دورية أكاديمية
أعرض في EDS

A variable gene family encoding nodule-specific cysteine-rich peptides in pea ( Pisum sativum L.).

التفاصيل البيبلوغرافية
العنوان: A variable gene family encoding nodule-specific cysteine-rich peptides in pea ( Pisum sativum L.).
المؤلفون: Zorin EA; All-Russia Research Institute for Agricultural Microbiology, Saint Petersburg, Russia., Kliukova MS; All-Russia Research Institute for Agricultural Microbiology, Saint Petersburg, Russia., Afonin AM; All-Russia Research Institute for Agricultural Microbiology, Saint Petersburg, Russia., Gribchenko ES; All-Russia Research Institute for Agricultural Microbiology, Saint Petersburg, Russia., Gordon ML; All-Russia Research Institute for Agricultural Microbiology, Saint Petersburg, Russia., Sulima AS; All-Russia Research Institute for Agricultural Microbiology, Saint Petersburg, Russia., Zhernakov AI; All-Russia Research Institute for Agricultural Microbiology, Saint Petersburg, Russia., Kulaeva OA; All-Russia Research Institute for Agricultural Microbiology, Saint Petersburg, Russia., Romanyuk DA; All-Russia Research Institute for Agricultural Microbiology, Saint Petersburg, Russia., Kusakin PG; All-Russia Research Institute for Agricultural Microbiology, Saint Petersburg, Russia., Tsyganova AV; All-Russia Research Institute for Agricultural Microbiology, Saint Petersburg, Russia., Tsyganov VE; All-Russia Research Institute for Agricultural Microbiology, Saint Petersburg, Russia., Tikhonovich IA; All-Russia Research Institute for Agricultural Microbiology, Saint Petersburg, Russia.; Department of Genetics and Biotechnology, Faculty of Biology, Saint Petersburg State University, Saint Petersburg, Russia., Zhukov VA; All-Russia Research Institute for Agricultural Microbiology, Saint Petersburg, Russia.
المصدر: Frontiers in plant science [Front Plant Sci] 2022 Sep 14; Vol. 13, pp. 884726. Date of Electronic Publication: 2022 Sep 14 (Print Publication: 2022).
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Frontiers Research Foundation Country of Publication: Switzerland NLM ID: 101568200 Publication Model: eCollection Cited Medium: Print ISSN: 1664-462X (Print) Linking ISSN: 1664462X NLM ISO Abbreviation: Front Plant Sci Subsets: PubMed not MEDLINE
أسماء مطبوعة: Original Publication: Lausanne : Frontiers Research Foundation, 2010-
مستخلص: Various legume plants form root nodules in which symbiotic bacteria (rhizobia) fix atmospheric nitrogen after differentiation into a symbiotic form named bacteroids. In some legume species, bacteroid differentiation is promoted by defensin-like nodule-specific cysteine-rich (NCR) peptides. NCR peptides have best been studied in the model legume Medicago truncatula Gaertn., while in many other legumes relevant information is still fragmentary. Here, we characterize the NCR gene family in pea ( Pisum sativum L.) using genomic and transcriptomic data. We found 360 genes encoding NCR peptides that are expressed in nodules. The sequences of pea NCR genes and putative peptides are highly variable and differ significantly from NCR sequences of M. truncatula . Indeed, only one pair of orthologs ( PsNCR47 - MtNCR312 ) has been identified. The NCR genes in the pea genome are located in clusters, and the expression patterns of NCR genes from one cluster tend to be similar. These data support the idea of independent evolution of NCR genes by duplication and diversification in related legume species. We also described spatiotemporal expression profiles of NCRs and identified specific transcription factor (TF) binding sites in promoters of "early" and "late" NCR genes. Further, we studied the expression of NCR genes in nodules of Fix - mutants and predicted potential regulators of NCR gene expression, one among them being the TF ERN1 involved in the early steps of nodule organogenesis. In general, this study contributes to understanding the functions of NCRs in legume nodules and contributes to understanding the diversity and potential antibiotic properties of pea nodule-specific antimicrobial molecules.
Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
(Copyright © 2022 Zorin, Kliukova, Afonin, Gribchenko, Gordon, Sulima, Zhernakov, Kulaeva, Romanyuk, Kusakin, Tsyganova, Tsyganov, Tikhonovich and Zhukov.)
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فهرسة مساهمة: Keywords: NCR peptides; Pisum sativum L.; nitrogen-fixing symbiosis; prediction of antimicrobial properties; root nodules; spatiotemporal expression pattern; transcriptomics
تواريخ الأحداث: Date Created: 20221003 Latest Revision: 20221004
رمز التحديث: 20231215
مُعرف محوري في PubMed: PMC9515463
DOI: 10.3389/fpls.2022.884726
PMID: 36186063
قاعدة البيانات: MEDLINE
الوصف
تدمد:1664-462X
DOI:10.3389/fpls.2022.884726