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Maps of Constitutive-Heterochromatin Distribution for Four Martes Species (Mustelidae, Carnivora, Mammalia) Show the Formative Role of Macrosatellite Repeats in Interspecific Variation of Chromosome Structure.

التفاصيل البيبلوغرافية
العنوان: Maps of Constitutive-Heterochromatin Distribution for Four Martes Species (Mustelidae, Carnivora, Mammalia) Show the Formative Role of Macrosatellite Repeats in Interspecific Variation of Chromosome Structure.
المؤلفون: Beklemisheva VR; Department of Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology, Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia., Lemskaya NA; Department of Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology, Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia., Prokopov DY; Department of Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology, Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia., Perelman PL; Department of Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology, Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia., Romanenko SA; Department of Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology, Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia., Proskuryakova AA; Department of Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology, Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia., Serdyukova NA; Department of Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology, Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia., Utkin YA; Department of Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology, Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia., Nie W; State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650223, China., Ferguson-Smith MA; Cambridge Resource Centre for Comparative Genomics, Department of Veterinary Medicine, University of Cambridge, Cambridge CB3 0ES, UK., Yang F; School of Life Sciences and Medicine, Shandong University of Technology, Zibo 255049, China., Graphodatsky AS; Department of Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology, Siberian Branch of Russian Academy of Sciences, Novosibirsk 630090, Russia.
المصدر: Genes [Genes (Basel)] 2023 Feb 14; Vol. 14 (2). Date of Electronic Publication: 2023 Feb 14.
نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't
اللغة: English
بيانات الدورية: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101551097 Publication Model: Electronic Cited Medium: Internet ISSN: 2073-4425 (Electronic) Linking ISSN: 20734425 NLM ISO Abbreviation: Genes (Basel) Subsets: MEDLINE
أسماء مطبوعة: Original Publication: Basel : MDPI
مواضيع طبية MeSH: Mustelidae*/genetics , Carnivora*/genetics, Animals ; Heterochromatin ; In Situ Hybridization, Fluorescence ; Euchromatin ; Chromosome Structures
مستخلص: Constitutive-heterochromatin placement in the genome affects chromosome structure by occupying centromeric areas and forming large blocks. To investigate the basis for heterochromatin variation in the genome, we chose a group of species with a conserved euchromatin part: the genus Martes [stone marten ( M. foina, 2n = 38), sable ( M. zibellina , 2n = 38 ) , pine marten ( M. martes, 2n = 38), and yellow-throated marten ( M. flavigula , 2n = 40)]. We mined the stone marten genome for the most abundant tandem repeats and selected the top 11 macrosatellite repetitive sequences. Fluorescent in situ hybridization revealed distributions of the tandemly repeated sequences (macrosatellites, telomeric repeats, and ribosomal DNA). We next characterized the AT/GC content of constitutive heterochromatin by CDAG (Chromomycin A3-DAPI-after G-banding). The euchromatin conservatism was shown by comparative chromosome painting with stone marten probes in newly built maps of the sable and pine marten. Thus, for the four Martes species, we mapped three different types of tandemly repeated sequences critical for chromosome structure. Most macrosatellites are shared by the four species with individual patterns of amplification. Some macrosatellites are specific to a species, autosomes, or the X chromosome. The variation of core macrosatellites and their prevalence in a genome are responsible for the species-specific variation of the heterochromatic blocks.
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فهرسة مساهمة: Keywords: CDAG staining; fluorescence in situ hybridization; macrosatellite DNA; pine marten; rDNA probe; sable; stone marten; tandemly arranged sequences; telomere repeat; yellow-throated marten
المشرفين على المادة: 0 (Heterochromatin)
0 (Euchromatin)
تواريخ الأحداث: Date Created: 20230225 Date Completed: 20230228 Latest Revision: 20231117
رمز التحديث: 20231215
مُعرف محوري في PubMed: PMC9957230
DOI: 10.3390/genes14020489
PMID: 36833416
قاعدة البيانات: MEDLINE
الوصف
تدمد:2073-4425
DOI:10.3390/genes14020489