دورية أكاديمية
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Whole Genome Screening Procures a Holistic Hold of the Russian Chicken Gene Pool Heritage and Demographic History.

التفاصيل البيبلوغرافية
العنوان: Whole Genome Screening Procures a Holistic Hold of the Russian Chicken Gene Pool Heritage and Demographic History.
المؤلفون: Romanov MN; L. K. Ernst Federal Research Center for Animal Husbandry, Dubrovitsy, Podolsk 142132, Moscow Oblast, Russia.; School of Biosciences, University of Kent, Canterbury CT2 7NJ, Kent, UK., Abdelmanova AS; L. K. Ernst Federal Research Center for Animal Husbandry, Dubrovitsy, Podolsk 142132, Moscow Oblast, Russia., Fisinin VI; Center 'All-Russian Poultry Research and Technological Institute' of the Russian Academy of Sciences, Sergiev Posad 141311, Moscow Oblast, Russia., Gladyr EA; L. K. Ernst Federal Research Center for Animal Husbandry, Dubrovitsy, Podolsk 142132, Moscow Oblast, Russia., Volkova NA; L. K. Ernst Federal Research Center for Animal Husbandry, Dubrovitsy, Podolsk 142132, Moscow Oblast, Russia., Anshakov DV; Breeding and Genetic Center 'Zagorsk Experimental Breeding Farm'-Branch of the Federal Research Centre 'All-Russian Poultry Research and Technological Institute' of the Russian Academy of Sciences, Sergiev Posad 141311, Moscow Oblast, Russia., Stanishevskaya OI; Russian Research Institute of Farm Animal Genetics and Breeding-Branch of the L. K. Ernst Federal Research Center for Animal Husbandry, Pushkin, Saint Petersburg 196601, Russia., Vakhrameev AB; Russian Research Institute of Farm Animal Genetics and Breeding-Branch of the L. K. Ernst Federal Research Center for Animal Husbandry, Pushkin, Saint Petersburg 196601, Russia., Dotsev AV; L. K. Ernst Federal Research Center for Animal Husbandry, Dubrovitsy, Podolsk 142132, Moscow Oblast, Russia., Griffin DK; School of Biosciences, University of Kent, Canterbury CT2 7NJ, Kent, UK., Zinovieva NA; L. K. Ernst Federal Research Center for Animal Husbandry, Dubrovitsy, Podolsk 142132, Moscow Oblast, Russia.
المصدر: Biology [Biology (Basel)] 2023 Jul 10; Vol. 12 (7). Date of Electronic Publication: 2023 Jul 10.
نوع المنشور: Journal Article
اللغة: English
بيانات الدورية: Publisher: MDPI Country of Publication: Switzerland NLM ID: 101587988 Publication Model: Electronic Cited Medium: Print ISSN: 2079-7737 (Print) Linking ISSN: 20797737 NLM ISO Abbreviation: Biology (Basel) Subsets: PubMed not MEDLINE
أسماء مطبوعة: Original Publication: Basel, Switzerland : MDPI, 2012-
مستخلص: A study for genomic variation that may reflect putative selective signaling and be associated with economically important traits is instrumental for obtaining information about demographic and selection history in domestic animal species and populations. A rich variety of the Russian chicken gene pool breeds warrants a further detailed study. Specifically, their genomic features can derive implications from their genome architecture and selective footprints for their subsequent breeding and practical efficient exploitation. In the present work, whole genome genotyping of 19 chicken breeds (20 populations with up to 71 samples each) was performed using the Chicken 50 K BeadChip DNA chip. The studied breed sample included six native Russian breeds of chickens developed in the 17th-19th centuries, as well as eight Russian chicken breeds, including the Russian White (RW), created in the 20th century on the basis of improving local chickens using breeds of foreign selection. Five specialized foreign breeds of chickens, including the White Leghorn (WL), were used along with other breeds representing the Russian gene pool. The characteristics of the genetic diversity and phylogenetic relationships of the native breeds of chickens were represented in comparison with foreign breeds. It was established that the studied native breeds demonstrate their own genetic structure that distinguishes them from foreign breeds, and from each other. For example, we previously made an assumption on what could cause the differences between two RW populations, RW1 and RW2. From the data obtained here, it was verified that WL was additionally crossed to RW2, unlike RW1. Thus, inherently, RW1 is a purer population of this improved Russian breed. A significant contribution of the gene pool of native breeds to the global genetic diversity of chickens was shown. In general, based on the results of a multilateral survey of this sample of breeds, it can be concluded that phylogenetic relationships based on their genetic structure and variability robustly reflect the known, previously postulated and newly discovered patterns of evolution of native chickens. The results herein presented will aid selection and breeding work using this gene pool.
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معلومات مُعتمدة: 21-66-00007 Russian Science Foundation; 075-15-2021-1037 (Internal No. 15.BRK.21.0001) Ministry of Science and Higher Education of the Russian Federation
فهرسة مساهمة: Keywords: Russian gene pool breeds; SNPs; chicken; demographic history; genetic diversity; phylogenetic relationships; whole genome screening
تواريخ الأحداث: Date Created: 20230729 Latest Revision: 20230731
رمز التحديث: 20231215
مُعرف محوري في PubMed: PMC10376169
DOI: 10.3390/biology12070979
PMID: 37508409
قاعدة البيانات: MEDLINE
الوصف
تدمد:2079-7737
DOI:10.3390/biology12070979