دورية أكاديمية

Phototank setup and focus stack imaging method for reptile and amphibian specimens (Amphibia, Reptilia).

التفاصيل البيبلوغرافية
العنوان: Phototank setup and focus stack imaging method for reptile and amphibian specimens (Amphibia, Reptilia).
المؤلفون: Braker EM; Vertebrate Zoology, University of Colorado Museum of Natural History, UCB 265, Boulder CO 80309, USA University of Colorado Museum of Natural History Boulder United States of America.
المصدر: ZooKeys [Zookeys] 2022 Dec 09; Vol. 1134, pp. 185-210. Date of Electronic Publication: 2022 Dec 09 (Print Publication: 2022).
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Pensoft Publishers Country of Publication: Bulgaria NLM ID: 101497933 Publication Model: eCollection Cited Medium: Print ISSN: 1313-2989 (Print) Linking ISSN: 13132970 NLM ISO Abbreviation: Zookeys Subsets: PubMed not MEDLINE
أسماء مطبوعة: Original Publication: Sofia, Bulgaria : Pensoft Publishers
مستخلص: Fluid-preserved reptile and amphibian specimens are challenging to photograph with traditional methods due to their complex three-dimensional forms and reflective surfaces when removed from solution. An effective approach to counteract these issues involves combining focus stack photography with the use of a photo immersion tank. Imaging specimens beneath a layer of preservative fluid eliminates glare and risk of specimen desiccation, while focus stacking produces sharp detail through merging multiple photographs taken at successive focal steps to create a composite image with an extended depth of field. This paper describes the wet imaging components and focus stack photography workflow developed while conducting a large-scale digitization project for targeted reptile and amphibian specimens housed in the University of Colorado Museum of Natural History Herpetology Collection. This methodology can be implemented in other collections settings and adapted for use with fluid-preserved specimen types across the Tree of Life to generate high-quality, taxonomically informative images for use in documenting biodiversity, remote examination of fine traits, inclusion in publications, and educational applications.
(Emily M. Braker.)
References: PLoS One. 2020 Aug 13;15(8):e0236417. (PMID: 32790700)
Science. 2013 Jul 19;341(6143):292-5. (PMID: 23869019)
Bioscience. 2020 Feb 1;70(2):119-121. (PMID: 32063647)
Zookeys. 2012;(209):7-17. (PMID: 22859875)
Zootaxa. 2019 Feb 08;4554(1):141-172. (PMID: 30790982)
Biol Direct. 2010 Jul 06;5:45. (PMID: 20604956)
Bioscience. 2020 Jan 1;70(1):23-30. (PMID: 31949317)
Zookeys. 2015 Apr 06;(494):133-54. (PMID: 25901117)
Zookeys. 2012;(209):19-45. (PMID: 22859876)
Zookeys. 2017 Oct 31;(712):141-154. (PMID: 29134038)
Zookeys. 2014 Dec 16;(464):1-23. (PMID: 25589866)
Zookeys. 2012;(209):133-46. (PMID: 22859884)
Front Artif Intell. 2021 Apr 20;4:582110. (PMID: 33959704)
Sci Data. 2020 Jun 5;7(1):171. (PMID: 32504009)
Philos Trans R Soc Lond B Biol Sci. 2018 Nov 19;374(1763):. (PMID: 30455209)
Sci Eng Ethics. 2010 Dec;16(4):639-67. (PMID: 20567932)
PLoS One. 2019 Sep 11;14(9):e0215794. (PMID: 31509534)
Curr Biol. 2015 Oct 5;25(19):R922-9. (PMID: 26439355)
فهرسة مساهمة: Keywords: Helicon Focus; digitization; focus stack photography; herpetology collections; imaging; phototank
تواريخ الأحداث: Date Created: 20230210 Latest Revision: 20230211
رمز التحديث: 20230211
مُعرف محوري في PubMed: PMC9836466
DOI: 10.3897/zookeys.1134.96103
PMID: 36761107
قاعدة البيانات: MEDLINE
الوصف
تدمد:1313-2989
DOI:10.3897/zookeys.1134.96103