دورية أكاديمية
أعرض في EDS

Genomic epidemiology of SARS-CoV-2 in Russia reveals recurring cross-border transmission throughout 2020.

التفاصيل البيبلوغرافية
العنوان: Genomic epidemiology of SARS-CoV-2 in Russia reveals recurring cross-border transmission throughout 2020.
المؤلفون: Matsvay A; Federal State Budgetary Institution 'Centre for Strategic Planning and Management of Biomedical Health Risks' of the Federal Medical Biological Agency, Moscow, Russia., Klink GV; A.A. Kharkevich Institute for Information Transmission Problems of the Russian Academy of Sciences, Moscow, Russia., Safina KR; Skolkovo Institute of Science and Technology (Skoltech), Moscow, Russia., Nabieva E; Skolkovo Institute of Science and Technology (Skoltech), Moscow, Russia., Garushyants SK; A.A. Kharkevich Institute for Information Transmission Problems of the Russian Academy of Sciences, Moscow, Russia., Biba D; Skolkovo Institute of Science and Technology (Skoltech), Moscow, Russia., Bazykin GA; A.A. Kharkevich Institute for Information Transmission Problems of the Russian Academy of Sciences, Moscow, Russia.; Skolkovo Institute of Science and Technology (Skoltech), Moscow, Russia., Mikhaylov IM; Federal State Budgetary Institution 'Centre for Strategic Planning and Management of Biomedical Health Risks' of the Federal Medical Biological Agency, Moscow, Russia., Say AV; Federal State Budgetary Institution 'Centre for Strategic Planning and Management of Biomedical Health Risks' of the Federal Medical Biological Agency, Moscow, Russia., Zakamornaya AI; Federal State Budgetary Institution 'Centre for Strategic Planning and Management of Biomedical Health Risks' of the Federal Medical Biological Agency, Moscow, Russia., Khakhina AO; Federal State Budgetary Institution 'Centre for Strategic Planning and Management of Biomedical Health Risks' of the Federal Medical Biological Agency, Moscow, Russia., Lisitsa TS; Federal State Budgetary Institution 'Centre for Strategic Planning and Management of Biomedical Health Risks' of the Federal Medical Biological Agency, Moscow, Russia., Ayginin AA; Federal State Budgetary Institution 'Centre for Strategic Planning and Management of Biomedical Health Risks' of the Federal Medical Biological Agency, Moscow, Russia., Abramov IS; Federal State Budgetary Institution 'Centre for Strategic Planning and Management of Biomedical Health Risks' of the Federal Medical Biological Agency, Moscow, Russia., Bogdan SA; Chief Federal State Budgetary Healthcare Institution 'Centre of Hygiene and Epidemiology' of the Federal Medical Biological Agency, Moscow, Russia., Kolbutova KB; Chief Federal State Budgetary Healthcare Institution 'Centre of Hygiene and Epidemiology' of the Federal Medical Biological Agency, Moscow, Russia., Oleynikova DU; Chief Federal State Budgetary Healthcare Institution 'Centre of Hygiene and Epidemiology' of the Federal Medical Biological Agency, Moscow, Russia., Avdeenko TF; Chief Federal State Budgetary Healthcare Institution 'Centre of Hygiene and Epidemiology' of the Federal Medical Biological Agency, Moscow, Russia., Shipulin GA; Federal State Budgetary Institution 'Centre for Strategic Planning and Management of Biomedical Health Risks' of the Federal Medical Biological Agency, Moscow, Russia., Yudin SM; Federal State Budgetary Institution 'Centre for Strategic Planning and Management of Biomedical Health Risks' of the Federal Medical Biological Agency, Moscow, Russia., Skvortsova VI; Federal Medical Biological Agency, Moscow, Russia.
المصدر: PloS one [PLoS One] 2023 May 16; Vol. 18 (5), pp. e0285664. Date of Electronic Publication: 2023 May 16 (Print Publication: 2023).
نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't
اللغة: English
بيانات الدورية: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE
أسماء مطبوعة: Original Publication: San Francisco, CA : Public Library of Science
مواضيع طبية MeSH: COVID-19*/epidemiology , Sprains and Strains*, Humans ; SARS-CoV-2/genetics ; Genomics ; Russia/epidemiology
مستخلص: In 2020, SARS-CoV-2 has spread rapidly across the globe, with most nations failing to prevent or substantially delay its introduction. While many countries have imposed some limitations on trans-border passenger traffic, the effect of these measures on the global spread of COVID-19 strains remains unclear. Here, we report an analysis of 3206 whole-genome sequences of SARS-CoV-2 samples from 78 regions of Russia covering the period before the spread of variants of concern (between March and November 2020). We describe recurring imports of multiple COVID-19 strains into Russia throughout this period, giving rise to 457 uniquely Russian transmission lineages, as well as repeated cross-border transmissions of local circulating variants out of Russia. While the phylogenetically inferred rate of cross-border transmissions was somewhat reduced during the period of the most stringent border closure, it still remained high, with multiple inferred imports that each led to detectable spread within the country. These results indicate that partial border closure has had little effect on trans-border transmission of variants, which helps explain the rapid global spread of newly arising SARS-CoV-2 variants throughout the pandemic.
Competing Interests: The authors have declared that no competing interests exist.
(Copyright: © 2023 Matsvay et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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SCR Organism: SARS-CoV-2 variants
تواريخ الأحداث: Date Created: 20230516 Date Completed: 20230518 Latest Revision: 20230615
رمز التحديث: 20230615
مُعرف محوري في PubMed: PMC10187899
DOI: 10.1371/journal.pone.0285664
PMID: 37192187
قاعدة البيانات: MEDLINE
الوصف
تدمد:1932-6203
DOI:10.1371/journal.pone.0285664