دورية أكاديمية

SARS-CoV-2 nsp14 Exoribonuclease Removes the Natural Antiviral 3'-Deoxy-3',4'-didehydro-cytidine Nucleotide from RNA.

التفاصيل البيبلوغرافية
العنوان: SARS-CoV-2 nsp14 Exoribonuclease Removes the Natural Antiviral 3'-Deoxy-3',4'-didehydro-cytidine Nucleotide from RNA.
المؤلفون: Moeller NH; Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, MN 55455, USA.; Institute for Molecular Virology, University of Minnesota, Minneapolis, MN 55455, USA.; Masonic Cancer Center, University of Minnesota, Minneapolis, MN 55455, USA., Passow KT; Department of Medicinal Chemistry, University of Minnesota, Minneapolis, MN 55455, USA., Harki DA; Institute for Molecular Virology, University of Minnesota, Minneapolis, MN 55455, USA.; Masonic Cancer Center, University of Minnesota, Minneapolis, MN 55455, USA.; Department of Medicinal Chemistry, University of Minnesota, Minneapolis, MN 55455, USA., Aihara H; Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, MN 55455, USA.; Institute for Molecular Virology, University of Minnesota, Minneapolis, MN 55455, USA.; Masonic Cancer Center, University of Minnesota, Minneapolis, MN 55455, USA.
المصدر: Viruses [Viruses] 2022 Aug 16; Vol. 14 (8). Date of Electronic Publication: 2022 Aug 16.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101509722 Publication Model: Electronic Cited Medium: Internet ISSN: 1999-4915 (Electronic) Linking ISSN: 19994915 NLM ISO Abbreviation: Viruses Subsets: MEDLINE
أسماء مطبوعة: Original Publication: Basel, Switzerland : MDPI
مواضيع طبية MeSH: COVID-19* , Exoribonucleases*/metabolism, Antiviral Agents/pharmacology ; Cytidine/pharmacology ; Humans ; Mutation ; Nucleotides ; RNA ; RNA, Viral/metabolism ; RNA-Dependent RNA Polymerase/genetics ; SARS-CoV-2 ; Viral Nonstructural Proteins/metabolism ; Virus Replication
مستخلص: The on-going global pandemic of COVID-19 is caused by SARS-CoV-2, which features a proofreading mechanism to facilitate the replication of its large RNA genome. The 3'-to-5' exoribonuclease (ExoN) activity of SARS-CoV-2 non-structural protein 14 (nsp14) removes nucleotides misincorporated during RNA synthesis by the low-fidelity viral RNA-dependent RNA polymerase (RdRp) and thereby compromises the efficacy of antiviral nucleoside/nucleotide analogues. Here we show biochemically that SARS-CoV-2 nsp14 can excise the natural antiviral chain-terminating nucleotide, 3'-deoxy-3',4'-didehydro-cytidine 5'-monophosphate (ddhCMP), incorporated by RdRp at the 3' end of an RNA strand. Nsp14 ExoN processes an RNA strand terminated with ddhCMP more efficiently than that with a non-physiological chain terminator 3'-deoxy-cytidine monophosphate (3'-dCMP), whereas RdRp is more susceptible to chain termination by 3'-dCTP than ddhCTP. These results suggest that nsp14 ExoN could play a role in protecting SARS-CoV-2 from ddhCTP, which is produced as part of the innate immune response against viral infections, and that the SARS-CoV-2 enzymes may have adapted to minimize the antiviral effect of ddhCTP.
References: Nucleic Acids Res. 2021 May 21;49(9):5382-5392. (PMID: 33956156)
Nat Struct Mol Biol. 2021 Sep;28(9):740-746. (PMID: 34381216)
J Biol Chem. 2020 Aug 14;295(33):11513-11528. (PMID: 32546482)
Nature. 2018 Jun;558(7711):610-614. (PMID: 29925952)
J Med Chem. 2021 Oct 28;64(20):15429-15439. (PMID: 34661397)
Proc Natl Acad Sci U S A. 2021 Jun 15;118(24):. (PMID: 34045361)
mBio. 2018 Mar 6;9(2):. (PMID: 29511076)
Med (N Y). 2022 Mar 11;3(3):204-215.e6. (PMID: 35128501)
Cell Rep. 2021 May 18;35(7):109126. (PMID: 33974846)
Cell Host Microbe. 2020 Jun 10;27(6):883-890.e2. (PMID: 32407669)
Nat Commun. 2020 Jul 30;11(1):3810. (PMID: 32733001)
Proc Natl Acad Sci U S A. 2014 Sep 16;111(37):E3900-9. (PMID: 25197083)
Proc Natl Acad Sci U S A. 2015 Jul 28;112(30):9436-41. (PMID: 26159422)
Curr Protoc. 2022 Mar;2(3):e376. (PMID: 35263029)
mBio. 2022 Jun 28;13(3):e0081522. (PMID: 35604092)
Nucleic Acids Res. 2010 Jan;38(1):203-14. (PMID: 19875418)
J Virol. 2019 Nov 26;93(24):. (PMID: 31578288)
J Biol Chem. 2021 Jul;297(1):100770. (PMID: 33989635)
PLoS Pathog. 2010 May 06;6(5):e1000896. (PMID: 20463816)
Cell Host Microbe. 2011 Dec 15;10(6):534-9. (PMID: 22177558)
Emerg Microbes Infect. 2020 Dec;9(1):1418-1428. (PMID: 32529952)
Elife. 2021 Oct 07;10:. (PMID: 34617885)
Proc Natl Acad Sci U S A. 2018 Jan 9;115(2):E162-E171. (PMID: 29279395)
Mol Cell. 2020 Sep 3;79(5):710-727. (PMID: 32853546)
Science. 2022 Feb 4;375(6580):497-498. (PMID: 35113690)
J Virol. 2016 May 12;90(11):5399-5414. (PMID: 27009949)
RNA Biol. 2011 Mar-Apr;8(2):270-9. (PMID: 21593585)
Science. 2021 Sep 03;373(6559):1142-1146. (PMID: 34315827)
Nature. 2020 Aug;584(7819):154-156. (PMID: 32438371)
J Virol. 2007 Nov;81(22):12135-44. (PMID: 17804504)
Proc Natl Acad Sci U S A. 2006 Mar 28;103(13):5108-13. (PMID: 16549795)
Antiviral Res. 2018 Jun;154:66-86. (PMID: 29649496)
Sci Transl Med. 2020 Apr 29;12(541):. (PMID: 32253226)
Proc Natl Acad Sci U S A. 2022 Mar 1;119(9):. (PMID: 35165203)
Nat Med. 2000 Dec;6(12):1375-9. (PMID: 11100123)
Nature. 2021 Jan;589(7840):120-124. (PMID: 32937646)
J Virol. 2020 Nov 9;94(23):. (PMID: 32938769)
Structure. 2022 Aug 4;30(8):1050-1054.e2. (PMID: 35609600)
PLoS One. 2013 Jul 10;8(7):e68347. (PMID: 23874596)
Sci Rep. 2017 Jun 30;7(1):4475. (PMID: 28667332)
معلومات مُعتمدة: P01 CA234228 United States CA NCI NIH HHS; R35 GM118047 United States GM NIGMS NIH HHS; U19 AI171954 United States AI NIAID NIH HHS; R35-GM118047 ; P01-CA234228 United States NH NIH HHS
فهرسة مساهمة: Keywords: RNA-dependent RNA polymerase; SARS-CoV-2; antiviral drug; chain terminator; ddhCTP; exoribonuclease; nsp14; nucleoside analogue; nucleotide; proofreading
المشرفين على المادة: 0 (Antiviral Agents)
0 (Nucleotides)
0 (RNA, Viral)
0 (Viral Nonstructural Proteins)
5CSZ8459RP (Cytidine)
63231-63-0 (RNA)
EC 2.1.1.56 (nsp14 protein, SARS coronavirus)
EC 2.7.7.48 (RNA-Dependent RNA Polymerase)
EC 3.1.- (Exoribonucleases)
تواريخ الأحداث: Date Created: 20220826 Date Completed: 20220829 Latest Revision: 20230603
رمز التحديث: 20230603
مُعرف محوري في PubMed: PMC9415739
DOI: 10.3390/v14081790
PMID: 36016411
قاعدة البيانات: MEDLINE
الوصف
تدمد:1999-4915
DOI:10.3390/v14081790