دورية أكاديمية
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14th century Yersinia pestis genomes support emergence of pestis secunda within Europe.

التفاصيل البيبلوغرافية
العنوان: 14th century Yersinia pestis genomes support emergence of pestis secunda within Europe.
المؤلفون: Parker CE; Max Planck Institute for the Science of Human History, Jena, Germany., Hiss AN; Max Planck Institute for the Science of Human History, Jena, Germany.; Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany., Spyrou MA; Max Planck Institute for the Science of Human History, Jena, Germany.; Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany.; Institute for Achaeological Sciences, University of Tübingen, Tübingen, Germany., Neumann GU; Max Planck Institute for the Science of Human History, Jena, Germany.; Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany., Slavin P; Division of History, Heritage and Politics, University of Stirling, Stirling, Scotland, United Kingdom., Nelson EA; Max Planck Institute for the Science of Human History, Jena, Germany., Nagel S; Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany., Dalidowski X; Landesamt für Denkmalpflege und Archäologie, Sachsen-Anhalt, Halle (Saale), Germany., Friederich S; Landesamt für Denkmalpflege und Archäologie, Sachsen-Anhalt, Halle (Saale), Germany., Krause J; Max Planck Institute for the Science of Human History, Jena, Germany.; Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany., Herbig A; Max Planck Institute for the Science of Human History, Jena, Germany.; Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany., Haak W; Max Planck Institute for the Science of Human History, Jena, Germany.; Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany., Bos KI; Max Planck Institute for the Science of Human History, Jena, Germany.; Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany.
المصدر: PLoS pathogens [PLoS Pathog] 2023 Jul 18; Vol. 19 (7), pp. e1011404. Date of Electronic Publication: 2023 Jul 18 (Print Publication: 2023).
نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't
اللغة: English
بيانات الدورية: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238921 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7374 (Electronic) Linking ISSN: 15537366 NLM ISO Abbreviation: PLoS Pathog Subsets: MEDLINE
أسماء مطبوعة: Original Publication: San Francisco, CA : Public Library of Science, c2005-
مواضيع طبية MeSH: Yersinia pestis*/genetics , Plague*/epidemiology, Humans ; DNA, Bacterial/genetics ; Genome, Bacterial ; Europe/epidemiology ; Phylogeny
مستخلص: Pestis secunda (1356-1366 CE) is the first of a series of plague outbreaks in Europe that followed the Black Death (1346-1353 CE). Collectively this period is called the Second Pandemic. From a genomic perspective, the majority of post-Black Death strains of Yersinia pestis thus far identified in Europe display diversity accumulated over a period of centuries that form a terminal sub-branch of the Y. pestis phylogeny. It has been debated if these strains arose from local evolution of Y. pestis or if the disease was repeatedly reintroduced from an external source. Plague lineages descended from the pestis secunda, however, are thought to have persisted in non-human reservoirs outside Europe, where they eventually gave rise to the Third Pandemic (19th and 20th centuries). Resolution of competing hypotheses on the origins of the many post-Black Death outbreaks has been hindered in part by the low representation of Y. pestis genomes in archaeological specimens, especially for the pestis secunda. Here we report on five individuals from Germany that were infected with lineages of plague associated with the pestis secunda. For the two genomes of high coverage, one groups within the known diversity of genotypes associated with the pestis secunda, while the second carries an ancestral genotype that places it earlier. Through consideration of historical sources that explore first documentation of the pandemic in today's Central Germany, we argue that these data provide robust evidence to support a post-Black Death evolution of the pathogen within Europe rather than a re-introduction from outside. Additionally, we demonstrate retrievability of Y. pestis DNA in post-cranial remains and highlight the importance of hypothesis-free pathogen screening approaches in evaluations of archaeological samples.
Competing Interests: The authors have no conflicts of interest to report.
(Copyright: © 2023 Parker et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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المشرفين على المادة: 0 (DNA, Bacterial)
تواريخ الأحداث: Date Created: 20230718 Date Completed: 20230814 Latest Revision: 20230814
رمز التحديث: 20240628
مُعرف محوري في PubMed: PMC10414589
DOI: 10.1371/journal.ppat.1011404
PMID: 37463152
قاعدة البيانات: MEDLINE
الوصف
تدمد:1553-7374
DOI:10.1371/journal.ppat.1011404