دورية أكاديمية

Genome-Wide Investigation of BAM Gene Family in Annona atemoya : Evolution and Expression Network Profiles during Fruit Ripening.

التفاصيل البيبلوغرافية
العنوان: Genome-Wide Investigation of BAM Gene Family in Annona atemoya : Evolution and Expression Network Profiles during Fruit Ripening.
المؤلفون: Wang L; Key Laboratory of Tropical Fruit Biology, Ministry of Agriculture and Rural Affairs, South Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Zhanjiang 524091, China.; Key Laboratory of Hainan Province for Postharvest Physiology and Technology of Tropical Horticultural Products, South Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Zhanjiang 524091, China., Jing M; Key Laboratory of Tropical Fruit Biology, Ministry of Agriculture and Rural Affairs, South Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Zhanjiang 524091, China.; Key Laboratory of Hainan Province for Postharvest Physiology and Technology of Tropical Horticultural Products, South Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Zhanjiang 524091, China., Gu S; Key Laboratory of Tropical Fruit Biology, Ministry of Agriculture and Rural Affairs, South Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Zhanjiang 524091, China.; Key Laboratory of Hainan Province for Postharvest Physiology and Technology of Tropical Horticultural Products, South Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Zhanjiang 524091, China., Li D; Key Laboratory of Tropical Fruit Biology, Ministry of Agriculture and Rural Affairs, South Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Zhanjiang 524091, China.; Key Laboratory of Hainan Province for Postharvest Physiology and Technology of Tropical Horticultural Products, South Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Zhanjiang 524091, China., Dai X; Key Laboratory of Tropical Fruit Biology, Ministry of Agriculture and Rural Affairs, South Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Zhanjiang 524091, China.; Key Laboratory of Hainan Province for Postharvest Physiology and Technology of Tropical Horticultural Products, South Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Zhanjiang 524091, China., Chen Z; Key Laboratory of Tropical Fruit Biology, Ministry of Agriculture and Rural Affairs, South Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Zhanjiang 524091, China.; Key Laboratory of Hainan Province for Postharvest Physiology and Technology of Tropical Horticultural Products, South Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Zhanjiang 524091, China., Chen J; Key Laboratory of Tropical Fruit Biology, Ministry of Agriculture and Rural Affairs, South Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Zhanjiang 524091, China.; Key Laboratory of Hainan Province for Postharvest Physiology and Technology of Tropical Horticultural Products, South Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Zhanjiang 524091, China.
المصدر: International journal of molecular sciences [Int J Mol Sci] 2023 Jun 22; Vol. 24 (13). Date of Electronic Publication: 2023 Jun 22.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067 (Electronic) Linking ISSN: 14220067 NLM ISO Abbreviation: Int J Mol Sci Subsets: MEDLINE
أسماء مطبوعة: Original Publication: Basel, Switzerland : MDPI, [2000-
مواضيع طبية MeSH: Annona*/genetics , Annona*/metabolism , beta-Amylase*/genetics , beta-Amylase*/metabolism, Fruit/genetics ; Fruit/metabolism ; Starch/genetics ; Starch/metabolism ; Gene Expression Regulation, Plant ; Plant Proteins/genetics ; Plant Proteins/metabolism
مستخلص: β-amylase proteins (BAM) are important to many aspects of physiological process such as starch degradation. However, little information was available about the BAM genes in Annona atemoya , an important tropical fruit. Seven BAM genes containing the conservative domain of glycoside hydrolase family 14 (PF01373) were identified with Annona atemoya genome, and these BAM genes can be divided into four groups. Subcellular localization analysis revealed that AaBAM3 and AaBAM9 were located in the chloroplast, and AaBAM1.2 was located in the cell membrane and the chloroplast. The AaBAMs belonging to Subfamily I contribute to starch degradation have the higher expression than those belonging to Subfamily II. The analysis of the expression showed that AaBAM3 may function in the whole fruit ripening process, and AaBAM1.2 may be important to starch degradation in other organs. Temperature and ethylene affect the expression of major AaBAM genes in Subfamily I during fruit ripening. These expressions and subcellular localization results indicating β-amylase play an important role in starch degradation.
References: Annu Rev Plant Physiol Plant Mol Biol. 2001 Jun;52:725-749. (PMID: 11337414)
Plant J. 2002 Jun;30(5):581-91. (PMID: 12047632)
Plant Cell. 2008 Apr;20(4):1040-58. (PMID: 18390594)
Plant J. 2005 Dec;44(5):730-43. (PMID: 16297066)
Cell. 2005 Jan 28;120(2):249-59. (PMID: 15680330)
Plant Physiol. 2000 Aug;123(4):1583-92. (PMID: 10938374)
Plant Cell. 2016 Aug;28(8):1860-78. (PMID: 27436713)
Mol Biol Rep. 2021 Sep;48(9):6503-6511. (PMID: 34379288)
Science. 2004 Jan 2;303(5654):87-9. (PMID: 14704427)
Proc Natl Acad Sci U S A. 1989 Aug;86(15):5830-3. (PMID: 16594057)
J Exp Bot. 2011 Jan;62(2):545-55. (PMID: 20876336)
BMC Genomics. 2018 Jun 25;19(1):490. (PMID: 29940851)
Plant Physiol. 2014 Dec;166(4):1748-63. (PMID: 25293962)
Plant Cell. 2020 Jul;32(7):2325-2344. (PMID: 32354788)
Plant Sci. 2018 Nov;276:163-170. (PMID: 30348315)
J Exp Bot. 2017 Apr 1;68(9):2317-2331. (PMID: 28369567)
Plant Physiol. 1995 Mar;107(3):895-904. (PMID: 7716246)
Annu Rev Plant Biol. 2010;61:681-704. (PMID: 20192752)
Plant Cell. 2017 Feb;29(2):207-228. (PMID: 28138016)
Planta. 2001 Apr;212(5-6):823-8. (PMID: 11346957)
Plant J. 1999 Dec;20(5):519-27. (PMID: 10652124)
Biochem J. 1991 Dec 1;280 ( Pt 2):309-16. (PMID: 1747104)
Plant Mol Biol. 2016 Nov;92(4-5):539-553. (PMID: 27539000)
Plant Physiol. 2017 Dec;175(4):1525-1535. (PMID: 29066669)
Curr Biol. 2016 Feb 8;26(3):362-70. (PMID: 26774787)
Plant Direct. 2020 Feb 11;4(2):e00199. (PMID: 32072133)
Nucleic Acids Res. 2009 Jul;37(Web Server issue):W202-8. (PMID: 19458158)
Plant Physiol. 1988 Jan;86(1):251-9. (PMID: 16665876)
Proc Natl Acad Sci U S A. 1995 Jul 18;92(15):7090-4. (PMID: 7624375)
Nucleic Acids Res. 2014 Jan;42(Database issue):D490-5. (PMID: 24270786)
Plant Physiol. 2018 Oct;178(2):850-863. (PMID: 30135096)
معلومات مُعتمدة: No.31901967 National Natural Science Foundation of China; No.2023A1515010190 Natural Science Foundation of Guangdong Province; No.1630062022001 Central Public-interest Scientific Institution Basal Research Fund for Chinese Academy of Tropical Agricultural Sciences
فهرسة مساهمة: Keywords: Annona atemoya; fruit ripening; β-amylase proteins
المشرفين على المادة: EC 3.2.1.2 (beta-Amylase)
9005-25-8 (Starch)
0 (Plant Proteins)
تواريخ الأحداث: Date Created: 20230714 Date Completed: 20230717 Latest Revision: 20230718
رمز التحديث: 20240628
مُعرف محوري في PubMed: PMC10341951
DOI: 10.3390/ijms241310516
PMID: 37445694
قاعدة البيانات: MEDLINE
الوصف
تدمد:1422-0067
DOI:10.3390/ijms241310516