisms] 2022 Aug 09; Vol. 10 (8). Date of Electronic Publication: 2022 Aug 09.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: MDPI AG Country of Publication: Switzerland NLM ID: 101625893 Publication Model: Electronic Cited Medium: Print ISSN: 2076-2607 (Print) Linking ISSN: 20762607 NLM ISO Abbreviation: Microorganisms Subsets: PubMed not MEDLINE
أسماء مطبوعة: Original Publication: Basel, Switzerland : MDPI AG, [2013]-
مستخلص: The genome of the moderately haloalkaliphilic diazotrophic anoxygenic phototrophic bacterium Rhodovulum tesquicola A-36s T isolated from an alkaline lake was analyzed and compared to the genomes of the closest species Rhodovulum steppense A-20s T and Rhodovulum strictum DSM 11289 T . The genomic features of three organisms are quite similar, reflecting their ecological and physiological role of facultative photoheterotrophs. Nevertheless, the nitrogenase activity of the pure cultures of the studied bacteria differed significantly: the highest rate (4066 nmoles C 2 H 2 /mg of dry weight per hour) was demonstrated by Rhodovulum strictum while the rates in Rhodovulum tesquicola and Rhodovulum steppense were an order of magnitude lower (278 and 523 nmoles C 2 H 2 /mg of dry weight per hour, respectively). This difference can be attributed to the presence of an additional nitrogenase operon found exclusively in R. strictum and to the structural variation in nitrogenase operon in R. tesquicola .
References: Microorganisms. 2021 Aug 04;9(8):. (PMID: 34442741)
Mol Biol Evol. 2013 Apr;30(4):772-80. (PMID: 23329690)
Appl Environ Microbiol. 1990 Mar;56(3):614-22. (PMID: 16348136)
J Bacteriol. 1992 Oct;174(20):6590-9. (PMID: 1356967)
Mol Microbiol. 1993 May;8(4):673-84. (PMID: 8332060)
Microorganisms. 2020 Dec 26;9(1):. (PMID: 33375353)
J Bacteriol. 1984 Jan;157(1):73-8. (PMID: 6581158)
Appl Environ Microbiol. 2020 May 19;86(11):. (PMID: 32220835)
Int J Syst Evol Microbiol. 2012 Dec;62(Pt 12):2962-2966. (PMID: 22286907)
Genome Res. 2018 Jul;28(7):1079-1089. (PMID: 29773659)
Bioinformatics. 2018 Mar 15;34(6):1037-1039. (PMID: 29106469)
Genome Res. 2015 Jul;25(7):1043-55. (PMID: 25977477)
PLoS One. 2010 Mar 10;5(3):e9490. (PMID: 20224823)
FEMS Microbiol Ecol. 2019 Nov 1;95(11):. (PMID: 31712814)
J Biol Chem. 1999 Jul 9;274(28):19778-84. (PMID: 10391920)
Bioinformatics. 2012 Dec 1;28(23):3150-2. (PMID: 23060610)
BMC Bioinformatics. 2011 Apr 28;12:124. (PMID: 21526987)
J Bacteriol. 1978 Oct;136(1):267-79. (PMID: 361694)
Biosci Biotechnol Biochem. 2018 Jan;82(1):81-89. (PMID: 29297253)
J Bacteriol. 1969 Mar;97(3):1093-8. (PMID: 4887498)
Appl Microbiol Biotechnol. 2006 Nov;73(2):332-8. (PMID: 16733729)
Mikrobiologiia. 2014 Sep-Oct;83(5):583-98. (PMID: 25844470)
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. (PMID: 27342282)
Nat Commun. 2018 Nov 30;9(1):5114. (PMID: 30504855)
PLoS One. 2016 Aug 11;11(8):e0160981. (PMID: 27513570)
Microorganisms. 2020 Jan 22;8(2):. (PMID: 31979033)
Int J Syst Bacteriol. 1995 Apr;45(2):319-26. (PMID: 7537066)
J Bacteriol. 2002 Jun;184(11):3078-85. (PMID: 12003950)
Nucleic Acids Res. 2019 Jul 2;47(W1):W256-W259. (PMID: 30931475)
Nucleic Acids Res. 2017 Jan 4;45(D1):D353-D361. (PMID: 27899662)
Mol Biol Evol. 2004 Mar;21(3):541-54. (PMID: 14694078)
ISME J. 2021 Nov;15(11):3384-3398. (PMID: 34054125)
Nat Microbiol. 2021 Jan;6(1):3-6. (PMID: 33349678)
Appl Environ Microbiol. 2012 Sep;78(18):6619-29. (PMID: 22773649)
Nature. 1984 Jan 19-25;307(5948):289-92. (PMID: 6582352)
J Comput Biol. 2012 May;19(5):455-77. (PMID: 22506599)
Mol Gen Genet. 1985;201(3):363-9. (PMID: 3003541)
Appl Environ Microbiol. 2011 Nov;77(21):7551-9. (PMID: 21908636)
PLoS One. 2014 Nov 19;9(11):e112963. (PMID: 25409509)
J Biol Chem. 2000 Jun 9;275(23):17631-8. (PMID: 10837496)
Plant Physiol. 1968 Aug;43(8):1185-207. (PMID: 16656902)
Front Microbiol. 2011 Aug 01;2:165. (PMID: 21866228)
Life (Basel). 2014 Dec 11;4(4):944-67. (PMID: 25513762)
Metallomics. 2018 Apr 25;10(4):523-538. (PMID: 29629463)
Appl Environ Microbiol. 1997 Feb;63(2):420-6. (PMID: 16535506)
Arch Microbiol. 2001 Oct;176(4):243-54. (PMID: 11685368)
Extremophiles. 2018 Jul;22(4):651-663. (PMID: 29663079)
J Bacteriol. 2005 Nov;187(22):7784-94. (PMID: 16267302)
Life (Basel). 2021 Jul 19;11(7):. (PMID: 34357087)
Mikrobiologiia. 2009 Mar-Apr;78(2):281-8. (PMID: 19449744)
BMC Bioinformatics. 2009 Dec 15;10:421. (PMID: 20003500)
Bioinformatics. 2020 Apr 1;36(7):2251-2252. (PMID: 31742321)
فهرسة مساهمة: Keywords: Rhodovulum tesquicola; alkaliphiles; anoxygenic phototrophs; diazotroph; genome sequence; halophiles; nitrogen fixation
تواريخ الأحداث: Date Created: 20220826 Latest Revision: 20220830
رمز التحديث: 20221213
مُعرف محوري في PubMed: PMC9412634
DOI: 10.3390/microorganisms10081615
PMID: 36014033
قاعدة البيانات: MEDLINE
الوصف
تدمد:2076-2607
DOI:10.3390/microorganisms10081615