Neuronal wiring diagram of an adult brain.

التفاصيل البيبلوغرافية
العنوان: Neuronal wiring diagram of an adult brain.
المؤلفون: Dorkenwald S; Princeton Neuroscience Institute, Princeton University, Princeton, USA.; Computer Science Department, Princeton University, Princeton, USA., Matsliah A; Princeton Neuroscience Institute, Princeton University, Princeton, USA., Sterling AR; Princeton Neuroscience Institute, Princeton University, Princeton, USA.; Eyewire, Boston, USA., Schlegel P; Neurobiology Division, MRC Laboratory of Molecular Biology, Cambridge, UK.; Drosophila Connectomics Group, Department of Zoology, University of Cambridge, Cambridge, UK., Yu SC; Princeton Neuroscience Institute, Princeton University, Princeton, USA., McKellar CE; Princeton Neuroscience Institute, Princeton University, Princeton, USA., Lin A; Princeton Neuroscience Institute, Princeton University, Princeton, USA.; Center for the Physics of Biological Function, Princeton University, Princeton, USA., Costa M; Drosophila Connectomics Group, Department of Zoology, University of Cambridge, Cambridge, UK., Eichler K; Drosophila Connectomics Group, Department of Zoology, University of Cambridge, Cambridge, UK., Yin Y; Drosophila Connectomics Group, Department of Zoology, University of Cambridge, Cambridge, UK., Silversmith W; Princeton Neuroscience Institute, Princeton University, Princeton, USA., Schneider-Mizell C; Allen Institute for Brain Science, Seattle, USA., Jordan CS; Princeton Neuroscience Institute, Princeton University, Princeton, USA., Brittain D; Allen Institute for Brain Science, Seattle, USA., Halageri A; Princeton Neuroscience Institute, Princeton University, Princeton, USA., Kuehner K; Princeton Neuroscience Institute, Princeton University, Princeton, USA., Ogedengbe O; Princeton Neuroscience Institute, Princeton University, Princeton, USA., Morey R; Princeton Neuroscience Institute, Princeton University, Princeton, USA., Gager J; Princeton Neuroscience Institute, Princeton University, Princeton, USA., Kruk K; Eyewire, Boston, USA., Perlman E; Yikes LLC, Baltimore, USA., Yang R; Princeton Neuroscience Institute, Princeton University, Princeton, USA.; Computer Science Department, Princeton University, Princeton, USA., Deutsch D; Princeton Neuroscience Institute, Princeton University, Princeton, USA.; Department of Neurobiology, University of Haifa, Haifa, Israel., Bland D; Princeton Neuroscience Institute, Princeton University, Princeton, USA., Sorek M; Princeton Neuroscience Institute, Princeton University, Princeton, USA.; Eyewire, Boston, USA., Lu R; Princeton Neuroscience Institute, Princeton University, Princeton, USA., Macrina T; Princeton Neuroscience Institute, Princeton University, Princeton, USA.; Computer Science Department, Princeton University, Princeton, USA., Lee K; Princeton Neuroscience Institute, Princeton University, Princeton, USA.; Brain & Cognitive Sciences Department, Massachusetts Institute of Technology, Cambridge, USA., Bae JA; Princeton Neuroscience Institute, Princeton University, Princeton, USA.; Electrical and Computer Engineering Department, Princeton University, Princeton, USA., Mu S; Princeton Neuroscience Institute, Princeton University, Princeton, USA., Nehoran B; Princeton Neuroscience Institute, Princeton University, Princeton, USA.; Computer Science Department, Princeton University, Princeton, USA., Mitchell E; Princeton Neuroscience Institute, Princeton University, Princeton, USA., Popovych S; Princeton Neuroscience Institute, Princeton University, Princeton, USA.; Computer Science Department, Princeton University, Princeton, USA., Wu J; Princeton Neuroscience Institute, Princeton University, Princeton, USA., Jia Z; Princeton Neuroscience Institute, Princeton University, Princeton, USA., Castro M; Princeton Neuroscience Institute, Princeton University, Princeton, USA., Kemnitz N; Princeton Neuroscience Institute, Princeton University, Princeton, USA., Ih D; Princeton Neuroscience Institute, Princeton University, Princeton, USA., Bates AS; Neurobiology Division, MRC Laboratory of Molecular Biology, Cambridge, UK.; Drosophila Connectomics Group, Department of Zoology, University of Cambridge, Cambridge, UK.; Harvard Medical School, Boston, USA.; Centre for Neural Circuits and Behaviour, The University of Oxford, Oxford, UK., Eckstein N; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, USA., Funke J; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, USA., Collman F; Allen Institute for Brain Science, Seattle, USA., Bock DD; Department of Neurological Sciences, Larner College of Medicine, University of Vermont, Burlington, USA., Jefferis GSXE; Neurobiology Division, MRC Laboratory of Molecular Biology, Cambridge, UK.; Drosophila Connectomics Group, Department of Zoology, University of Cambridge, Cambridge, UK., Seung HS; Princeton Neuroscience Institute, Princeton University, Princeton, USA.; Computer Science Department, Princeton University, Princeton, USA., Murthy M; Princeton Neuroscience Institute, Princeton University, Princeton, USA.
مؤلفون مشاركون: FlyWire Consortium
المصدر: BioRxiv : the preprint server for biology [bioRxiv] 2023 Jul 11. Date of Electronic Publication: 2023 Jul 11.
نوع المنشور: Preprint
اللغة: English
بيانات الدورية: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE
مستخلص: Connections between neurons can be mapped by acquiring and analyzing electron microscopic (EM) brain images. In recent years, this approach has been applied to chunks of brains to reconstruct local connectivity maps that are highly informative, yet inadequate for understanding brain function more globally. Here, we present the first neuronal wiring diagram of a whole adult brain, containing 5×10 7 chemical synapses between ~130,000 neurons reconstructed from a female Drosophila melanogaster . The resource also incorporates annotations of cell classes and types, nerves, hemilineages, and predictions of neurotransmitter identities. Data products are available by download, programmatic access, and interactive browsing and made interoperable with other fly data resources. We show how to derive a projectome, a map of projections between regions, from the connectome. We demonstrate the tracing of synaptic pathways and the analysis of information flow from inputs (sensory and ascending neurons) to outputs (motor, endocrine, and descending neurons), across both hemispheres, and between the central brain and the optic lobes. Tracing from a subset of photoreceptors all the way to descending motor pathways illustrates how structure can uncover putative circuit mechanisms underlying sensorimotor behaviors. The technologies and open ecosystem of the FlyWire Consortium set the stage for future large-scale connectome projects in other species.
Competing Interests: Competing interests T. Macrina, K. Lee, S. Popovych, D. Ih, N. Kemnitz, and H. S. Seung declare financial interests in Zetta AI.
References: Elife. 2018 Apr 19;7:. (PMID: 29671739)
Nature. 2014 Mar 13;507(7491):233-7. (PMID: 24598544)
Curr Opin Neurobiol. 2019 Apr;55:188-198. (PMID: 31071619)
Nature. 2021 Jan;589(7840):88-95. (PMID: 33149298)
Nature. 2023 Jan;613(7944):534-542. (PMID: 36599984)
Science. 2023 Mar 10;379(6636):eadd9330. (PMID: 36893230)
Nat Commun. 2023 Sep 11;14(1):5572. (PMID: 37696814)
Elife. 2016 Apr 15;5:. (PMID: 27083044)
Curr Biol. 2015 May 18;25(10):1249-58. (PMID: 25866397)
Neuron. 2014 May 21;82(4):887-95. (PMID: 24853944)
Elife. 2017 Apr 22;6:. (PMID: 28432786)
Nat Methods. 2012 Jun 10;9(7):717-20. (PMID: 22688414)
J Neurosci. 2016 Nov 16;36(46):11768-11780. (PMID: 27852783)
Elife. 2018 Dec 11;7:. (PMID: 30526854)
Neuron. 2022 May 18;110(10):1700-1711.e6. (PMID: 35290791)
Proc Natl Acad Sci U S A. 2013 Jun 18;110(25):10294-9. (PMID: 23729809)
Genetics. 2010 Oct;186(2):735-55. (PMID: 20697123)
Curr Biol. 2023 Sep 25;33(18):3896-3910.e7. (PMID: 37673068)
Curr Opin Neurobiol. 1999 Oct;9(5):634-9. (PMID: 10508748)
Elife. 2020 Dec 14;9:. (PMID: 33315010)
Neuron. 2014 Feb 05;81(3):603-615. (PMID: 24507194)
Elife. 2021 Dec 16;10:. (PMID: 34913436)
Elife. 2022 Jul 06;11:. (PMID: 35791902)
Elife. 2020 Nov 23;9:. (PMID: 33225998)
Elife. 2020 Sep 07;9:. (PMID: 32880371)
Cereb Cortex. 1991 Jan-Feb;1(1):1-47. (PMID: 1822724)
Neural Comput. 2010 Feb;22(2):511-38. (PMID: 19922289)
Nat Methods. 2007 Apr;4(4):307-8. (PMID: 17396125)
Elife. 2020 Sep 21;9:. (PMID: 32955437)
Elife. 2016 Mar 18;5:. (PMID: 26990779)
Science. 1955 Apr 1;121(3144):447-9. (PMID: 14358669)
Curr Biol. 2022 Mar 14;32(5):1131-1149.e7. (PMID: 35139358)
Curr Biol. 2022 Aug 22;32(16):3529-3544.e2. (PMID: 35839763)
Brain Res Rev. 2006 Aug 30;52(1):1-57. (PMID: 16469387)
Curr Biol. 2010 Sep 28;20(18):1589-601. (PMID: 20832311)
Sci Adv. 2022 Feb 18;8(7):eabm7723. (PMID: 35179957)
PLoS Genet. 2020 Feb 25;16(2):e1008609. (PMID: 32097408)
PLoS Comput Biol. 2011 Feb 03;7(2):e1001066. (PMID: 21304930)
Neuron. 2020 Dec 23;108(6):1045-1057.e6. (PMID: 33125872)
Elife. 2023 Feb 23;12:. (PMID: 36820523)
Nature. 2021 Mar;591(7848):111-116. (PMID: 33442056)
Elife. 2017 May 13;6:. (PMID: 28500755)
Nature. 2012 Oct 11;490(7419):258-61. (PMID: 23060195)
Neuron. 2014 Feb 19;81(4):755-65. (PMID: 24559671)
Elife. 2020 Apr 14;9:. (PMID: 32286229)
Nat Methods. 2021 Jul;18(7):771-774. (PMID: 34168373)
Science. 2003 Apr 11;300(5617):286-90. (PMID: 12690187)
Elife. 2021 Feb 22;10:. (PMID: 33616035)
Neuron. 2015 Feb 4;85(3):573-89. (PMID: 25619655)
Nat Commun. 2023 Feb 24;14(1):1052. (PMID: 36828820)
Nat Methods. 2017 Apr;14(4):435-442. (PMID: 28250467)
Elife. 2021 May 25;10:. (PMID: 34032214)
J Exp Biol. 2018 May 20;221(Pt 10):. (PMID: 29784759)
Cell. 2018 Jul 26;174(3):730-743.e22. (PMID: 30033368)
Nat Neurosci. 2015 Aug;18(8):1067-76. (PMID: 26120965)
Nat Neurosci. 2014 Apr;17(4):559-68. (PMID: 24561998)
Nature. 2021 Mar;591(7848):105-110. (PMID: 33627874)
J Comp Neurol. 2020 Aug;528(12):2068-2098. (PMID: 32012264)
PLoS Comput Biol. 2005 Sep;1(4):e42. (PMID: 16201007)
J Neurosci. 2011 Jun 1;31(22):8181-93. (PMID: 21632940)
J Comp Physiol A Neuroethol Sens Neural Behav Physiol. 2002 Jul;188(6):455-67. (PMID: 12122464)
Elife. 2023 Apr 17;12:. (PMID: 37067152)
Elife. 2016 Dec 28;5:. (PMID: 28029094)
Elife. 2022 Apr 20;11:. (PMID: 35442190)
Neuron. 2008 Sep 25;59(6):1009-23. (PMID: 18817738)
Front Neural Circuits. 2009 Jul 01;3:5. (PMID: 19597562)
Nat Methods. 2018 Aug;15(8):605-610. (PMID: 30013046)
Proc Natl Acad Sci U S A. 2015 Jun 2;112(22):E2967-76. (PMID: 25964354)
Nature. 2019 Jul;571(7763):63-71. (PMID: 31270481)
Curr Biol. 2019 May 6;29(9):1545-1550.e2. (PMID: 31031119)
Curr Biol. 2022 Aug 8;32(15):3317-3333.e7. (PMID: 35793679)
Elife. 2022 Oct 26;11:. (PMID: 36286237)
Nature. 2022 Jan;601(7891):98-104. (PMID: 34912123)
Nature. 2021 Jan;589(7843):577-581. (PMID: 33239786)
Curr Biol. 2022 Aug 8;32(15):3334-3349.e6. (PMID: 35797998)
Cell. 2018 May 17;173(5):1293-1306.e19. (PMID: 29775596)
Elife. 2021 Sep 02;10:. (PMID: 34473057)
Nature. 2015 Apr 30;520(7549):633-9. (PMID: 25896325)
Elife. 2022 Nov 16;11:. (PMID: 36382887)
Arthropod Struct Dev. 2011 Jul;40(4):368-79. (PMID: 21371566)
Brain Res Brain Res Rev. 2004 Dec;47(1-3):191-215. (PMID: 15572172)
Philos Trans R Soc Lond B Biol Sci. 1986 Nov 12;314(1165):1-340. (PMID: 22462104)
Elife. 2019 Jan 09;8:. (PMID: 30624205)
Curr Biol. 2011 Jan 11;21(1):1-11. (PMID: 21129968)
Scan Electron Microsc. 1981;(Pt 2):73-6. (PMID: 7323733)
Curr Opin Neurobiol. 2019 Jun;56:125-134. (PMID: 30703584)
Science. 2022 Jul 8;377(6602):eabo0924. (PMID: 35737810)
J Neurosci. 2007 Feb 21;27(8):1992-2000. (PMID: 17314295)
Nature. 2013 Aug 8;500(7461):175-81. (PMID: 23925240)
Cell. 2014 Feb 27;156(5):1096-111. (PMID: 24581503)
Neuron. 2006 Nov 9;52(3):425-36. (PMID: 17088209)
Curr Opin Neurobiol. 2012 Feb;22(1):154-61. (PMID: 22119321)
Proc Natl Acad Sci U S A. 2020 Dec 29;117(52):33570-33577. (PMID: 33318182)
Elife. 2021 Oct 26;10:. (PMID: 34696823)
Cell. 2021 Feb 4;184(3):759-774.e18. (PMID: 33400916)
Glia. 2017 Apr;65(4):606-638. (PMID: 28133822)
Brain. 1998 Jun;121 ( Pt 6):1013-52. (PMID: 9648540)
Cell. 2018 Aug 9;174(4):982-998.e20. (PMID: 29909982)
Cell Rep. 2018 Nov 20;25(8):2017-2026.e3. (PMID: 30463000)
Elife. 2021 Dec 29;10:. (PMID: 34964714)
Cell. 2022 Mar 17;185(6):1082-1100.e24. (PMID: 35216674)
Elife. 2019 Jul 02;8:. (PMID: 31264962)
Cell. 2017 Jan 12;168(1-2):280-294.e12. (PMID: 28065412)
Nature. 2013 May 2;497(7447):113-7. (PMID: 23615618)
Nature. 2021 Aug;596(7871):257-261. (PMID: 34349261)
Nature. 2021 Oct;598(7879):86-102. (PMID: 34616075)
Elife. 2020 Nov 03;9:. (PMID: 33141021)
Nat Methods. 2020 Jan;17(1):68-71. (PMID: 31740820)
Elife. 2020 Jan 15;9:. (PMID: 31939737)
Neuron. 2004 Sep 2;43(5):609-17. (PMID: 15339643)
Nature. 2014 Apr 10;508(7495):207-14. (PMID: 24695228)
Nature. 2014 May 15;509(7500):331-336. (PMID: 24805243)
PLoS Biol. 2004 Nov;2(11):e329. (PMID: 15514700)
Science. 2011 Nov 4;334(6056):618-23. (PMID: 22053041)
Elife. 2019 Sep 19;8:. (PMID: 31535971)
Cereb Cortex. 2014 Jan;24(1):17-36. (PMID: 23010748)
Nature. 2023 Jan;613(7944):543-549. (PMID: 36418404)
Glia. 2019 Jan;67(1):5-26. (PMID: 30443934)
Trends Neurosci. 1995 Nov;18(11):471-4. (PMID: 8592750)
Curr Opin Neurobiol. 2018 Apr;49:51-58. (PMID: 29258011)
Cell. 2000 Nov 22;103(5):805-13. (PMID: 11114336)
J Neurogenet. 1989 May;5(2):127-53. (PMID: 2500507)
J Comp Neurol. 1989 Aug 22;286(4):442-55. (PMID: 2778101)
J Comp Neurol. 2006 Aug 20;497(6):928-58. (PMID: 16802334)
J Neurosci. 1991 Jan;11(1):1-22. (PMID: 1986064)
Curr Opin Neurobiol. 2022 Apr;73:102514. (PMID: 35196623)
J Neurosci. 2008 Mar 19;28(12):2959-64. (PMID: 18353998)
Curr Biol. 2020 Aug 17;30(16):3183-3199.e6. (PMID: 32619485)
Nat Neurosci. 2021 Jan;24(1):93-104. (PMID: 33230320)
Nat Methods. 2022 Jan;19(1):119-128. (PMID: 34949809)
Cell. 2020 Sep 17;182(6):1372-1376. (PMID: 32946777)
Nature. 2019 Nov;575(7781):195-202. (PMID: 31666704)
Nat Rev Neurosci. 2016 Jan;17(1):61-72. (PMID: 26675821)
معلومات مُعتمدة: R35 NS111580 United States NS NINDS NIH HHS; RF1 NS121911 United States NS NINDS NIH HHS; United Kingdom WT_ Wellcome Trust; U24 NS126935 United States NS NINDS NIH HHS; RF1 MH129268 United States MH NIMH NIH HHS; RF1 MH120679 United States MH NIMH NIH HHS; RF1 MH117815 United States MH NIMH NIH HHS
تواريخ الأحداث: Date Created: 20230710 Latest Revision: 20240419
رمز التحديث: 20240419
مُعرف محوري في PubMed: PMC10327113
DOI: 10.1101/2023.06.27.546656
PMID: 37425937
قاعدة البيانات: MEDLINE
الوصف
DOI:10.1101/2023.06.27.546656