دورية أكاديمية

A chromosomal reference genome sequence for the malaria mosquito, Anopheles gambiae , Giles, 1902, Ifakara strain.

التفاصيل البيبلوغرافية
العنوان: A chromosomal reference genome sequence for the malaria mosquito, Anopheles gambiae , Giles, 1902, Ifakara strain.
المؤلفون: Habtewold T; Department of Life Sciences, Imperial College London, London, UK., Wagah M; Tree of Life, Wellcome Sanger Institute, Hinxton, UK., Tambwe MM; Vector Control Product Testing Unit, Ifakara Health institute, Bagamoyo, Tanzania., Moore S; Vector Control Product Testing Unit, Ifakara Health institute, Bagamoyo, Tanzania.; Vector Biology Unit, Swiss Tropical and Public Health Institute, Bagamoyo, Tanzania., Windbichler N; Department of Life Sciences, Imperial College London, London, UK., Christophides G; Department of Life Sciences, Imperial College London, London, UK., Johnson H; Scientific Operations, Wellcome Sanger Institute, Hinxton, UK., Heaton H; CSSE, Auburn University, Auburn, Alabama, USA., Collins J; Tree of Life, Wellcome Sanger Institute, Hinxton, UK., Krasheninnikova K; Tree of Life, Wellcome Sanger Institute, Hinxton, UK., Pelan SE; Tree of Life, Wellcome Sanger Institute, Hinxton, UK., Pointon DB; Tree of Life, Wellcome Sanger Institute, Hinxton, UK., Sims Y; Tree of Life, Wellcome Sanger Institute, Hinxton, UK., Torrance JW; Tree of Life, Wellcome Sanger Institute, Hinxton, UK., Tracey A; Tree of Life, Wellcome Sanger Institute, Hinxton, UK., Uliano Da Silva M; Tree of Life, Wellcome Sanger Institute, Hinxton, UK., Wood JM; Tree of Life, Wellcome Sanger Institute, Hinxton, UK., von Wyschetzki K; Tree of Life, Wellcome Sanger Institute, Hinxton, UK., McCarthy SA; Tree of Life, Wellcome Sanger Institute, Hinxton, UK., Neafsey DE; Infectious Disease and Microbiome Program, Broad Institute, Cambridge, Massachusetts, USA.; Department of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA., Makunin A; Tree of Life, Wellcome Sanger Institute, Hinxton, UK., Lawniczak MKN; Tree of Life, Wellcome Sanger Institute, Hinxton, UK., Lawniczak M; Tree of Life, Wellcome Sanger Institute, Hinxton, UK.
مؤلفون مشاركون: Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective
المصدر: Wellcome open research [Wellcome Open Res] 2024 Mar 26; Vol. 8, pp. 74. Date of Electronic Publication: 2024 Mar 26 (Print Publication: 2023).
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: Wellcome Trust Country of Publication: England NLM ID: 101696457 Publication Model: eCollection Cited Medium: Print ISSN: 2398-502X (Print) Linking ISSN: 2398502X NLM ISO Abbreviation: Wellcome Open Res Subsets: PubMed not MEDLINE
أسماء مطبوعة: Original Publication: [London] : Wellcome Trust, [2016]-
مستخلص: We present a genome assembly from an individual female Anopheles gambiae (the malaria mosquito; Arthropoda; Insecta; Diptera; Culicidae), Ifakara strain. The genome sequence is 264 megabases in span. Most of the assembly is scaffolded into three chromosomal pseudomolecules with the X sex chromosome assembled. The complete mitochondrial genome was also assembled and is 15.4 kilobases in length.
Competing Interests: No competing interests were disclosed.
(Copyright: © 2024 Habtewold T et al.)
References: Bioinformatics. 2016 Aug 15;32(16):2508-10. (PMID: 27153597)
J Exp Biol. 2007 Aug;210(Pt 16):2939-47. (PMID: 17690243)
Cell. 2014 Dec 18;159(7):1665-80. (PMID: 25497547)
Gigascience. 2021 Jan 9;10(1):. (PMID: 33420778)
Mol Ecol Resour. 2020 Jul;20(4):892-905. (PMID: 32243090)
BMC Genomics. 2010 Aug 04;11:459. (PMID: 20684766)
Bioinformatics. 2020 May 1;36(9):2896-2898. (PMID: 31971576)
Genome Biol. 2018 Aug 24;19(1):125. (PMID: 30143029)
G3 (Bethesda). 2013 Jul 08;3(7):1191-4. (PMID: 23708298)
Gigascience. 2019 Jun 1;8(6):. (PMID: 31157884)
Genome Biol. 2019 Dec 16;20(1):277. (PMID: 31842948)
Science. 2002 Oct 4;298(5591):129-49. (PMID: 12364791)
Genome Biol. 2007;8(1):R5. (PMID: 17210077)
Bioinformatics. 2015 Oct 1;31(19):3210-2. (PMID: 26059717)
Bioinformatics. 2022 Mar 28;38(7):2049-2051. (PMID: 35020798)
Genetics. 2005 Jan;169(1):185-96. (PMID: 15466420)
Science. 2002 Nov 15;298(5597):1333. (PMID: 12436968)
G3 (Bethesda). 2020 Apr 9;10(4):1361-1374. (PMID: 32071071)
Nat Methods. 2021 Feb;18(2):170-175. (PMID: 33526886)
Genome Res. 2020 Oct;30(10):1533-1546. (PMID: 32989001)
PLoS Comput Biol. 2019 Aug 21;15(8):e1007273. (PMID: 31433799)
ACM BCB. 2018 Aug-Sep;2018:37-46. (PMID: 31080962)
Wellcome Open Res. 2022 Nov 25;7:287. (PMID: 36874567)
Gigascience. 2021 Mar 15;10(3):. (PMID: 33718948)
Bioinformatics. 2022 May 13;38(10):2922-2926. (PMID: 35561173)
معلومات مُعتمدة: United Kingdom WT_ Wellcome Trust; INV-009760 United States GATES Bill & Melinda Gates Foundation
فهرسة مساهمة: Keywords: African malaria mosquito; Anopheles gambiae; chromosomal; genome sequence
تواريخ الأحداث: Date Created: 20230710 Latest Revision: 20240330
رمز التحديث: 20240330
مُعرف محوري في PubMed: PMC10326452
DOI: 10.12688/wellcomeopenres.18854.2
PMID: 37424773
قاعدة البيانات: MEDLINE
الوصف
تدمد:2398-502X
DOI:10.12688/wellcomeopenres.18854.2