دورية أكاديمية

RNA-sequencing transcriptome analysis of Avicennia marina (Forsk.) Vierh. leaf epidermis defines tissue-specific transcriptional response to salinity treatment.

التفاصيل البيبلوغرافية
العنوان: RNA-sequencing transcriptome analysis of Avicennia marina (Forsk.) Vierh. leaf epidermis defines tissue-specific transcriptional response to salinity treatment.
المؤلفون: Li H; College of Food and Bio-Engineering, Bengbu University, Bengbu, Anhui, 233030, People's Republic of China., Lv CT; College of Food and Bio-Engineering, Bengbu University, Bengbu, Anhui, 233030, People's Republic of China., Li YT; College of Food and Bio-Engineering, Bengbu University, Bengbu, Anhui, 233030, People's Republic of China., Gao GY; College of Food and Bio-Engineering, Bengbu University, Bengbu, Anhui, 233030, People's Republic of China., Meng YF; College of Food and Bio-Engineering, Bengbu University, Bengbu, Anhui, 233030, People's Republic of China., You YL; College of Food and Bio-Engineering, Bengbu University, Bengbu, Anhui, 233030, People's Republic of China., Tian Q; College of Food and Bio-Engineering, Bengbu University, Bengbu, Anhui, 233030, People's Republic of China., Liang KQ; College of Food and Bio-Engineering, Bengbu University, Bengbu, Anhui, 233030, People's Republic of China., Chen Y; College of Food and Bio-Engineering, Bengbu University, Bengbu, Anhui, 233030, People's Republic of China., Chen H; College of Food and Bio-Engineering, Bengbu University, Bengbu, Anhui, 233030, People's Republic of China., Xia C; College of Food and Bio-Engineering, Bengbu University, Bengbu, Anhui, 233030, People's Republic of China., Rui XY; College of Food and Bio-Engineering, Bengbu University, Bengbu, Anhui, 233030, People's Republic of China. 965347604@qq.com., Zheng HL; Key Laboratory for Subtropical Wetland Ecosystem Research of MOE, College of the Environment and Ecology, Xiamen University, Xiamen, Fujian, 361005, People's Republic of China. zhenghl@xmu.edu.cn., Wei MY; School of Ecology, Resources and Environment, Dezhou University, DeZhou, Shandong, 253000, People's Republic of China. weimingyue@stu.xmu.edu.cn.
المصدر: Scientific reports [Sci Rep] 2023 May 10; Vol. 13 (1), pp. 7614. Date of Electronic Publication: 2023 May 10.
نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't
اللغة: English
بيانات الدورية: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE
أسماء مطبوعة: Original Publication: London : Nature Publishing Group, copyright 2011-
مواضيع طبية MeSH: Avicennia*/metabolism, Animals ; Transcriptome ; Salinity ; Sodium Chloride/pharmacology ; Sodium Chloride/metabolism ; Gene Expression Profiling ; Epidermis ; Plant Leaves/genetics ; RNA/metabolism
مستخلص: Avicennia marina (Forsk.) Vierh. is a typical mangrove plant. Its epidermis contains salt glands, which can secrete excess salts onto the leaf surfaces, improving the salt tolerance of the plants. However, knowledge on the epidermis-specific transcriptional responses of A. marina to salinity treatment is lacking. Thus, physiological and transcriptomic techniques were applied to unravel the salt tolerance mechanism of A. marina. Our results showed that 400 mM NaCl significantly reduced the plant height, leaf area, leaf biomass and photosynthesis of A. marina. In addition, 1565 differentially expressed genes were identified, of which 634 and 931 were up- and down-regulated. Based on Kyoto Encyclopedia of Genes and Genomes metabolic pathway enrichment analysis, we demonstrated that decreased gene expression, especially that of OEE1, PQL2, FDX3, ATPC, GAPDH, PRK, FBP and RPE, could explain the inhibited photosynthesis caused by salt treatment. Furthermore, the ability of A. marina to cope with 400 mM NaCl treatment was dependent on appropriate hormone signalling and potential sulfur-containing metabolites, such as hydrogen sulfide and cysteine biosynthesis. Overall, the present study provides a theoretical basis for the adaption of A. marina to saline habitats and a reference for studying the salt tolerance mechanism of other mangrove plants.
(© 2023. The Author(s).)
References: Vitam Horm. 2005;72:289-338. (PMID: 16492475)
Nucleic Acids Res. 2023 Jan 6;51(D1):D587-D592. (PMID: 36300620)
Front Plant Sci. 2018 Sep 11;9:1307. (PMID: 30254657)
Mitochondrial DNA B Resour. 2020 May 20;5(3):2131-2132. (PMID: 33366945)
Planta. 2022 Jun 9;256(1):6. (PMID: 35678934)
Tree Physiol. 2021 Sep 10;41(9):1749-1766. (PMID: 33580961)
Plant Cell Environ. 2002 Feb;25(2):239-250. (PMID: 11841667)
Nitric Oxide. 2021 Jun 1;111-112:14-30. (PMID: 33839259)
Plant Cell Environ. 2014 Jul;37(7):1656-71. (PMID: 24417377)
Mar Genomics. 2015 Oct;23:33-6. (PMID: 25899405)
Tree Physiol. 2010 Dec;30(12):1570-85. (PMID: 21030403)
Plant Physiol. 1999 Feb;119(2):481-8. (PMID: 9952443)
Plant Cell Environ. 2016 Nov;39(11):2486-2497. (PMID: 27434802)
Nat Biotechnol. 2010 May;28(5):511-5. (PMID: 20436464)
Plant Cell. 2003 Feb;15(2):533-43. (PMID: 12566590)
Genome Biol. 2014;15(12):550. (PMID: 25516281)
Trends Plant Sci. 2005 Oct;10(10):503-9. (PMID: 16143557)
Proc Natl Acad Sci U S A. 2004 Feb 3;101(5):1409-14. (PMID: 14736920)
Science. 2006 Jan 6;311(5757):91-4. (PMID: 16400150)
Genome Biol. 2010;11(2):R14. (PMID: 20132535)
BMC Genomics. 2015 Aug 14;16:605. (PMID: 26272068)
Curr Protein Pept Sci. 2015;16(5):395-405. (PMID: 25824387)
Tree Physiol. 2012 Nov;32(11):1378-88. (PMID: 23100256)
Plant J. 2010 Dec;64(5):753-63. (PMID: 21105923)
Plant Cell Environ. 2011 Oct;34(10):1678-92. (PMID: 21631530)
PLoS One. 2014 Sep 29;9(9):e108785. (PMID: 25265387)
Plant Cell Environ. 2022 Jun;45(6):1698-1718. (PMID: 35141923)
Bot Stud. 2014 Dec;55(1):57. (PMID: 28510976)
Tree Physiol. 2022 Sep 8;42(9):1812-1826. (PMID: 35412618)
Plant Cell Physiol. 2019 Nov 1;60(11):2549-2563. (PMID: 31359043)
Tree Physiol. 2018 Nov 1;38(11):1605-1622. (PMID: 29917117)
Bot Stud. 2019 Aug 9;60(1):16. (PMID: 31399930)
Int J Mol Sci. 2019 Dec 23;21(1):. (PMID: 31878013)
J Plant Physiol. 2004 May;161(5):531-42. (PMID: 15202709)
Plant Cell Physiol. 2010 Jun;51(6):866-76. (PMID: 20430763)
Gene. 2000 Aug 8;253(2):237-47. (PMID: 10940562)
Plant Mol Biol. 2008 Apr;66(6):675-83. (PMID: 18236009)
Bioinformatics. 2005 Oct 1;21(19):3787-93. (PMID: 15817693)
Protein Sci. 2019 Nov;28(11):1947-1951. (PMID: 31441146)
Nucleic Acids Res. 2000 Jan 1;28(1):27-30. (PMID: 10592173)
J Biol Chem. 2002 May 24;277(21):18373-82. (PMID: 11907031)
Mar Genomics. 2011 Jun;4(2):129-36. (PMID: 21620334)
Plant Cell Physiol. 2000 Nov;41(11):1279-85. (PMID: 11092914)
Plant Mol Biol. 2019 Jun;100(3):303-317. (PMID: 30945147)
المشرفين على المادة: 451W47IQ8X (Sodium Chloride)
63231-63-0 (RNA)
تواريخ الأحداث: Date Created: 20230510 Date Completed: 20230512 Latest Revision: 20230601
رمز التحديث: 20230602
مُعرف محوري في PubMed: PMC10172313
DOI: 10.1038/s41598-023-34095-x
PMID: 37165000
قاعدة البيانات: MEDLINE
الوصف
تدمد:2045-2322
DOI:10.1038/s41598-023-34095-x