دورية أكاديمية

Identification and Characterization of Small RNA Markers of Age in the Blow Fly Cochliomyia macellaria (Fabricius) (Diptera: Calliphoridae).

التفاصيل البيبلوغرافية
العنوان: Identification and Characterization of Small RNA Markers of Age in the Blow Fly Cochliomyia macellaria (Fabricius) (Diptera: Calliphoridae).
المؤلفون: Hjelmen CE; Department of Biology, Utah Valley University, Orem, UT 84058, USA.; Department of Entomology, Texas A&M University, College Station, TX 77843, USA., Yuan Y; Department of Computer Science and Engineering, Texas A&M University, College Station, TX 77843, USA., Parrott JJ; Department of Entomology, Texas A&M University, College Station, TX 77843, USA.; School of Mathematical and Natural Sciences, Arizona State University, Glendale, AZ 85306, USA., McGuane AS; Department of Entomology, Texas A&M University, College Station, TX 77843, USA., Srivastav SP; Department of Entomology, Texas A&M University, College Station, TX 77843, USA.; Department of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, USA., Purcell AC; Centre for Forensic Science, Department of Pure and Applied Chemistry, University of Strathclyde, Glasgow G1 1XQ, UK., Pimsler ML; Department of Entomology, Texas A&M University, College Station, TX 77843, USA., Sze SH; Department of Computer Science and Engineering, Texas A&M University, College Station, TX 77843, USA.; Department of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843, USA., Tarone AM; Department of Entomology, Texas A&M University, College Station, TX 77843, USA.
المصدر: Insects [Insects] 2022 Oct 18; Vol. 13 (10). Date of Electronic Publication: 2022 Oct 18.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: MDPI AG Country of Publication: Switzerland NLM ID: 101574235 Publication Model: Electronic Cited Medium: Print ISSN: 2075-4450 (Print) Linking ISSN: 20754450 NLM ISO Abbreviation: Insects Subsets: PubMed not MEDLINE
أسماء مطبوعة: Original Publication: Basel, Switzerland : MDPI AG, [2010]-
مستخلص: Blow fly development is important in decomposition ecology, agriculture, and forensics. Much of the impact of these species is from immature samples, thus knowledge of their development is important to enhance or ameliorate their effects. One application of this information is the estimation of immature insect age to provide temporal information for death investigations. While traditional markers of age such as stage and size are generally accurate, they lack precision in later developmental stages. We used miRNA sequencing to measure miRNA expression, throughout development, of the secondary screwworm, Cochliomyia macellaria (Fabricius) (Diptera: Calliphoridae) and identified 217 miRNAs present across the samples. Ten were identified to be significantly differentially expressed in larval samples and seventeen were found to be significantly differentially expressed in intrapuparial samples. Twenty-eight miRNAs were identified to be differentially expressed between sexes. Expression patterns of two miRNAs, miR-92b and bantam , were qPCR-validated in intrapuparial samples; these and likely food-derived miRNAs appear to be stable markers of age in C. macellaria . Our results support the use of miRNAs for developmental markers of age and suggest further investigations across species and under a range of abiotic and biotic conditions.
References: Nucleic Acids Res. 2019 Jan 8;47(D1):D155-D162. (PMID: 30423142)
Proc Natl Acad Sci U S A. 2005 Dec 13;102(50):18017-22. (PMID: 16330759)
Cell Rep. 2014 Jul 24;8(2):528-41. (PMID: 25017064)
J Econ Entomol. 2007 Feb;100(1):131-5. (PMID: 17370820)
Forensic Sci Int. 2012 Jul 10;220(1-3):251-64. (PMID: 22497703)
Nucleic Acids Res. 2011 Jan;39(Database issue):D152-7. (PMID: 21037258)
Nucleic Acids Res. 2019 Jan 8;47(D1):D759-D765. (PMID: 30364959)
Annu Rev Entomol. 2011;56:401-21. (PMID: 20822449)
Development. 2012 Oct;139(19):3543-52. (PMID: 22899845)
Forensic Sci Int. 2014 Sep;242:157-161. (PMID: 25064575)
Genome Biol. 2002 Jun 18;3(7):RESEARCH0034. (PMID: 12184808)
Clin Chem. 2010 Jun;56(6):998-1006. (PMID: 20378769)
J Med Entomol. 2013 Jul;50(4):925-30. (PMID: 23926794)
J Med Entomol. 2016 Nov;53(6):1249-1251. (PMID: 27524822)
Nucleic Acids Res. 2014 Jan;42(Database issue):D68-73. (PMID: 24275495)
J Forensic Sci. 2000 Jul;45(4):824-32. (PMID: 10914578)
Cell. 2003 Apr 4;113(1):25-36. (PMID: 12679032)
J Econ Entomol. 1983 Oct;76(5):1106-11. (PMID: 6630712)
Cell. 2012 Jan 20;148(1-2):46-57. (PMID: 22265401)
Nature. 2003 Jul 10;424(6945):147-51. (PMID: 12853946)
Mol Ecol. 2015 Oct;24(19):4826-47. (PMID: 26308242)
Nucleic Acids Res. 2004 Jan 1;32(Database issue):D109-11. (PMID: 14681370)
PLoS One. 2013 Jul 23;8(7):e69439. (PMID: 23936017)
Insect Mol Biol. 2012 Apr;21(2):205-21. (PMID: 22283785)
Dev Biol. 2007 Oct 1;310(1):35-43. (PMID: 17714701)
Genome Biol. 2014;15(12):550. (PMID: 25516281)
RNA Biol. 2013 Jun;10(6):1042-56. (PMID: 23669073)
J Forensic Sci. 2013 Jan;58(1):79-84. (PMID: 22621310)
BMC Res Notes. 2015 Apr 22;8:164. (PMID: 25899823)
Sci Rep. 2017 Nov 24;7(1):16324. (PMID: 29176730)
Cell. 2007 Oct 5;131(1):136-45. (PMID: 17923093)
Am J Forensic Med Pathol. 2005 Jun;26(2):161-5. (PMID: 15894851)
J Forensic Sci. 2011 Nov;56(6):1464-70. (PMID: 21827476)
BMC Genomics. 2008 Feb 19;9:83. (PMID: 18284684)
Crit Rev Eukaryot Gene Expr. 1991;1(2):99-126. (PMID: 1802106)
Curr Biol. 2003 Apr 29;13(9):790-5. (PMID: 12725740)
J Med Entomol. 2017 Sep 1;54(5):1109-1115. (PMID: 28874020)
Neurobiol Aging. 1991 Nov-Dec;12(6):685-93. (PMID: 1791906)
Nucleic Acids Res. 2016 Jan 4;44(D1):D786-92. (PMID: 26467478)
J Forensic Sci. 2002 Sep;47(5):1055-9. (PMID: 12353545)
Nucleic Acids Res. 2008 Jan;36(Database issue):D154-8. (PMID: 17991681)
Nat Protoc. 2008;3(6):1101-8. (PMID: 18546601)
Annu Rev Entomol. 2000;45:55-81. (PMID: 10761570)
Int J Legal Med. 2013 Jan;127(1):243-9. (PMID: 22555870)
Int J Parasitol. 2003 Sep 15;33(10):1105-13. (PMID: 13129533)
J Med Entomol. 2006 Sep;43(5):1023-33. (PMID: 17017243)
Forensic Sci Med Pathol. 2011 Dec;7(4):379-92. (PMID: 21213072)
Genetics. 2002 Aug;161(4):1527-37. (PMID: 12196398)
Bioessays. 2000 Mar;22(3):235-44. (PMID: 10684583)
Annu Rev Biochem. 2010;79:351-79. (PMID: 20533884)
Int J Legal Med. 2014 Jul;128(4):709-17. (PMID: 24811885)
Dev Biol. 2002 Dec 1;252(1):31-45. (PMID: 12453458)
PLoS One. 2013;8(2):e56303. (PMID: 23409170)
Int J Legal Med. 2015 Jul;129(4):835-50. (PMID: 25209716)
Genes (Basel). 2020 Feb 19;11(2):. (PMID: 32093067)
J Forensic Sci. 2020 Sep;65(5):1579-1587. (PMID: 32501598)
Cell Res. 2008 Oct;18(10):997-1006. (PMID: 18766170)
Genes Dev. 2014 Nov 1;28(21):2421-31. (PMID: 25367037)
J Forensic Sci. 2011 Jan;56 Suppl 1:S112-22. (PMID: 21155802)
Methods Enzymol. 1991;194:415-23. (PMID: 2005800)
Forensic Sci Int. 2010 Dec 15;203(1-3):106-11. (PMID: 20674199)
Int J Legal Med. 2017 Jan;131(1):263-274. (PMID: 27766412)
Sci Rep. 2019 Dec 30;9(1):20365. (PMID: 31889104)
PLoS One. 2015 Mar 24;10(3):e0122203. (PMID: 25803701)
PeerJ. 2016 Jul 05;4:e2076. (PMID: 27441107)
J Forensic Sci. 2008 Jul;53(4):942-8. (PMID: 18503527)
J Forensic Sci. 2007 Nov;52(6):1350-4. (PMID: 18093065)
Proc Natl Acad Sci U S A. 2008 Jul 29;105(30):10513-8. (PMID: 18663219)
Insect Mol Biol. 2017 Feb;26(1):46-57. (PMID: 27775856)
Cell. 2011 Mar 18;144(6):970-85. (PMID: 21414487)
Science. 2006 Feb 10;311(5762):796-800. (PMID: 16469913)
Genome Biol. 2003;5(1):R1. (PMID: 14709173)
Annu Rev Genomics Hum Genet. 2015;16:103-31. (PMID: 26079281)
Cell. 2008 Jul 11;134(1):25-36. (PMID: 18614008)
Clin Chim Acta. 2013 Jan 16;415:239-44. (PMID: 23153516)
Science. 2002 Sep 20;297(5589):2056-60. (PMID: 12154197)
J Med Entomol. 2010 Sep;47(5):917-23. (PMID: 20939391)
Nature. 2000 Mar 23;404(6776):394-8. (PMID: 10746727)
معلومات مُعتمدة: 2015-DN-BX-K020 National Institute of Justice
فهرسة مساهمة: Keywords: Calliphoridae; carrion ecology; development; forensic entomology; miRNA
تواريخ الأحداث: Date Created: 20221027 Latest Revision: 20221030
رمز التحديث: 20231215
مُعرف محوري في PubMed: PMC9603907
DOI: 10.3390/insects13100948
PMID: 36292896
قاعدة البيانات: MEDLINE
الوصف
تدمد:2075-4450
DOI:10.3390/insects13100948